RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 HIF1AQ16665 826 aa17.45■□□□□ 0.38
PCNX3-201ENST00000355703 SYT10Q6XYQ8 523 aa17.45■□□□□ 0.38
PCNX3-201ENST00000355703 PGBD3Q8N328 593 aa17.45■□□□□ 0.38
PCNX3-201ENST00000355703 FAM71BQ8TC56 605 aa17.45■□□□□ 0.38
PCNX3-201ENST00000355703 PRDM1O75626 825 aa17.45■□□□□ 0.38
PCNX3-201ENST00000355703 NSUN2Q08J23 767 aaKnown RBP eCLIP17.45■□□□□ 0.38
PCNX3-201ENST00000355703 ZC3H12BQ5HYM0 836 aaKnown RBP17.45■□□□□ 0.38
PCNX3-201ENST00000355703 ACTN4O43707 911 aaKnown RBP17.45■□□□□ 0.38
PCNX3-201ENST00000355703 SSH1Q8WYL5 1049 aa17.45■□□□□ 0.38
PCNX3-201ENST00000355703 ABHD8Q96I13 439 aa17.45■□□□□ 0.38
PCNX3-201ENST00000355703 TLR3O15455 904 aaKnown RBP17.44■□□□□ 0.38
PCNX3-201ENST00000355703 TAF5LO75529 589 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 NBPF11Q86T75 865 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 TGFBRAP1Q8WUH2 860 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 LRRC59Q96AG4 307 aaKnown RBP17.44■□□□□ 0.38
PCNX3-201ENST00000355703 DPYSL4O14531 572 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 MAPKAPK5Q8IW41 473 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 PDCD2Q16342 344 aaPredicted RBP17.44■□□□□ 0.38
PCNX3-201ENST00000355703 UHMK1Q8TAS1 419 aaKnown RBP17.44■□□□□ 0.38
PCNX3-201ENST00000355703 GTPBP10A4D1E9 387 aaKnown RBP17.44■□□□□ 0.38
PCNX3-201ENST00000355703 CCDC186Q7Z3E2 898 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 TTC25Q96NG3 672 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 RAD18Q9NS91 495 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 DNM3Q9UQ16 869 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 ATAD2Q6PL18 1390 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 GOLGA8CPA6NN73 597 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 NMIQ13287 307 aaPredicted RBP17.44■□□□□ 0.38
PCNX3-201ENST00000355703 OTUD6AQ7L8S5 288 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 MIER3Q7Z3K6 550 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 HOOK2Q96ED9 719 aa17.44■□□□□ 0.38
PCNX3-201ENST00000355703 SPTLC2O15270 562 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 DKC1O60832 514 aaKnown RBP eCLIP17.43■□□□□ 0.38
PCNX3-201ENST00000355703 NFATC2IPQ8NCF5 419 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 KCNA1Q09470 495 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 METTL23Q86XA0 190 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 BTG4Q9NY30 223 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 G3BP2Q9UN86 482 aaKnown RBP17.43■□□□□ 0.38
PCNX3-201ENST00000355703 ZSCAN20P17040 1043 aaPredicted RBP17.43■□□□□ 0.38
PCNX3-201ENST00000355703 SPAG1Q07617 926 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 EEPD1Q7L9B9 569 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 CCDC13Q8IYE1 715 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 FAM186BQ8IYM0 893 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 WDR7Q9Y4E6 1490 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 PCDHB13Q9Y5F0 798 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
PCNX3-201ENST00000355703 TBC1D8BQ0IIM8 1120 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 ANKRD20A3Q5VUR7 823 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 RNF219Q5W0B1 726 aaPredicted RBP17.43■□□□□ 0.38
PCNX3-201ENST00000355703 POLR3EQ9NVU0 708 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 LRRIQ4A6NIV6 560 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 SCNN1DP51172 638 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 TEKT4Q8WW24 435 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 ARHGDIAP52565 204 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 UBE2HP62256 183 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 HERC4Q5GLZ8 1057 aaPredicted RBP17.43■□□□□ 0.38
PCNX3-201ENST00000355703 HAUS3Q68CZ6 603 aa17.43■□□□□ 0.38
PCNX3-201ENST00000355703 PDCD6IPQ8WUM4 868 aaKnown RBP17.43■□□□□ 0.38
PCNX3-201ENST00000355703 B4E1Z4 1266 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 BAG6P46379 1132 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 DNM1Q05193 864 aaKnown RBP17.42■□□□□ 0.38
PCNX3-201ENST00000355703 TFCP2Q12800 502 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 RAB20Q9NX57 234 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 ORC6Q9Y5N6 252 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 HIBADHP31937 336 aaKnown RBP17.42■□□□□ 0.38
PCNX3-201ENST00000355703 CCDC85BQ15834 202 aaPredicted RBP17.42■□□□□ 0.38
PCNX3-201ENST00000355703 DCAF4L1Q3SXM0 396 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 TRMT10CQ7L0Y3 403 aaKnown RBP17.42■□□□□ 0.38
PCNX3-201ENST00000355703 DENND2CQ68D51 928 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 C8orf74Q6P047 294 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 SNX29Q8TEQ0 813 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 ATP6V0A1Q93050 837 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 PPFIA4O75335 1185 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 BRD2P25440 801 aaKnown RBP17.42■□□□□ 0.38
PCNX3-201ENST00000355703 RAB44Q7Z6P3 723 aaPredicted RBP17.42■□□□□ 0.38
PCNX3-201ENST00000355703 ZBTB8OSQ8IWT0 167 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 A6NJR5 290 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 PTK2BQ14289 1009 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 SAMSN1Q9NSI8 373 aaKnown RBP17.42■□□□□ 0.38
PCNX3-201ENST00000355703 HMG20BQ9P0W2 317 aa17.42■□□□□ 0.38
PCNX3-201ENST00000355703 TPX2Q9ULW0 747 aaKnown RBP17.42■□□□□ 0.38
PCNX3-201ENST00000355703 H7C0C1 242 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 ATP5OP48047 213 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 TRIM14Q14142 442 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 CCNYQ8ND76 341 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 DACT1Q9NYF0 836 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 PAXBP1Q9Y5B6 917 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 PIK3CAP42336 1068 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 ATP1A2P50993 1020 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 PLEKHH1Q9ULM0 1364 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 H3BRJ5 948 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 N4BP1O75113 896 aaKnown RBP17.41■□□□□ 0.38
PCNX3-201ENST00000355703 CALCRLQ16602 461 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 RSBN1LQ6PCB5 846 aaPredicted RBP17.41■□□□□ 0.38
PCNX3-201ENST00000355703 TRIM59Q8IWR1 403 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 AS3MTQ9HBK9 375 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 FMNL1O95466 1100 aaPredicted RBP17.41■□□□□ 0.38
PCNX3-201ENST00000355703 CC2D2BQ6DHV5 1058 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 C7orf31Q8N865 590 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 SNX19Q92543 992 aa17.41■□□□□ 0.38
PCNX3-201ENST00000355703 HSP90AA5PQ58FG0 334 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms