RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TRPM1Q7Z4N2 1603 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 CHMP2AO43633 222 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 MCTP2Q6DN12 878 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 STX10O60499 249 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 B4GALNT4Q76KP1 1039 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 CMTR1Q8N1G2 835 aaKnown RBP19■□□□□ 0.63
TRAPPC11-201ENST00000334690 SAMD15Q9P1V8 674 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 EXOC7Q9UPT5 735 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 PPP2R2CQ9Y2T4 447 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 CDC25BP30305 580 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 PAK2Q13177 524 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 BIRC3Q13489 604 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 SFMBT2Q5VUG0 894 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 GSDMAQ96QA5 445 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 KDM3AQ9Y4C1 1321 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 GOLGA6CA6NDK9 693 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 IKBKBO14920 756 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 GOLGA6DP0CG33 693 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 NCBP1Q09161 790 aaKnown RBP18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 MORC3Q14149 939 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 MSL1Q68DK7 614 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 RUFY4Q6ZNE9 571 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 CROCCP2Q86T23 111 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 HAUS4Q9H6D7 363 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 FAM207AQ9NSI2 230 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 GOLGA6AQ9NYA3 693 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 MAP3K4Q9Y6R4 1608 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 SASH1O94885 1247 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 ERCC5P28715 1186 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 CHRNDQ07001 517 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 ZNF827Q17R98 1081 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 UBL4BQ8N7F7 174 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 KIAA1524Q8TCG1 905 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 CLIC6Q96NY7 704 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 ATP2A2P16615 1042 aaKnown RBP18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 TRAPPC10P48553 1259 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 MFSD14BQ5SR56 506 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 HECW2Q9P2P5 1572 aa18.99■□□□□ 0.63
TRAPPC11-201ENST00000334690 GOLGA6BA6NDN3 693 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 SMIM23A6NLE4 172 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 TRIM58Q8NG06 486 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 ABCC3O15438 1527 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 NDUFAB1O14561 156 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 ZBTB16Q05516 673 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 PPFIA1Q13136 1202 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 CEP128Q6ZU80 1094 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 RRAGAQ7L523 313 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 CCDC114Q96M63 670 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 EFCAB8A8MWE9 144 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 KLRF2D3W0D1 207 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 LONP1P36776 959 aaKnown RBP18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 RPS6KA1Q15418 735 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 ERCC6LQ2NKX8 1250 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 LONRF3Q496Y0 759 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 OR52Z1P0C646 297 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 PTGDRQ13258 359 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 CLUL1Q15846 466 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 FAM98CQ17RN3 349 aaKnown RBP18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 NEK8Q86SG6 692 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 C2CD5Q86YS7 1000 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 SYCE1Q8N0S2 351 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 CCDC24Q8N4L8 307 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 LINC00301Q8NCQ3 95 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 ZBTB9Q96C00 473 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 FAM212AQ96EL1 285 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
TRAPPC11-201ENST00000334690 SEMA3EO15041 775 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 CEP104O60308 925 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 ATP5DP30049 168 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 NELFCDQ8IXH7 590 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 UTP11Q9Y3A2 253 aaKnown RBP18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 CCDC169A6NNP5 214 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 EXOC3O60645 756 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 PODXL2Q9NZ53 605 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 PKD2L1Q9P0L9 805 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 INF2Q27J81 1249 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 MYOCDQ8IZQ8 938 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 IPO4Q8TEX9 1081 aaKnown RBP18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 BCORL1Q5H9F3 1711 aa18.97■□□□□ 0.63
TRAPPC11-201ENST00000334690 ADD2P35612 726 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 SP4Q02446 784 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 IFT74Q96LB3 600 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 PRAMEF22A3QJZ6 481 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 TMEM87AQ8NBN3 555 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 DESI2Q9BSY9 194 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 NKIRAS1Q9NYS0 192 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 PYCARDQ9ULZ3 195 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 KIF23Q02241 960 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 CCDC6Q16204 474 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 TYW1BQ6NUM6 668 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 MAGEF1Q9HAY2 307 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 NLRC4Q9NPP4 1024 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 BCRP11274 1271 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 KRT5P13647 590 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 RNASE9P60153 205 aaKnown RBP18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 MYCT1Q8N699 235 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 RASSF4Q9H2L5 321 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 KCNK9Q9NPC2 374 aa18.96■□□□□ 0.63
TRAPPC11-201ENST00000334690 IFNAR1P17181 557 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms