RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 TNKSO95271 1327 aa19.76■□□□□ 0.75
TRAM1-201ENST00000262213 KRT2P35908 639 aa19.76■□□□□ 0.75
TRAM1-201ENST00000262213 LRP2BPQ9P2M1 347 aa19.76■□□□□ 0.75
TRAM1-201ENST00000262213 GUCA1BQ9UMX6 200 aa19.76■□□□□ 0.75
TRAM1-201ENST00000262213 TFR2Q9UP52 801 aa19.76■□□□□ 0.75
TRAM1-201ENST00000262213 PLEKHA8P1O95397 391 aa19.76■□□□□ 0.75
TRAM1-201ENST00000262213 SLC5A1P13866 664 aa19.76■□□□□ 0.75
TRAM1-201ENST00000262213 TNS3Q68CZ2 1445 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 STARD3NLO95772 234 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 TTF2Q9UNY4 1162 aaKnown RBP19.75■□□□□ 0.75
TRAM1-201ENST00000262213 UBR2Q8IWV8 1755 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 CYP2D7A0A087X1C5 515 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 ENC1O14682 589 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 LEKR1Q6ZMV7 388 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 GOLGA5Q8TBA6 731 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 PIGBQ92521 554 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 ABHD10Q9NUJ1 306 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 CWC15Q9P013 229 aaKnown RBP19.75■□□□□ 0.75
TRAM1-201ENST00000262213 L1RE1Q9UN81 338 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 CDHR2Q9BYE9 1310 aa19.75■□□□□ 0.75
TRAM1-201ENST00000262213 EIF3JO75822 258 aaKnown RBP19.74■□□□□ 0.75
TRAM1-201ENST00000262213 XBP1P17861 261 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 PPARAQ07869 468 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 CASP8Q14790 479 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 FOXR1Q6PIV2 292 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 MSANTD4Q8NCY6 345 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 CHP1Q99653 195 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 ABCF2Q9UG63 623 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 POTEB2H3BUK9 544 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 PDE8AO60658 829 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 KRT9P35527 623 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 ACTN2P35609 894 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 RAB21Q9UL25 225 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 SPATA31A3Q5VYP0 1347 aa19.74■□□□□ 0.75
TRAM1-201ENST00000262213 MYO1CO00159 1063 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 PTGDRQ13258 359 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 PKN1Q16512 942 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 SKIDA1Q1XH10 827 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 SH3RF1Q7Z6J0 888 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 HNRNPLLQ8WVV9 542 aaKnown RBP19.73■□□□□ 0.75
TRAM1-201ENST00000262213 GSDMAQ96QA5 445 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 HDAC6Q9UBN7 1215 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 MYH6P13533 1939 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 ARHGAP25P42331 645 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 HSP90B2PQ58FF3 399 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 TMTC1Q8IUR5 882 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 GDAP1L1Q96MZ0 367 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 XDHP47989 1333 aa19.73■□□□□ 0.75
TRAM1-201ENST00000262213 COPB1P53618 953 aaKnown RBP19.72■□□□□ 0.75
TRAM1-201ENST00000262213 NKX1-1Q15270 411 aaPredicted RBP19.72■□□□□ 0.75
TRAM1-201ENST00000262213 TTC38Q5R3I4 469 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 TMTC2Q8N394 836 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 FGFR2P21802 821 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 CYP7A1P22680 504 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 USP5P45974 858 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 EVA1CP58658 441 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 CYP26C1Q6V0L0 522 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 PLEKHA4Q9H4M7 779 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 MYO6Q9UM54 1294 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 ZBTB1Q9Y2K1 713 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 LRP6O75581 1613 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 MCM7P33993 719 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 TNNT3P45378 269 aaPredicted RBP19.72■□□□□ 0.75
TRAM1-201ENST00000262213 UBXN1Q04323 297 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 ADGRA1Q86SQ6 560 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 NELFBQ8WX92 580 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 CAPZA3Q96KX2 299 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 RNF26Q9BY78 433 aaPredicted RBP19.72■□□□□ 0.75
TRAM1-201ENST00000262213 GDAQ9Y2T3 454 aa19.72■□□□□ 0.75
TRAM1-201ENST00000262213 LRRIQ3A6PVS8 624 aaPredicted RBP19.71■□□□□ 0.75
TRAM1-201ENST00000262213 KCNJ18B7U540 433 aa19.71■□□□□ 0.75
TRAM1-201ENST00000262213 KCNJ12Q14500 433 aa19.71■□□□□ 0.75
TRAM1-201ENST00000262213 PHF20Q9BVI0 1012 aa19.71■□□□□ 0.75
TRAM1-201ENST00000262213 RNF41Q9H4P4 317 aaPredicted RBP19.71■□□□□ 0.75
TRAM1-201ENST00000262213 PARP4Q9UKK3 1724 aaKnown RBP19.71■□□□□ 0.75
TRAM1-201ENST00000262213 SRGAP2O75044 1071 aa19.71■□□□□ 0.75
TRAM1-201ENST00000262213 ENAHQ8N8S7 591 aaPredicted RBP19.71■□□□□ 0.75
TRAM1-201ENST00000262213 HINFPQ9BQA5 517 aa19.71■□□□□ 0.75
TRAM1-201ENST00000262213 RASSF4Q9H2L5 321 aa19.71■□□□□ 0.75
TRAM1-201ENST00000262213 RRP15Q9Y3B9 282 aaKnown RBP19.71■□□□□ 0.75
TRAM1-201ENST00000262213 ANKRD65E5RJM6 399 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 ZMYND10O75800 440 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 PIP4K2BP78356 416 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 WHAMMP3Q1A5X7 153 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 PIK3AP1Q6ZUJ8 805 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 ESR2Q92731 530 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 CCDC51Q96ER9 411 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 EEF2KMTQ96G04 330 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 PSD3Q9NYI0 1048 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 TNS2Q63HR2 1409 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 A0A0G2JS52 829 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 TRIM49BA6NDI0 452 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 PAK1Q13153 545 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 IFIT1BQ5T764 474 aaKnown RBP19.7■□□□□ 0.74
TRAM1-201ENST00000262213 FERMT2Q96AC1 680 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 TSPYL1Q9H0U9 437 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 SOS2Q07890 1332 aaPredicted RBP19.7■□□□□ 0.74
TRAM1-201ENST00000262213 MROH5Q6ZUA9 1318 aa19.7■□□□□ 0.74
TRAM1-201ENST00000262213 GNAT2P19087 354 aa19.69■□□□□ 0.74
TRAM1-201ENST00000262213 ANKRD20A12PQ8NF67 263 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms