RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ECE1P42892 770 aa20.93■□□□□ 0.94
SDCBP2-201ENST00000339987 PPIL2Q13356 520 aa20.93■□□□□ 0.94
SDCBP2-201ENST00000339987 CATIPQ7Z7H3 387 aa20.93■□□□□ 0.94
SDCBP2-201ENST00000339987 SAPCD2Q86UD0 394 aa20.93■□□□□ 0.94
SDCBP2-201ENST00000339987 LRRC47Q8N1G4 583 aaKnown RBP20.93■□□□□ 0.94
SDCBP2-201ENST00000339987 GMCL1P1Q8NEA9 526 aa20.93■□□□□ 0.94
SDCBP2-201ENST00000339987 ZNF274Q96GC6 653 aaPredicted RBP20.93■□□□□ 0.94
SDCBP2-201ENST00000339987 USP17L10C9JJH3 530 aa20.92■□□□□ 0.94
SDCBP2-201ENST00000339987 SPP2Q13103 211 aa20.92■□□□□ 0.94
SDCBP2-201ENST00000339987 SYNE3Q6ZMZ3 975 aa20.92■□□□□ 0.94
SDCBP2-201ENST00000339987 OPTNQ96CV9 577 aa20.92■□□□□ 0.94
SDCBP2-201ENST00000339987 ZSCAN31Q96LW9 406 aaPredicted RBP20.92■□□□□ 0.94
SDCBP2-201ENST00000339987 FEZ1Q99689 392 aa20.92■□□□□ 0.94
SDCBP2-201ENST00000339987 TPCN1Q9ULQ1 816 aa20.92■□□□□ 0.94
SDCBP2-201ENST00000339987 NID2Q14112 1375 aa20.92■□□□□ 0.94
SDCBP2-201ENST00000339987 CALM1P0DP23 149 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 CALM2P0DP24 149 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 CALM3P0DP25 149 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 BACE1P56817 501 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 TROAPQ12815 778 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 CNKSR2Q8WXI2 1034 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 OTUD5Q96G74 571 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 HHIPL1Q96JK4 782 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 MAP3K14Q99558 947 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 VCPKMTQ9H867 229 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 GOPCQ9HD26 462 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 KCNH4Q9UQ05 1017 aa20.91■□□□□ 0.94
SDCBP2-201ENST00000339987 GOLGA8BA8MQT2 603 aa20.9■□□□□ 0.94
SDCBP2-201ENST00000339987 C19orf81C9J6K1 198 aa20.9■□□□□ 0.94
SDCBP2-201ENST00000339987 CXCL11O14625 94 aa20.9■□□□□ 0.94
SDCBP2-201ENST00000339987 ZBTB43O43298 467 aa20.9■□□□□ 0.94
SDCBP2-201ENST00000339987 PDIA3P30101 505 aaKnown RBP20.9■□□□□ 0.94
SDCBP2-201ENST00000339987 USP14P54578 494 aa20.9■□□□□ 0.94
SDCBP2-201ENST00000339987 NOL8Q76FK4 1167 aaKnown RBP20.9■□□□□ 0.94
SDCBP2-201ENST00000339987 WNK4Q96J92 1243 aa20.9■□□□□ 0.94
SDCBP2-201ENST00000339987 LARP6Q9BRS8 491 aaKnown RBP20.9■□□□□ 0.94
SDCBP2-201ENST00000339987 TRIM75PA6NK02 468 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 F5H6K3 240 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 SNHG28P0DPA3 235 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 APLP1P51693 650 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 KLRC3Q07444 240 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 MTMR2Q13614 643 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 SH3D19Q5HYK7 790 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 SLFN13Q68D06 897 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 USP17L2Q6R6M4 530 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 DCAF4Q8WV16 495 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 C12orf42Q96LP6 360 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 SH2B1Q9NRF2 756 aaPredicted RBP20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 HPS5Q9UPZ3 1129 aa20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 RBM19Q9Y4C8 960 aaKnown RBP20.89■□□□□ 0.94
SDCBP2-201ENST00000339987 IRF6O14896 467 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 NDUFB10O96000 172 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 GJA5P36382 358 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 GRM4Q14833 912 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 ME3Q16798 604 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 RGMBQ6NW40 437 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 MICU3Q86XE3 530 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 LPAR1Q92633 364 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 GMCL1Q96IK5 515 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 MYL10Q9BUA6 226 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 ABT1Q9ULW3 272 aaKnown RBP20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 NAP1L2Q9ULW6 460 aaPredicted RBP20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 PTPRFP10586 1907 aa20.88■□□□□ 0.93
SDCBP2-201ENST00000339987 PFKFB2O60825 505 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 ZBTB48P10074 688 aaPredicted RBP20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 PDHBP11177 359 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 PPP2R5BQ15173 497 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 SPRYD7Q5W111 196 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 HSCBQ8IWL3 235 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 NUP133Q8WUM0 1156 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 CREBZFQ9NS37 354 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 EMILIN3Q9NT22 766 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 A0A0G2JLL6 359 aaPredicted RBP20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 GOLGA8AA7E2F4 631 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 LARGE1O95461 756 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 METAP2P50579 478 aaKnown RBP eCLIP20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 ZNF157P51786 506 aaPredicted RBP20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 ZYXQ15942 572 aaKnown RBP20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 ASPRV1Q53RT3 343 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 KIAA1755Q5JYT7 1200 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 PRRT2Q7Z6L0 340 aaPredicted RBP20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 RASAL3Q86YV0 1011 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 FANCBQ8NB91 859 aa20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 CTCFLQ8NI51 663 aaPredicted RBP20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 SLKQ9H2G2 1235 aaPredicted RBP20.87■□□□□ 0.93
SDCBP2-201ENST00000339987 K7ELQ4 463 aaPredicted RBP20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 RXRAP19793 462 aa20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 KIF5BP33176 963 aa20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 ANP32AP39687 249 aaKnown RBP20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 HMGCS2P54868 508 aa20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 SNAPC2Q13487 334 aa20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 RTN1Q16799 776 aa20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 GPATCH4Q5T3I0 446 aaKnown RBP20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 RAB11FIP4Q86YS3 637 aa20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 TMX3Q96JJ7 454 aa20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 RBM28Q9NW13 759 aaKnown RBP20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 TMOD4Q9NZQ9 345 aa20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 LOC285556D6RIA3 1793 aa20.86■□□□□ 0.93
SDCBP2-201ENST00000339987 PALM3A6NDB9 673 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms