RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 AGPSO00116 658 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 BIRC5O15392 142 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 NR1I2O75469 434 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 GUCY1B3Q02153 619 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 DMPKQ09013 629 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 ARFGAP2Q8N6H7 521 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 NSUN7Q8NE18 718 aaKnown RBP9.56□□□□□ -0.88
TDP1-201ENST00000335725 DYTNA2CJ06 578 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 TRIM43BA6NCK2 446 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 OPLAHO14841 1288 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 LMNB2Q03252 620 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 KLC1Q07866 573 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 ANKRD20A2Q5SQ80 823 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 ANKRD20A1Q5TYW2 823 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 ANKRD20A3Q5VUR7 823 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 CACNA2D3Q8IZS8 1091 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 WDR60Q8WVS4 1066 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 SSH1Q8WYL5 1049 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 ZSCAN31Q96LW9 406 aaPredicted RBP9.56□□□□□ -0.88
TDP1-201ENST00000335725 SLC39A3Q9BRY0 314 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 SIL1Q9H173 461 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 PIDD1Q9HB75 910 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 SUCLA2Q9P2R7 463 aaPredicted RBP9.56□□□□□ -0.88
TDP1-201ENST00000335725 PPME1Q9Y570 386 aa9.56□□□□□ -0.88
TDP1-201ENST00000335725 DISP3Q9P2K9 1392 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 DNM1LO00429 736 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 HSF2BPO75031 334 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 SUPT3HO75486 399 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 ATP2A2P16615 1042 aaKnown RBP9.55□□□□□ -0.88
TDP1-201ENST00000335725 PCK1P35558 622 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 CCT8P50990 548 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 USP14P54578 494 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 SULT2A1Q06520 285 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 FXNQ16595 210 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 PARP10Q53GL7 1025 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 POTEEQ6S8J3 1075 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 TCP11L2Q8N4U5 519 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 MIS12Q9H081 205 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 PNMA2Q9UL42 364 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 FGD5Q6ZNL6 1462 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 MTRF1O75570 445 aaKnown RBP9.55□□□□□ -0.88
TDP1-201ENST00000335725 GJB2P29033 226 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 TCF7P36402 384 aaPredicted RBP9.55□□□□□ -0.88
TDP1-201ENST00000335725 HDLBPQ00341 1268 aaKnown RBP9.55□□□□□ -0.88
TDP1-201ENST00000335725 EIF2B5Q13144 721 aaKnown RBP9.55□□□□□ -0.88
TDP1-201ENST00000335725 ADAM9Q13443 819 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 PNMA8AQ86V59 439 aaPredicted RBP9.55□□□□□ -0.88
TDP1-201ENST00000335725 KLHDC4Q8TBB5 520 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 SNX27Q96L92 541 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 SEL1LQ9UBV2 794 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 HDGFP51858 240 aaKnown RBP9.55□□□□□ -0.88
TDP1-201ENST00000335725 PMS2P54278 862 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 GRAMD4Q6IC98 578 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 AGAP11Q8TF27 550 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 SELENOOQ9BVL4 669 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 OSBPL7Q9BZF2 842 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
TDP1-201ENST00000335725 RMND1Q9NWS8 449 aa9.55□□□□□ -0.88
TDP1-201ENST00000335725 SPDYE5A6NIY4 337 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 WDR46O15213 610 aaKnown RBP9.54□□□□□ -0.88
TDP1-201ENST00000335725 AKR1B10O60218 316 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 ZNF268Q14587 947 aaPredicted RBP9.54□□□□□ -0.88
TDP1-201ENST00000335725 CNGA3Q16281 694 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 TBC1D10BQ4KMP7 808 aaPredicted RBP9.54□□□□□ -0.88
TDP1-201ENST00000335725 TMEM53Q6P2H8 277 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 WDR75Q8IWA0 830 aaKnown RBP9.54□□□□□ -0.88
TDP1-201ENST00000335725 ANKK1Q8NFD2 765 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 CYFIP2Q96F07 1278 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 CLMNQ96JQ2 1002 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 SH2B1Q9NRF2 756 aaPredicted RBP9.54□□□□□ -0.88
TDP1-201ENST00000335725 CTNNAL1Q9UBT7 734 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 SCOCQ9UIL1 159 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 TTLL3Q9Y4R7 772 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 HTR3EA5X5Y0 456 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 E7EVH7 732 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 MARCH6O60337 910 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 MGEA5O60502 916 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 ALADP13716 330 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 PDE1BQ01064 536 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 CEBPZQ03701 1054 aaKnown RBP9.54□□□□□ -0.88
TDP1-201ENST00000335725 CCDC153Q494R4 210 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 PPP4R3AQ6IN85 833 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 RUBCNQ92622 972 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 CEP131Q9UPN4 1083 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 TRIM37O94972 964 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 LDHAP00338 332 aaKnown RBP9.54□□□□□ -0.88
TDP1-201ENST00000335725 CD97P48960 835 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 ALDH1L2Q3SY69 923 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 CACNA2D4Q7Z3S7 1137 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 UBE2Q1Q7Z7E8 422 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 RASEFQ8IZ41 740 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 SLC43A3Q8NBI5 491 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 DEPTORQ8TB45 409 aa9.54□□□□□ -0.88
TDP1-201ENST00000335725 NAPGQ99747 312 aaPredicted RBP9.54□□□□□ -0.88
TDP1-201ENST00000335725 PUS3Q9BZE2 481 aaKnown RBP9.54□□□□□ -0.88
TDP1-201ENST00000335725 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.53□□□□□ -0.88
TDP1-201ENST00000335725 ZBTB7BO15156 539 aaPredicted RBP9.53□□□□□ -0.88
TDP1-201ENST00000335725 S100A1P23297 94 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 HOXD10P28358 340 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 206.5 ms