RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ST13P5Q8NFI4 369 aaPredicted RBP8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 WFDC12Q8WWY7 111 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 DHRS1Q96LJ7 313 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 UBL7Q96S82 380 aaPredicted RBP8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 KANSL2Q9H9L4 492 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 SUCOQ9UBS9 1254 aaKnown RBP8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 PFDN2Q9UHV9 154 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 DAGLAQ9Y4D2 1042 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 ENPP3O14638 875 aa8.15□□□□□ -1.1
RNU4-39P-201ENST00000362455 HSD3B2P26439 372 aa8.15□□□□□ -1.1
RNU4-39P-201ENST00000362455 PMS1P54277 932 aaKnown RBP8.15□□□□□ -1.1
RNU4-39P-201ENST00000362455 CHMP4BP1P59074 171 aa8.15□□□□□ -1.1
RNU4-39P-201ENST00000362455 PPFIBP1Q86W92 1011 aa8.15□□□□□ -1.1
RNU4-39P-201ENST00000362455 FAM46AQ96IP4 442 aaKnown RBP8.15□□□□□ -1.1
RNU4-39P-201ENST00000362455 SEMA6CQ9H3T2 930 aa8.15□□□□□ -1.1
RNU4-39P-201ENST00000362455 FAM86C1Q9NVL1 165 aa8.15□□□□□ -1.1
RNU4-39P-201ENST00000362455 ERICH3Q5RHP9 1530 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 SUSD5O60279 629 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 DIAPH1O60610 1272 aaKnown RBP8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 MBTPS1Q14703 1052 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 BBS9Q3SYG4 887 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 SGO2Q562F6 1265 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 TDRD10Q5VZ19 366 aaKnown RBP8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 MFSD2AQ8NA29 543 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 PPP1R13LQ8WUF5 828 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 FBLIM1Q8WUP2 373 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 PUS7Q96PZ0 661 aaKnown RBP8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 LGR6Q9HBX8 967 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 ZMYM5Q9UJ78 669 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 TOP2BQ02880 1626 aa8.14□□□□□ -1.11
RNU4-39P-201ENST00000362455 KDM2BQ8NHM5 1336 aa8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 ANKRD62A6NC57 917 aa8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 C9IYK1 514 aa8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 CLEC3AO75596 197 aa8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 TP53P04637 393 aaPredicted RBP8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 NFICP08651 508 aa8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 SSRP1Q08945 709 aaKnown RBP8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 ADGRE1Q14246 886 aa8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 ZNF669Q96BR6 464 aaPredicted RBP8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 YIPF2Q9BWQ6 316 aa8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.13□□□□□ -1.11
RNU4-39P-201ENST00000362455 SBNO2Q9Y2G9 1366 aa8.12□□□□□ -1.11
RNU4-39P-201ENST00000362455 SLC10A6Q3KNW5 377 aa8.12□□□□□ -1.11
RNU4-39P-201ENST00000362455 C2orf27AQ580R0 203 aa8.12□□□□□ -1.11
RNU4-39P-201ENST00000362455 DNAJB8Q8NHS0 232 aa8.12□□□□□ -1.11
RNU4-39P-201ENST00000362455 EZH1Q92800 747 aaPredicted RBP8.12□□□□□ -1.11
RNU4-39P-201ENST00000362455 ZNF512BQ96KM6 892 aaPredicted RBP8.12□□□□□ -1.11
RNU4-39P-201ENST00000362455 MIPEPQ99797 713 aa8.12□□□□□ -1.11
RNU4-39P-201ENST00000362455 FANCLQ9NW38 375 aa8.12□□□□□ -1.11
RNU4-39P-201ENST00000362455 ESYT3A0FGR9 886 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 KRBA1A5PL33 1030 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 DYNC1LI2O43237 492 aaPredicted RBP8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 BMP3P12645 472 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 KCNMA1Q12791 1236 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 SQSTM1Q13501 440 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 UVSSAQ2YD98 709 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 LETMD1Q6P1Q0 360 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 DZIP1LQ8IYY4 767 aaKnown RBP8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 THAP3Q8WTV1 239 aaPredicted RBP8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 UTP4Q969X6 686 aaKnown RBP8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 MEGF10Q96KG7 1140 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 MYRFLQ96LU7 910 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 EPN3Q9H201 632 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 CEP131Q9UPN4 1083 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 LEMD3Q9Y2U8 911 aa8.11□□□□□ -1.11
RNU4-39P-201ENST00000362455 CDC45O75419 566 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 CLSTN1O94985 981 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 SLITRK5O94991 958 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 MAP4P27816 1152 aaKnown RBP8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 RXRBP28702 533 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 MAP7Q14244 749 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 AXDND1Q5T1B0 1012 aaPredicted RBP8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 CCDC144CPQ8IYA2 1237 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 ARMC10Q8N2F6 343 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 JMYQ8N9B5 988 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 RIN3Q8TB24 985 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 SMARCC1Q92922 1105 aaPredicted RBP8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 PSMG3-AS1Q96PY0 264 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 HAUS7Q99871 368 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 TMEM260Q9NX78 707 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 SUSD2Q9UGT4 822 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 BIVM-ERCC5R4GMW8 1640 aa8.1□□□□□ -1.11
RNU4-39P-201ENST00000362455 MAPKBP1O60336 1514 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 COL17A1Q9UMD9 1497 aaPredicted RBP8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 ANKRD34BA5PLL1 514 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 EPHX1P07099 455 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 ZNF143P52747 638 aaPredicted RBP8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 CDK5R2Q13319 367 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 PLEKHG4Q58EX7 1191 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 DCAF15Q66K64 600 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 SEZ6L2Q6UXD5 910 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 CDH24Q86UP0 819 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 TXNRD3Q86VQ6 643 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 HOMER1Q86YM7 354 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 APPBP2Q92624 585 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 DCAF5Q96JK2 942 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 KREMEN1Q96MU8 473 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 SPATA9Q9BWV2 254 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms