RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TSPAN18Q96SJ8 248 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 PI4K2AQ9BTU6 479 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZNF277Q9NRM2 450 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 DDX20Q9UHI6 824 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 TK2O00142 265 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 PLD2O14939 933 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 CCNYL3P0C7X3 344 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 PDE6BP35913 854 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 CLK1P49759 484 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 PNLIPRP1P54315 467 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 FOXO1Q12778 655 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 OVCH2Q7RTZ1 564 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 KIF18BQ86Y91 864 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 CPA6Q8N4T0 437 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 FBXO27Q8NI29 283 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 GATAD2BQ8WXI9 593 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 SECISBP2LQ93073 1101 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 PGBD4Q96DM1 585 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 BRIP1Q9BX63 1249 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 FMN2Q9NZ56 1722 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 MED1Q15648 1581 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 RRBP1Q9P2E9 1410 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 KIF13BQ9NQT8 1826 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 SERTM1A2A2V5 107 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 SMAD7O15105 426 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 CBFA2T2O43439 604 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 GDF10P55107 478 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 MPP1Q00013 466 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 COL9A3Q14050 684 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 ICE2Q659A1 982 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 APPL2Q8NEU8 664 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 SGCZQ96LD1 299 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 NECAB3Q96P71 396 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 TRPV4Q9HBA0 871 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 TRMT1Q9NXH9 659 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 ADGRB1O14514 1584 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 PASKQ96RG2 1323 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 COBLO75128 1261 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 CFHP08603 1231 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 GTF2F1P35269 517 aaKnown RBP eCLIP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 EIF4A3P38919 411 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 NAA30Q147X3 362 aaPredicted RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZYXQ15942 572 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 WDR45BQ5MNZ6 344 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 COL23A1Q86Y22 540 aaPredicted RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 Q8N1Y9 231 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 TMEM160Q9NX00 188 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 SYCP2Q9BX26 1530 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 BRCA1P38398 1863 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 MASP2O00187 686 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 CD53P19397 219 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 PSMA3P25788 255 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 ADAM9Q13443 819 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 IQCEQ6IPM2 695 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 CHMP7Q8WUX9 453 aaPredicted RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 ATP1B4Q9UN42 357 aaPredicted RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 MTF2Q9Y483 593 aaPredicted RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 EHBP1L1Q8N3D4 1523 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 SMAPO00193 183 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 APAF1O14727 1248 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 GNRH1P01148 92 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 EPB42P16452 691 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 KCTD2Q14681 263 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 PUS10Q3MIT2 529 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 INTS6LQ5JSJ4 861 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 SYDE2Q5VT97 1194 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 CFAP161Q6P656 301 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 CPOQ8IVL8 374 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 LSM14AQ8ND56 463 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 SLC7A14Q8TBB6 771 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 DDX11Q96FC9 970 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 HOMER2Q9NSB8 354 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 PNMA3Q9UL41 463 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZNF214Q9UL59 606 aaPredicted RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 DGKBQ9Y6T7 804 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 CASKIN1Q8WXD9 1431 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 RAD50Q92878 1312 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 FAM208AQ9UK61 1670 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 PTK2Q05397 1052 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 PDE3BQ13370 1112 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 ATAT1Q5SQI0 421 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 LARP1Q6PKG0 1096 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 ADGRA1Q86SQ6 560 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 MFSD3Q96ES6 412 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 NTPCRQ9BSD7 190 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 CAAP1Q9H8G2 361 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 ATP6V0A4Q9HBG4 840 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 DOLKQ9UPQ8 538 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 TLR6Q9Y2C9 796 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 FANCIQ9NVI1 1328 aa2.51□□□□□ -2.01
SMARCAD1-202ENST00000359052 DVL2O14641 736 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 TBX1O43435 398 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 MLYCDO95822 493 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 LIN54Q6MZP7 749 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 NIF3L1Q9GZT8 377 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZNF552Q9H707 407 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZFATQ9P243 1243 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 SFMBT1Q9UHJ3 866 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms