RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 SNX14Q9Y5W7 946 aa27.84■■■□□ 2.05
HOMER3-201ENST00000221222 CCDC178Q5BJE1 867 aa27.83■■■□□ 2.05
HOMER3-201ENST00000221222 USP17L2Q6R6M4 530 aa27.83■■■□□ 2.05
HOMER3-201ENST00000221222 CYB5R4Q7L1T6 521 aa27.83■■■□□ 2.05
HOMER3-201ENST00000221222 C12orf42Q96LP6 360 aa27.83■■■□□ 2.05
HOMER3-201ENST00000221222 PTPN18Q99952 460 aa27.83■■■□□ 2.05
HOMER3-201ENST00000221222 EMILIN3Q9NT22 766 aa27.83■■■□□ 2.05
HOMER3-201ENST00000221222 CLIP2Q9UDT6 1046 aa27.83■■■□□ 2.05
HOMER3-201ENST00000221222 ATP2B2Q01814 1243 aa27.82■■■□□ 2.04
HOMER3-201ENST00000221222 TTC14Q96N46 770 aa27.82■■■□□ 2.04
HOMER3-201ENST00000221222 RCSD1Q6JBY9 416 aa27.81■■■□□ 2.04
HOMER3-201ENST00000221222 IFNL1Q8IU54 200 aa27.81■■■□□ 2.04
HOMER3-201ENST00000221222 ZSCAN10Q96SZ4 725 aaPredicted RBP27.81■■■□□ 2.04
HOMER3-201ENST00000221222 ZCCHC17Q9NP64 241 aaKnown RBP27.81■■■□□ 2.04
HOMER3-201ENST00000221222 TMOD4Q9NZQ9 345 aa27.81■■■□□ 2.04
HOMER3-201ENST00000221222 STX8Q9UNK0 236 aa27.81■■■□□ 2.04
HOMER3-201ENST00000221222 IGF2BP3O00425 579 aaKnown RBP eCLIP27.8■■■□□ 2.04
HOMER3-201ENST00000221222 ZYXQ15942 572 aaKnown RBP27.8■■■□□ 2.04
HOMER3-201ENST00000221222 ADCK5Q3MIX3 580 aa27.8■■■□□ 2.04
HOMER3-201ENST00000221222 GPAT2Q6NUI2 795 aa27.8■■■□□ 2.04
HOMER3-201ENST00000221222 GADL1Q6ZQY3 521 aa27.8■■■□□ 2.04
HOMER3-201ENST00000221222 ANKRD23Q86SG2 305 aa27.8■■■□□ 2.04
HOMER3-201ENST00000221222 DGKHQ86XP1 1220 aa27.8■■■□□ 2.04
HOMER3-201ENST00000221222 NEK1Q96PY6 1258 aa27.8■■■□□ 2.04
HOMER3-201ENST00000221222 ZKSCAN3Q9BRR0 538 aa27.8■■■□□ 2.04
HOMER3-201ENST00000221222 UBAC1Q9BSL1 405 aa27.8■■■□□ 2.04
HOMER3-201ENST00000221222 MTA3Q9BTC8 594 aa27.8■■■□□ 2.04
HOMER3-201ENST00000221222 VCPKMTQ9H867 229 aa27.8■■■□□ 2.04
HOMER3-201ENST00000221222 BTBD19C9JJ37 291 aa27.79■■■□□ 2.04
HOMER3-201ENST00000221222 MCM5P33992 734 aa27.79■■■□□ 2.04
HOMER3-201ENST00000221222 ANTXR2P58335 489 aa27.79■■■□□ 2.04
HOMER3-201ENST00000221222 CTU1Q7Z7A3 348 aaKnown RBP27.79■■■□□ 2.04
HOMER3-201ENST00000221222 ANKS1AQ92625 1134 aa27.79■■■□□ 2.04
HOMER3-201ENST00000221222 LPAR1Q92633 364 aa27.79■■■□□ 2.04
HOMER3-201ENST00000221222 AGTPBP1Q9UPW5 1226 aa27.79■■■□□ 2.04
HOMER3-201ENST00000221222 TNKSO95271 1327 aa27.79■■■□□ 2.04
HOMER3-201ENST00000221222 COL9A3Q14050 684 aaPredicted RBP27.78■■■□□ 2.04
HOMER3-201ENST00000221222 OTUD7BQ6GQQ9 843 aa27.78■■■□□ 2.04
HOMER3-201ENST00000221222 FAM43AQ8N2R8 423 aa27.78■■■□□ 2.04
HOMER3-201ENST00000221222 ENAHQ8N8S7 591 aaPredicted RBP27.78■■■□□ 2.04
HOMER3-201ENST00000221222 ZNF296Q8WUU4 475 aaPredicted RBP27.78■■■□□ 2.04
HOMER3-201ENST00000221222 GOPCQ9HD26 462 aa27.78■■■□□ 2.04
HOMER3-201ENST00000221222 HMGB1P09429 215 aaKnown RBP27.77■■■□□ 2.04
HOMER3-201ENST00000221222 TOP1P11387 765 aaKnown RBP27.77■■■□□ 2.04
HOMER3-201ENST00000221222 KIAA1755Q5JYT7 1200 aa27.77■■■□□ 2.04
HOMER3-201ENST00000221222 GMCL1P1Q8NEA9 526 aa27.77■■■□□ 2.04
HOMER3-201ENST00000221222 SLC45A1Q9Y2W3 748 aa27.77■■■□□ 2.04
HOMER3-201ENST00000221222 ANAPC15P60006 121 aa27.76■■■□□ 2.03
HOMER3-201ENST00000221222 SEC23AQ15436 765 aa27.76■■■□□ 2.03
HOMER3-201ENST00000221222 TREML2Q5T2D2 321 aa27.76■■■□□ 2.03
HOMER3-201ENST00000221222 LRRC47Q8N1G4 583 aaKnown RBP27.76■■■□□ 2.03
HOMER3-201ENST00000221222 TMEM47Q9BQJ4 181 aa27.76■■■□□ 2.03
HOMER3-201ENST00000221222 R3HDMLQ9H3Y0 253 aa27.76■■■□□ 2.03
HOMER3-201ENST00000221222 WDR19Q8NEZ3 1342 aa27.76■■■□□ 2.03
HOMER3-201ENST00000221222 F5H6K3 240 aa27.75■■■□□ 2.03
HOMER3-201ENST00000221222 PRC1O43663 620 aa27.75■■■□□ 2.03
HOMER3-201ENST00000221222 ALDH1A1P00352 501 aa27.75■■■□□ 2.03
HOMER3-201ENST00000221222 VCAM1P19320 739 aa27.75■■■□□ 2.03
HOMER3-201ENST00000221222 MLLT1Q03111 559 aaPredicted RBP27.75■■■□□ 2.03
HOMER3-201ENST00000221222 KLRC3Q07444 240 aa27.75■■■□□ 2.03
HOMER3-201ENST00000221222 SART3Q15020 963 aaKnown RBP27.75■■■□□ 2.03
HOMER3-201ENST00000221222 CHST3Q7LGC8 479 aa27.75■■■□□ 2.03
HOMER3-201ENST00000221222 IL17RAQ96F46 866 aa27.75■■■□□ 2.03
HOMER3-201ENST00000221222 JAKMIP1Q96N16 626 aaKnown RBP27.75■■■□□ 2.03
HOMER3-201ENST00000221222 BACH2Q9BYV9 841 aa27.75■■■□□ 2.03
HOMER3-201ENST00000221222 PDHXO00330 501 aa27.74■■■□□ 2.03
HOMER3-201ENST00000221222 PSMA5P28066 241 aa27.74■■■□□ 2.03
HOMER3-201ENST00000221222 HOXA7P31268 230 aaPredicted RBP27.74■■■□□ 2.03
HOMER3-201ENST00000221222 DHX32Q7L7V1 743 aaKnown RBP27.74■■■□□ 2.03
HOMER3-201ENST00000221222 TMEM87BQ96K49 555 aa27.74■■■□□ 2.03
HOMER3-201ENST00000221222 GPR25O00155 361 aa27.73■■■□□ 2.03
HOMER3-201ENST00000221222 IFIT3O14879 490 aaKnown RBP27.73■■■□□ 2.03
HOMER3-201ENST00000221222 NDUFB10O96000 172 aa27.73■■■□□ 2.03
HOMER3-201ENST00000221222 EXOSC10Q01780 885 aaKnown RBP27.73■■■□□ 2.03
HOMER3-201ENST00000221222 PABPC4Q13310 644 aaKnown RBP eCLIP27.73■■■□□ 2.03
HOMER3-201ENST00000221222 IGDCC4Q8TDY8 1250 aa27.73■■■□□ 2.03
HOMER3-201ENST00000221222 TM6SF1Q9BZW5 370 aa27.73■■■□□ 2.03
HOMER3-201ENST00000221222 ERICH2A1L162 156 aa27.73■■■□□ 2.03
HOMER3-201ENST00000221222 WDR46O15213 610 aaKnown RBP27.73■■■□□ 2.03
HOMER3-201ENST00000221222 RGS19P49795 217 aa27.73■■■□□ 2.03
HOMER3-201ENST00000221222 SOX10P56693 466 aa27.73■■■□□ 2.03
HOMER3-201ENST00000221222 SPICE1Q8N0Z3 855 aa27.73■■■□□ 2.03
HOMER3-201ENST00000221222 PARP14Q460N5 1801 aa27.72■■■□□ 2.03
HOMER3-201ENST00000221222 TMEM67Q5HYA8 995 aa27.72■■■□□ 2.03
HOMER3-201ENST00000221222 IFIT1BQ5T764 474 aaKnown RBP27.72■■■□□ 2.03
HOMER3-201ENST00000221222 BLOC1S2Q6QNY1 142 aa27.72■■■□□ 2.03
HOMER3-201ENST00000221222 CFHR5Q9BXR6 569 aa27.72■■■□□ 2.03
HOMER3-201ENST00000221222 KAT14Q9H8E8 782 aa27.72■■■□□ 2.03
HOMER3-201ENST00000221222 USP17L15C9J2P7 530 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 USP17L13C9JLJ4 530 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 USP17L11C9JVI0 530 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 USP17L18D6R9N7 530 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 USP17L22D6RA61 530 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 USP17L17D6RBQ6 530 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 USP17L19D6RCP7 530 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 USP17L20D6RJB6 530 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 USP17L24Q0WX57 530 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 WTAPQ15007 396 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 SLFN13Q68D06 897 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 GMCL1Q96IK5 515 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms