RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 CATSPERGQ6ZRH7 1159 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 SPICE1Q8N0Z3 855 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 DSCC1Q9BVC3 393 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 BACH2Q9BYV9 841 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 VCPKMTQ9H867 229 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 CAP1Q01518 475 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 FBXO46Q6PJ61 603 aaPredicted RBP14.31□□□□□ -0.12
HMGB2-201ENST00000296503 NEDD1Q8NHV4 660 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 NYAP2Q9P242 653 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 CTNNA3Q9UI47 895 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.31□□□□□ -0.12
HMGB2-201ENST00000296503 LOC285556D6RIA3 1793 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 ZMYM6O95789 1325 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 HOXD10P28358 340 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 KIAA1755Q5JYT7 1200 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 LPAR1Q92633 364 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 CEP95Q96GE4 821 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 PAGR1Q9BTK6 254 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 TANGO6Q9C0B7 1094 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 IL25Q9H293 177 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 MTMR4Q9NYA4 1195 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 PTPN22Q9Y2R2 807 aa14.3□□□□□ -0.12
HMGB2-201ENST00000296503 CCDC85CA6NKD9 419 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 GNRH1P01148 92 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 FCGRTP55899 365 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 FAM110CQ1W6H9 321 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
HMGB2-201ENST00000296503 TRIM47Q96LD4 638 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 HOXC10Q9NYD6 342 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 TACC3Q9Y6A5 838 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 RAD50Q92878 1312 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 IGKV6D-41A0A0C4DH26 115 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 ORC4O43929 436 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 TTLL1O95922 423 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 CTGFP29279 349 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 COG2Q14746 738 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 IMMTQ16891 758 aaKnown RBP14.29□□□□□ -0.12
HMGB2-201ENST00000296503 BMP2KLQ5H9B9 411 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 AKNAD1Q5T1N1 836 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 IFFO2Q5TF58 517 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 CCAR1Q8IX12 1150 aaKnown RBP14.29□□□□□ -0.12
HMGB2-201ENST00000296503 GPRC5AQ8NFJ5 357 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 GTF3C2Q8WUA4 911 aaPredicted RBP14.29□□□□□ -0.12
HMGB2-201ENST00000296503 RNF41Q9H4P4 317 aaPredicted RBP14.29□□□□□ -0.12
HMGB2-201ENST00000296503 RBPJLQ9UBG7 517 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 HPS5Q9UPZ3 1129 aa14.29□□□□□ -0.12
HMGB2-201ENST00000296503 F5H6K3 240 aa14.28□□□□□ -0.12
HMGB2-201ENST00000296503 SGSM2O43147 1006 aa14.28□□□□□ -0.12
HMGB2-201ENST00000296503 PEX10O60683 326 aa14.28□□□□□ -0.12
HMGB2-201ENST00000296503 FGRP09769 529 aa14.28□□□□□ -0.12
HMGB2-201ENST00000296503 KLRC3Q07444 240 aa14.28□□□□□ -0.12
HMGB2-201ENST00000296503 PPP4R3BQ5MIZ7 849 aa14.28□□□□□ -0.12
HMGB2-201ENST00000296503 MKL1Q969V6 931 aa14.28□□□□□ -0.12
HMGB2-201ENST00000296503 STX8Q9UNK0 236 aa14.28□□□□□ -0.12
HMGB2-201ENST00000296503 TNPO2O14787 897 aaKnown RBP14.27□□□□□ -0.12
HMGB2-201ENST00000296503 WDR46O15213 610 aaKnown RBP14.27□□□□□ -0.12
HMGB2-201ENST00000296503 FLOT1O75955 427 aa14.27□□□□□ -0.12
HMGB2-201ENST00000296503 KIAA1211Q6ZU35 1233 aa14.27□□□□□ -0.12
HMGB2-201ENST00000296503 MORF4L1Q9UBU8 362 aa14.27□□□□□ -0.12
HMGB2-201ENST00000296503 NMT2O60551 498 aa14.27□□□□□ -0.13
HMGB2-201ENST00000296503 PCP11498 1178 aaKnown RBP14.27□□□□□ -0.13
HMGB2-201ENST00000296503 PRMT2P55345 433 aa14.27□□□□□ -0.13
HMGB2-201ENST00000296503 PTH1RQ03431 593 aa14.27□□□□□ -0.13
HMGB2-201ENST00000296503 Q3C1V9 767 aa14.27□□□□□ -0.13
HMGB2-201ENST00000296503 TBC1D10CQ8IV04 446 aa14.27□□□□□ -0.13
HMGB2-201ENST00000296503 STAG1Q8WVM7 1258 aa14.27□□□□□ -0.13
HMGB2-201ENST00000296503 COA7Q96BR5 231 aa14.27□□□□□ -0.13
HMGB2-201ENST00000296503 TXNRD2Q9NNW7 524 aa14.27□□□□□ -0.13
HMGB2-201ENST00000296503 SRRDQ9UH36 339 aa14.27□□□□□ -0.13
HMGB2-201ENST00000296503 RABGAP1Q9Y3P9 1069 aa14.27□□□□□ -0.13
HMGB2-201ENST00000296503 ERVK-9P63128 1117 aa14.26□□□□□ -0.13
HMGB2-201ENST00000296503 ERVK-24P63145 666 aa14.26□□□□□ -0.13
HMGB2-201ENST00000296503 FAM83BQ5T0W9 1011 aa14.26□□□□□ -0.13
HMGB2-201ENST00000296503 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
HMGB2-201ENST00000296503 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
HMGB2-201ENST00000296503 CWC22Q9HCG8 908 aaKnown RBP14.26□□□□□ -0.13
HMGB2-201ENST00000296503 IL17RBQ9NRM6 502 aa14.26□□□□□ -0.13
HMGB2-201ENST00000296503 PTCH2Q9Y6C5 1203 aa14.26□□□□□ -0.13
HMGB2-201ENST00000296503 SPDYE16A6NNV3 312 aaPredicted RBP14.25□□□□□ -0.13
HMGB2-201ENST00000296503 DSG3P32926 999 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 CASC1Q6TDU7 716 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 RAET1EQ8TD07 263 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 UBE2Q2Q8WVN8 375 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 ESR2Q92731 530 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 CHMP4CQ96CF2 233 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 NUP88Q99567 741 aaPredicted RBP14.25□□□□□ -0.13
HMGB2-201ENST00000296503 ISY1Q9ULR0 285 aaKnown RBP14.25□□□□□ -0.13
HMGB2-201ENST00000296503 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
HMGB2-201ENST00000296503 MYPNQ86TC9 1320 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 PLIN4Q96Q06 1357 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 NDUFB10O96000 172 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 CCNA1P78396 465 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 SLFN13Q68D06 897 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 LBX2Q6XYB7 198 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 ESYT1Q9BSJ8 1104 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 GABRQQ9UN88 632 aa14.25□□□□□ -0.13
HMGB2-201ENST00000296503 GREB1LQ9C091 1923 aaPredicted RBP14.24□□□□□ -0.13
HMGB2-201ENST00000296503 PRKCZQ05513 592 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms