RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 CCDC114Q96M63 670 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 IL6STP40189 918 aaPredicted RBP18.22■□□□□ 0.51
BRD3-201ENST00000303407 PLCB3Q01970 1234 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 MRFAP1L1Q96HT8 127 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 A0A1W2PQ27 194 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 A0A1W2PQ64 194 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 A0A1W2PQD8 194 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 ZEB2O60315 1214 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 TECP42680 631 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 CCDC25Q86WR0 208 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 MYCT1Q8N699 235 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 GCNT3O95395 438 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 GOLGA8HP0CJ92 632 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 BTDP43251 543 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 WDR44Q5JSH3 913 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 UTP14CQ5TAP6 766 aaKnown RBP18.21■□□□□ 0.51
BRD3-201ENST00000303407 USPL1Q5W0Q7 1092 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 SYMPKQ92797 1274 aaKnown RBP18.21■□□□□ 0.51
BRD3-201ENST00000303407 GJA3Q9Y6H8 435 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 FNBP1Q96RU3 617 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 NCAPD2Q15021 1401 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 ATP2A1O14983 1001 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 MYCLP12524 364 aaPredicted RBP18.21■□□□□ 0.51
BRD3-201ENST00000303407 PPP1R14CQ8TAE6 165 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 PUS7LQ9H0K6 701 aaKnown RBP18.21■□□□□ 0.51
BRD3-201ENST00000303407 MRPL44Q9H9J2 332 aaKnown RBP18.21■□□□□ 0.51
BRD3-201ENST00000303407 ALDH1B1P30837 517 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 TRIML1Q8N9V2 468 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 CCDC51Q96ER9 411 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 FANCLQ9NW38 375 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 STK32BQ9NY57 414 aa18.21■□□□□ 0.51
BRD3-201ENST00000303407 BIRC3Q13489 604 aa18.21■□□□□ 0.5
BRD3-201ENST00000303407 PICK1Q9NRD5 415 aa18.21■□□□□ 0.5
BRD3-201ENST00000303407 CEP83Q9Y592 693 aa18.21■□□□□ 0.5
BRD3-201ENST00000303407 ATP2B4P23634 1241 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 APOA5Q6Q788 366 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 PPP6R2O75170 966 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 NF2P35240 595 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 SFMBT2Q5VUG0 894 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 UBE2Q2Q8WVN8 375 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 SEC31BQ9NQW1 1179 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 TYW1BQ6NUM6 668 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 PI16Q6UXB8 463 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 OSBP2Q969R2 916 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 IQCGQ9H095 443 aaKnown RBP18.2■□□□□ 0.5
BRD3-201ENST00000303407 EXOC7Q9UPT5 735 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 CFBP00751 764 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 NT5C3AQ9H0P0 336 aa18.2■□□□□ 0.5
BRD3-201ENST00000303407 FAM207AQ9NSI2 230 aaPredicted RBP18.2■□□□□ 0.5
BRD3-201ENST00000303407 ZNF804BA4D1E1 1349 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 KDM3AQ9Y4C1 1321 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 HARSP12081 509 aaKnown RBP18.19■□□□□ 0.5
BRD3-201ENST00000303407 CDC25BP30305 580 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 MAGEA1P43355 309 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 TSNARE1Q96NA8 513 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 ATP8A2Q9NTI2 1148 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 TLDC2A0PJX2 215 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 NECTIN1Q15223 517 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 SUPT20HQ8NEM7 779 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 NAP1L3Q99457 506 aaPredicted RBP18.19■□□□□ 0.5
BRD3-201ENST00000303407 SPOPO43791 374 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 PCP11498 1178 aaKnown RBP18.19■□□□□ 0.5
BRD3-201ENST00000303407 SLC39A14Q15043 492 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 LRRC47Q8N1G4 583 aaKnown RBP18.19■□□□□ 0.5
BRD3-201ENST00000303407 ANKS4BQ8N8V4 417 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 TEKT1Q969V4 418 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 MED14O60244 1454 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 KLRF2D3W0D1 207 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 AFAP1L1Q8TED9 768 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 CSRNP2Q9H175 543 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 POLR3EQ9NVU0 708 aa18.19■□□□□ 0.5
BRD3-201ENST00000303407 CALCOCO2Q13137 446 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 RRAGAQ7L523 313 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 NLRP10Q86W26 655 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 MSANTD4Q8NCY6 345 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 TDRD7Q8NHU6 1098 aaKnown RBP18.18■□□□□ 0.5
BRD3-201ENST00000303407 GTPBP6O43824 516 aaPredicted RBP18.18■□□□□ 0.5
BRD3-201ENST00000303407 OR52Z1P0C646 297 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 LARGE2Q8N3Y3 721 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 DESI2Q9BSY9 194 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 FTOQ9C0B1 505 aaKnown RBP eCLIP18.18■□□□□ 0.5
BRD3-201ENST00000303407 TMOD4Q9NZQ9 345 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 TULP4Q9NRJ4 1543 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 STAMBPO95630 424 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 RPN1P04843 607 aaKnown RBP18.18■□□□□ 0.5
BRD3-201ENST00000303407 KLHL30Q0D2K2 578 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 PYCARDQ9ULZ3 195 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 PPP2R2CQ9Y2T4 447 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 GALNT17Q6IS24 598 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 FOXP1Q9H334 677 aaPredicted RBP18.18■□□□□ 0.5
BRD3-201ENST00000303407 NCBP1Q09161 790 aaKnown RBP18.18■□□□□ 0.5
BRD3-201ENST00000303407 PTGDRQ13258 359 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 NEK8Q86SG6 692 aa18.18■□□□□ 0.5
BRD3-201ENST00000303407 EBAG9O00559 213 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 CCDC121Q6ZUS5 278 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 CCDC84Q86UT8 332 aaPredicted RBP18.17■□□□□ 0.5
BRD3-201ENST00000303407 IFT74Q96LB3 600 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 PSMB7Q99436 277 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 CAMSAP1Q5T5Y3 1602 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms