RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ATP1A2P50993 1020 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 DCAF17Q5H9S7 520 aaPredicted RBP14.92□□□□□ -0.02
CASC4-201ENST00000299957 RRAGAQ7L523 313 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 ZNF622Q969S3 477 aaKnown RBP eCLIP14.92□□□□□ -0.028e-8■□□□□ 10.6
CASC4-201ENST00000299957 PIK3C2BO00750 1634 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 PP2D1A8MPX8 630 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 STX10O60499 249 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 HIBADHP31937 336 aaKnown RBP14.92□□□□□ -0.02
CASC4-201ENST00000299957 RFX5P48382 616 aaPredicted RBP14.92□□□□□ -0.02
CASC4-201ENST00000299957 CDR1P51861 262 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 KRT83P78385 493 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 SPATA1Q5VX52 437 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 KCTD16Q68DU8 428 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 KLHL7Q8IXQ5 586 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 SUGCTQ9HAC7 445 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 FBXO3Q9UK99 471 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 MED23Q9ULK4 1368 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 LDHBP07195 334 aaKnown RBP14.92□□□□□ -0.02
CASC4-201ENST00000299957 CYP2D6P10635 497 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 CALML3P27482 149 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 PLCD1P51178 756 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 DYNLL2Q96FJ2 89 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 PPP1R1BQ9UD71 204 aaPredicted RBP14.92□□□□□ -0.02
CASC4-201ENST00000299957 INO80Q9ULG1 1556 aaPredicted RBP14.92□□□□□ -0.02
CASC4-201ENST00000299957 UBN2Q6ZU65 1347 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 ZC3H13Q5T200 1668 aaKnown RBP14.92□□□□□ -0.02
CASC4-201ENST00000299957 GUCY2FP51841 1108 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
CASC4-201ENST00000299957 LLGL1Q15334 1064 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 UBE3CQ15386 1083 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 TMTC1Q8IUR5 882 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 RAB34Q9BZG1 259 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 PKD2L1Q9P0L9 805 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 CALM1P0DP23 149 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 CALM2P0DP24 149 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 CALM3P0DP25 149 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 LRRC41Q15345 812 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 MAP3K15Q6ZN16 1313 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 IKBKBO14920 756 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 GNPATO15228 680 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 RFC4P35249 363 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 HDAC6Q9UBN7 1215 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 TTF2Q9UNY4 1162 aaKnown RBP14.91□□□□□ -0.02
CASC4-201ENST00000299957 EPN1Q9Y6I3 576 aaPredicted RBP14.91□□□□□ -0.02
CASC4-201ENST00000299957 TMEM110-MUSTN1A8MSY1 372 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 USPL1Q5W0Q7 1092 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 OR8K1Q8NGG5 319 aa14.91□□□□□ -0.02
CASC4-201ENST00000299957 TMEM94Q12767 1356 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 HEG1Q9ULI3 1381 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 ERVV-2B6SEH9 535 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 HSF2BPO75031 334 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 NBPF11Q86T75 865 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 RASSF4Q9H2L5 321 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 FRMPD2Q68DX3 1309 aaPredicted RBP14.9□□□□□ -0.02
CASC4-201ENST00000299957 IFNAR1P17181 557 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 ST5P78524 1137 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 ADAT2Q7Z6V5 191 aaKnown RBP14.9□□□□□ -0.02
CASC4-201ENST00000299957 ENGASEQ8NFI3 743 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 CTNNBL1Q8WYA6 563 aaPredicted RBP14.9□□□□□ -0.02
CASC4-201ENST00000299957 PPP6R2O75170 966 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 MAGEA1P43355 309 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 DIXDC1Q155Q3 683 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 KRT79Q5XKE5 535 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 MAEAQ7L5Y9 396 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 PNMA1Q8ND90 353 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 ABCB6Q9NP58 842 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 MYO6Q9UM54 1294 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 SAR1BQ9Y6B6 198 aa14.9□□□□□ -0.02
CASC4-201ENST00000299957 FMNL1O95466 1100 aaPredicted RBP14.89□□□□□ -0.03
CASC4-201ENST00000299957 TUBB4AP04350 444 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 USP17L8P0C7I0 530 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 COPB1P53618 953 aaKnown RBP14.89□□□□□ -0.03
CASC4-201ENST00000299957 CUL4BQ13620 913 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 ZNF287Q9HBT7 754 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 SLAIN2Q9P270 581 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 USP42Q9H9J4 1324 aaKnown RBP14.89□□□□□ -0.03
CASC4-201ENST00000299957 CDC42BPGQ6DT37 1551 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 SLC7A5Q01650 507 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 CKAP4Q07065 602 aaKnown RBP14.89□□□□□ -0.03
CASC4-201ENST00000299957 SUSD4Q5VX71 490 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 KANSL2Q9H9L4 492 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 C6orf50Q9HD87 102 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 SHPRHQ149N8 1683 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 TSGA10IPQ3SY00 556 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 FAM114A1Q8IWE2 563 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 TEX11Q8IYF3 940 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 ANKRD7Q92527 254 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 LY9Q9HBG7 655 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 CDC23Q9UJX2 597 aa14.89□□□□□ -0.03
CASC4-201ENST00000299957 DYDC1Q8WWB3 177 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 PAGE5Q96GU1 130 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 C8orf37Q96NL8 207 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 OSBPL5Q9H0X9 879 aaPredicted RBP14.88□□□□□ -0.03
CASC4-201ENST00000299957 LMTK2Q8IWU2 1503 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 USP17L3A6NCW0 530 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 USP17L4A6NCW7 530 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 RPN1P04843 607 aaKnown RBP14.88□□□□□ -0.03
CASC4-201ENST00000299957 USP17L1Q7RTZ2 530 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 SRGAP1Q7Z6B7 1085 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 CABP7Q86V35 215 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms