RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 CUL4AQ13619 759 aa24.14■■□□□ 1.46
SHISA4-201ENST00000362011 RCSD1Q6JBY9 416 aa24.14■■□□□ 1.46
SHISA4-201ENST00000362011 MOB2Q70IA6 237 aa24.14■■□□□ 1.46
SHISA4-201ENST00000362011 CEP95Q96GE4 821 aa24.14■■□□□ 1.46
SHISA4-201ENST00000362011 SLC12A7Q9Y666 1083 aa24.14■■□□□ 1.46
SHISA4-201ENST00000362011 PFKFB2O60825 505 aa24.13■■□□□ 1.45
SHISA4-201ENST00000362011 RRP1BQ14684 758 aaKnown RBP24.13■■□□□ 1.45
SHISA4-201ENST00000362011 NOM1Q5C9Z4 860 aaKnown RBP24.13■■□□□ 1.45
SHISA4-201ENST00000362011 ZNF654Q8IZM8 581 aa24.13■■□□□ 1.45
SHISA4-201ENST00000362011 KAT14Q9H8E8 782 aa24.13■■□□□ 1.45
SHISA4-201ENST00000362011 MTMR4Q9NYA4 1195 aa24.13■■□□□ 1.45
SHISA4-201ENST00000362011 STX8Q9UNK0 236 aa24.13■■□□□ 1.45
SHISA4-201ENST00000362011 ZBTB43O43298 467 aa24.12■■□□□ 1.45
SHISA4-201ENST00000362011 GH2P01242 217 aa24.12■■□□□ 1.45
SHISA4-201ENST00000362011 CAP2P40123 477 aa24.12■■□□□ 1.45
SHISA4-201ENST00000362011 TM4SF4P48230 202 aa24.12■■□□□ 1.45
SHISA4-201ENST00000362011 NOVP48745 357 aa24.12■■□□□ 1.45
SHISA4-201ENST00000362011 CATIPQ7Z7H3 387 aa24.12■■□□□ 1.45
SHISA4-201ENST00000362011 CCDC83Q8IWF9 413 aa24.12■■□□□ 1.45
SHISA4-201ENST00000362011 PHF20L1A8MW92 1017 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 UBE2Q2LH0YL09 131 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 RCAN1P53805 252 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 SOX10P56693 466 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 SEPT2Q15019 361 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 NECAB1Q8N987 351 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 GTF3C6Q969F1 213 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 CHMP4CQ96CF2 233 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 KANSL2Q9H9L4 492 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 ZBTB21Q9ULJ3 1066 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 NID2Q14112 1375 aa24.11■■□□□ 1.45
SHISA4-201ENST00000362011 DDAH1O94760 285 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 TTLL1O95922 423 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 CALM1P0DP23 149 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 CALM2P0DP24 149 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 CALM3P0DP25 149 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 TOP1P11387 765 aaKnown RBP24.1■■□□□ 1.45
SHISA4-201ENST00000362011 GUCY1A2P33402 732 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 NF2P35240 595 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 SHROOM1Q2M3G4 852 aaPredicted RBP24.1■■□□□ 1.45
SHISA4-201ENST00000362011 MICU3Q86XE3 530 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 TMEM47Q9BQJ4 181 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 GINM1Q9NU53 330 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 HPS5Q9UPZ3 1129 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 GOLGA8AA7E2F4 631 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 METAP2P50579 478 aaKnown RBP eCLIP24.1■■□□□ 1.45
SHISA4-201ENST00000362011 CCT2P78371 535 aaKnown RBP24.1■■□□□ 1.45
SHISA4-201ENST00000362011 JAG1P78504 1218 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 ST3GAL1Q11201 340 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 SCRN1Q12765 414 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 PKN2Q16513 984 aaKnown RBP24.1■■□□□ 1.45
SHISA4-201ENST00000362011 RAB11FIP4Q86YS3 637 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 CLEC10AQ8IUN9 316 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 SPRYD3Q8NCJ5 442 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 PNMA1Q8ND90 353 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 INTS4Q96HW7 963 aaKnown RBP24.1■■□□□ 1.45
SHISA4-201ENST00000362011 MYL10Q9BUA6 226 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 CFHR5Q9BXR6 569 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 NYAP2Q9P242 653 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 ZNF112Q9UJU3 913 aa24.1■■□□□ 1.45
SHISA4-201ENST00000362011 CTNND1O60716 968 aaKnown RBP24.09■■□□□ 1.45
SHISA4-201ENST00000362011 ASNSP08243 561 aa24.09■■□□□ 1.45
SHISA4-201ENST00000362011 ICA1Q05084 483 aa24.09■■□□□ 1.45
SHISA4-201ENST00000362011 RAB3GAP1Q15042 981 aa24.09■■□□□ 1.45
SHISA4-201ENST00000362011 NUP133Q8WUM0 1156 aa24.09■■□□□ 1.45
SHISA4-201ENST00000362011 ZNF296Q8WUU4 475 aaPredicted RBP24.09■■□□□ 1.45
SHISA4-201ENST00000362011 PCDH10Q9P2E7 1040 aa24.09■■□□□ 1.45
SHISA4-201ENST00000362011 CLIP2Q9UDT6 1046 aa24.09■■□□□ 1.45
SHISA4-201ENST00000362011 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.09■■□□□ 1.45
SHISA4-201ENST00000362011 PTPRFP10586 1907 aa24.09■■□□□ 1.45
SHISA4-201ENST00000362011 RXRAP19793 462 aa24.08■■□□□ 1.44
SHISA4-201ENST00000362011 ATP2B2Q01814 1243 aa24.08■■□□□ 1.44
SHISA4-201ENST00000362011 WRNIP1Q96S55 665 aa24.08■■□□□ 1.44
SHISA4-201ENST00000362011 FOXD4L1Q9NU39 408 aa24.08■■□□□ 1.44
SHISA4-201ENST00000362011 PDE4DIPQ5VU43 2346 aa24.07■■□□□ 1.44
SHISA4-201ENST00000362011 PPP1R12BO60237 982 aaPredicted RBP24.07■■□□□ 1.44
SHISA4-201ENST00000362011 EEF2P13639 858 aaKnown RBP24.07■■□□□ 1.44
SHISA4-201ENST00000362011 RTN1Q16799 776 aa24.07■■□□□ 1.44
SHISA4-201ENST00000362011 NCOA5Q9HCD5 579 aaKnown RBP24.07■■□□□ 1.44
SHISA4-201ENST00000362011 DHX16O60231 1041 aaKnown RBP24.06■■□□□ 1.44
SHISA4-201ENST00000362011 USP2O75604 605 aaPredicted RBP24.06■■□□□ 1.44
SHISA4-201ENST00000362011 TBC1D8O95759 1140 aa24.06■■□□□ 1.44
SHISA4-201ENST00000362011 INPP5BP32019 993 aa24.06■■□□□ 1.44
SHISA4-201ENST00000362011 TROAPQ12815 778 aa24.06■■□□□ 1.44
SHISA4-201ENST00000362011 PPP2R5BQ15173 497 aa24.06■■□□□ 1.44
SHISA4-201ENST00000362011 LDLRAD1Q5T700 205 aa24.06■■□□□ 1.44
SHISA4-201ENST00000362011 CCDC144CPQ8IYA2 1237 aa24.06■■□□□ 1.44
SHISA4-201ENST00000362011 ARHGEF10LQ9HCE6 1279 aa24.06■■□□□ 1.44
SHISA4-201ENST00000362011 PRKG1Q13976 671 aa24.05■■□□□ 1.44
SHISA4-201ENST00000362011 SCYL3Q8IZE3 742 aa24.05■■□□□ 1.44
SHISA4-201ENST00000362011 LRRC47Q8N1G4 583 aaKnown RBP24.05■■□□□ 1.44
SHISA4-201ENST00000362011 FANCBQ8NB91 859 aa24.05■■□□□ 1.44
SHISA4-201ENST00000362011 CTCFLQ8NI51 663 aaPredicted RBP24.05■■□□□ 1.44
SHISA4-201ENST00000362011 MKL1Q969V6 931 aa24.05■■□□□ 1.44
SHISA4-201ENST00000362011 MAP3K14Q99558 947 aa24.05■■□□□ 1.44
SHISA4-201ENST00000362011 LLPHQ9BRT6 129 aaKnown RBP24.05■■□□□ 1.44
SHISA4-201ENST00000362011 RBM28Q9NW13 759 aaKnown RBP24.05■■□□□ 1.44
SHISA4-201ENST00000362011 FZD1Q9UP38 647 aa24.05■■□□□ 1.44
SHISA4-201ENST00000362011 CCDC196A0A1B0GTZ2 297 aa24.04■■□□□ 1.44
SHISA4-201ENST00000362011 GPR25O00155 361 aa24.04■■□□□ 1.44
SHISA4-201ENST00000362011 CPLX1O14810 134 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms