RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 TMCC3Q9ULS5 477 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 WDR90Q96KV7 1748 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 CIAO1O76071 339 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 PIK3CAP42336 1068 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 AMPHP49418 695 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 GTF2A2P52657 109 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 SLC20A2Q08357 652 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 CCDC70Q6NSX1 233 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 KSR2Q6VAB6 950 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 RTL10Q7L3V2 364 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 MYO1HQ8N1T3 1032 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 CLASRPQ8N2M8 674 aaKnown RBP4.64□□□□□ -1.67
MCF2-203ENST00000370576 ARL6IP6Q8N6S5 226 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 FAM200AQ8TCP9 573 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 SH3KBP1Q96B97 665 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 FEZ1Q99689 392 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 RASSF1Q9NS23 344 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 ADGRG1Q9Y653 693 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 MED23Q9ULK4 1368 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 KRT18P05783 430 aaKnown RBP4.64□□□□□ -1.67
MCF2-203ENST00000370576 ETFBP38117 255 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 STAT3P40763 770 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 GEMIN4P57678 1058 aaKnown RBP4.64□□□□□ -1.67
MCF2-203ENST00000370576 FOXO4P98177 505 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 LAMC2Q13753 1193 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 FAM133BQ5BKY9 247 aaKnown RBP4.64□□□□□ -1.67
MCF2-203ENST00000370576 SPOCD1Q6ZMY3 1216 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 CBARPQ8N350 705 aaPredicted RBP4.64□□□□□ -1.67
MCF2-203ENST00000370576 UPF1Q92900 1129 aaKnown RBP eCLIP4.64□□□□□ -1.67
MCF2-203ENST00000370576 MAP3K14Q99558 947 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 CSRNP2Q9H175 543 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 STRN4Q9NRL3 753 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 DBF4Q9UBU7 674 aaPredicted RBP4.64□□□□□ -1.67
MCF2-203ENST00000370576 ZMYM6O95789 1325 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 SBF1O95248 1867 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 COL2A1P02458 1487 aaPredicted RBP4.63□□□□□ -1.67
MCF2-203ENST00000370576 MYH2Q9UKX2 1941 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 SLC27A2O14975 620 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 AKAP10O43572 662 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 RRP9O43818 475 aaKnown RBP4.63□□□□□ -1.67
MCF2-203ENST00000370576 SORBS3O60504 671 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 INTS5Q6P9B9 1019 aaKnown RBP4.63□□□□□ -1.67
MCF2-203ENST00000370576 G2E3Q7L622 706 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 ZNF34Q8IZ26 560 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 VGLL2Q8N8G2 317 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 GIMAP8Q8ND71 665 aaPredicted RBP4.63□□□□□ -1.67
MCF2-203ENST00000370576 CABLES1Q8TDN4 633 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 MPP4Q96JB8 637 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 DEPDC7Q96QD5 511 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 METTL22Q9BUU2 404 aaPredicted RBP4.63□□□□□ -1.67
MCF2-203ENST00000370576 PCDHGB7Q9Y5F8 929 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 ANO9A1A5B4 782 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 ARIH2O95376 493 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 POTEIP0CG38 1075 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 CYP19A1P11511 503 aaPredicted RBP4.63□□□□□ -1.67
MCF2-203ENST00000370576 ADD2P35612 726 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 RAB27AP51159 221 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 GNL2Q13823 731 aaKnown RBP4.63□□□□□ -1.67
MCF2-203ENST00000370576 ALKBH2Q6NS38 261 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 GALNT5Q7Z7M9 940 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 UNC5CLQ8IV45 518 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 GTF3C2Q8WUA4 911 aaPredicted RBP4.63□□□□□ -1.67
MCF2-203ENST00000370576 SNX21Q969T3 373 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 SKA1Q96BD8 255 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 TEX13AQ9BXU3 409 aaPredicted RBP4.63□□□□□ -1.67
MCF2-203ENST00000370576 C22orf23Q9BZE7 217 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 COPRSQ9NQ92 184 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 ATP6V0A2Q9Y487 856 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 ATAD5Q96QE3 1844 aa4.63□□□□□ -1.67
MCF2-203ENST00000370576 USP17L5A8MUK1 530 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 FZD6O60353 706 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 TATP17735 454 aaPredicted RBP4.62□□□□□ -1.67
MCF2-203ENST00000370576 HALP42357 657 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 TSGA10IPQ3SY00 556 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 TUBB8Q3ZCM7 444 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 MAGEB6Q8N7X4 407 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 PLBD2Q8NHP8 589 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 PI4K2BQ8TCG2 481 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 ZBTB10Q96DT7 871 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 RRP7AQ9Y3A4 280 aaKnown RBP4.62□□□□□ -1.67
MCF2-203ENST00000370576 PABPN1LA6NDY0 278 aaKnown RBP4.62□□□□□ -1.67
MCF2-203ENST00000370576 ABLIM3O94929 683 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 WEE1P30291 646 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 SOX9P48436 509 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 COPAP53621 1224 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 SFSWAPQ12872 951 aaKnown RBP4.62□□□□□ -1.67
MCF2-203ENST00000370576 MZT2BQ6NZ67 158 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 LARP1Q6PKG0 1096 aaKnown RBP4.62□□□□□ -1.67
MCF2-203ENST00000370576 POTEAQ6S8J7 498 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 C15orf52Q6ZUT6 534 aaKnown RBP4.62□□□□□ -1.67
MCF2-203ENST00000370576 C16orf86Q6ZW13 317 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 DDX42Q86XP3 938 aaKnown RBP eCLIP4.62□□□□□ -1.67
MCF2-203ENST00000370576 PPHLN1Q8NEY8 458 aaKnown RBP4.62□□□□□ -1.67
MCF2-203ENST00000370576 LINS1Q8NG48 757 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 PANK1Q8TE04 598 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 NLRP7Q8WX94 980 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 BAP1Q92560 729 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 CCDC47Q96A33 483 aaKnown RBP4.62□□□□□ -1.67
MCF2-203ENST00000370576 CENPTQ96BT3 561 aa4.62□□□□□ -1.67
MCF2-203ENST00000370576 PPCSQ9HAB8 311 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms