RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 NCBP1Q09161 790 aaKnown RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 TDRD12Q587J7 1177 aaKnown RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 FERMT2Q96AC1 680 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 MYOZ2Q9NPC6 264 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 PNMA2Q9UL42 364 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 PAXBP1Q9Y5B6 917 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 CCL15-CCL14A0A0B4J2E2 113 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 A0A0D9SFI3 127 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 PFKFB2O60825 505 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 CYLC1P35663 651 aaPredicted RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 CCL15Q16663 113 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 DIS3L2Q8IYB7 885 aaKnown RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 CHURC1Q8WUH1 139 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 DHX58Q96C10 678 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 POLRMTO00411 1230 aaKnown RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 TNNT1P13805 278 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 ADORA1P30542 326 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 NKX1-1Q15270 411 aaPredicted RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 TCERG1LQ5VWI1 586 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 CWC15Q9P013 229 aaKnown RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 PALD1Q9ULE6 856 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 V9GY48 417 aaPredicted RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 RPAP1Q9BWH6 1393 aaPredicted RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 RGPD8O14715 1765 aaPredicted RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 UQCRHLA0A096LP55 91 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 UQCRHP07919 91 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 RPS12P25398 132 aaKnown RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 PTPN12Q05209 780 aaKnown RBP7.92□□□□□ -1.14
RAB5B-201ENST00000360299 RASA3Q14644 834 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 MXD3Q9BW11 206 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 NMRK2Q9NPI5 230 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 TSKSQ9UJT2 592 aa7.92□□□□□ -1.14
RAB5B-201ENST00000360299 TFRCP02786 760 aaKnown RBP7.91□□□□□ -1.14
RAB5B-201ENST00000360299 TRIM28Q13263 835 aaKnown RBP7.91□□□□□ -1.14
RAB5B-201ENST00000360299 GALNT17Q6IS24 598 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.91□□□□□ -1.143e-7■■■□□ 19.2
RAB5B-201ENST00000360299 ZEB2O60315 1214 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 DKC1O60832 514 aaKnown RBP eCLIP7.91□□□□□ -1.14
RAB5B-201ENST00000360299 CFBP00751 764 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 KRT13P13646 458 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 FAM47AQ5JRC9 791 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 SDR42E1Q8WUS8 393 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 PRIMPOLQ96LW4 560 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 LSG1Q9H089 658 aaKnown RBP7.91□□□□□ -1.14
RAB5B-201ENST00000360299 DNAJC25Q9H1X3 360 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 NALCNQ8IZF0 1738 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 URI1O94763 535 aaPredicted RBP7.91□□□□□ -1.14
RAB5B-201ENST00000360299 SRGNP10124 158 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 MCM7P33993 719 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 PPM1FP49593 454 aaPredicted RBP7.91□□□□□ -1.14
RAB5B-201ENST00000360299 TUBB4BP68371 445 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 KRT40Q6A162 431 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 HS2ST1Q7LGA3 356 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 LRRC47Q8N1G4 583 aaKnown RBP7.91□□□□□ -1.14
RAB5B-201ENST00000360299 ZBED2Q9BTP6 218 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 RGPD1P0DJD0 1748 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 ZBBXA8MT70 800 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 USP17L12C9JPN9 530 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 USP17L21D6R901 530 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 IGSF3O75054 1194 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 FGAP02671 866 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 XRCC6P12956 609 aaKnown RBP eCLIP7.91□□□□□ -1.14
RAB5B-201ENST00000360299 TFAP4Q01664 338 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 PDE4DQ08499 809 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 SNAPC2Q13487 334 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 NONOQ15233 471 aaKnown RBP eCLIP7.91□□□□□ -1.14
RAB5B-201ENST00000360299 HAUS3Q68CZ6 603 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 AOPEPQ8N6M6 819 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 CPLX3Q8WVH0 158 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 CCDC102AQ96A19 550 aa7.91□□□□□ -1.14
RAB5B-201ENST00000360299 RXRAP19793 462 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 ZNF445P59923 1031 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 PTH1RQ03431 593 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 MFSD14CQ5VZR4 134 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 SIRT2Q8IXJ6 389 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 ZNF654Q8IZM8 581 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 LEO1Q8WVC0 666 aaPredicted RBP7.9□□□□□ -1.14
RAB5B-201ENST00000360299 NAA15Q9BXJ9 866 aaKnown RBP7.9□□□□□ -1.14
RAB5B-201ENST00000360299 CDHR2Q9BYE9 1310 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 KIF1AQ12756 1690 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 MED23Q9ULK4 1368 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 RPL13P26373 211 aaKnown RBP7.9□□□□□ -1.14
RAB5B-201ENST00000360299 MYL5Q02045 173 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 SNW1Q13573 536 aaKnown RBP7.9□□□□□ -1.14
RAB5B-201ENST00000360299 SV2BQ7L1I2 683 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.9□□□□□ -1.14
RAB5B-201ENST00000360299 CCDC65Q8IXS2 484 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 PDGFDQ9GZP0 370 aaPredicted RBP7.9□□□□□ -1.14
RAB5B-201ENST00000360299 CLSTN2Q9H4D0 955 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 MLXIPQ9HAP2 919 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 PI4KBQ9UBF8 816 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 KCNH3Q9ULD8 1083 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 PLEKHG2Q9H7P9 1386 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 Q3C1V9 767 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 TNS4Q8IZW8 715 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 GPC2Q8N158 579 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 MLKLQ8NB16 471 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 TBC1D5Q92609 795 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 BICD1Q96G01 975 aa7.9□□□□□ -1.14
RAB5B-201ENST00000360299 CCDC17Q96LX7 622 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms