RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C TRS65P32893 560 aa1.8□□□□□ -2.12
NIP100YPL174C STT3P39007 718 aaKnown RBP1.8□□□□□ -2.12
NIP100YPL174C PSF2P40359 213 aa1.8□□□□□ -2.12
NIP100YPL174C YJL107CP42947 387 aa1.8□□□□□ -2.12
NIP100YPL174C YRB30P53107 440 aaPredicted RBP1.8□□□□□ -2.12
NIP100YPL174C NNF2P53253 936 aa1.8□□□□□ -2.12
NIP100YPL174C ADE16P54113 591 aaKnown RBP1.8□□□□□ -2.12
NIP100YPL174C MLC2Q06580 163 aa1.8□□□□□ -2.12
NIP100YPL174C POS5Q06892 414 aa1.8□□□□□ -2.12
NIP100YPL174C IWR1Q07532 353 aaPredicted RBP1.8□□□□□ -2.12
NIP100YPL174C TPK1P06244 397 aa1.8□□□□□ -2.12
NIP100YPL174C GUK1P15454 187 aaKnown RBP1.8□□□□□ -2.12
NIP100YPL174C SIR1P21691 654 aa1.8□□□□□ -2.12
NIP100YPL174C OCT1P35999 772 aa1.8□□□□□ -2.12
NIP100YPL174C DJP1P40564 432 aa1.8□□□□□ -2.12
NIP100YPL174C YPR003CP53394 754 aa1.8□□□□□ -2.12
NIP100YPL174C SWF1Q04629 336 aa1.8□□□□□ -2.12
NIP100YPL174C ECI1Q05871 280 aa1.8□□□□□ -2.12
NIP100YPL174C STP3Q05937 343 aa1.8□□□□□ -2.12
NIP100YPL174C NRT1Q08485 598 aa1.8□□□□□ -2.12
NIP100YPL174C YLR112WQ12130 139 aa1.8□□□□□ -2.12
NIP100YPL174C RPB8P20436 146 aa1.79□□□□□ -2.12
NIP100YPL174C MAK32P23060 363 aa1.79□□□□□ -2.12
NIP100YPL174C RFA2P26754 273 aaKnown RBP1.79□□□□□ -2.12
NIP100YPL174C SOF1P33750 489 aaKnown RBP1.79□□□□□ -2.12
NIP100YPL174C TOM20P35180 183 aa1.79□□□□□ -2.12
NIP100YPL174C BZZ1P38822 633 aa1.79□□□□□ -2.12
NIP100YPL174C MRX1P40050 688 aa1.79□□□□□ -2.12
NIP100YPL174C ERR3P42222 437 aa1.79□□□□□ -2.12
NIP100YPL174C DCP2P53550 970 aaKnown RBP1.79□□□□□ -2.12
NIP100YPL174C FMP42Q04991 504 aa1.79□□□□□ -2.12
NIP100YPL174C UTP21Q06078 939 aaPredicted RBP1.79□□□□□ -2.12
NIP100YPL174C PIF1P07271 859 aa1.79□□□□□ -2.12
NIP100YPL174C YER190C-BP0CX94 160 aa1.79□□□□□ -2.12
NIP100YPL174C YEL077W-AP0CX95 160 aa1.79□□□□□ -2.12
NIP100YPL174C YGR296C-BP0CX96 160 aa1.79□□□□□ -2.12
NIP100YPL174C YPL283W-BP0CX97 160 aa1.79□□□□□ -2.12
NIP100YPL174C YPR204C-AP0CX98 160 aa1.79□□□□□ -2.12
NIP100YPL174C YCR043CP25361 127 aa1.79□□□□□ -2.12
NIP100YPL174C URK1P27515 501 aa1.79□□□□□ -2.12
NIP100YPL174C PTP2P29461 750 aa1.79□□□□□ -2.12
NIP100YPL174C HES1P35843 434 aa1.79□□□□□ -2.12
NIP100YPL174C RRP3P38712 501 aaKnown RBP1.79□□□□□ -2.12
NIP100YPL174C FSH1P38777 243 aaKnown RBP1.79□□□□□ -2.12
NIP100YPL174C TAM41P53230 385 aa1.79□□□□□ -2.12
NIP100YPL174C RPL15BP54780 204 aaPredicted RBP1.79□□□□□ -2.12
NIP100YPL174C MET14Q02196 202 aa1.79□□□□□ -2.12
NIP100YPL174C TRS130Q03660 1102 aa1.79□□□□□ -2.12
NIP100YPL174C YLR281CQ05863 155 aa1.79□□□□□ -2.12
NIP100YPL174C MLH2Q07980 695 aa1.79□□□□□ -2.12
NIP100YPL174C TAH18Q12181 623 aa1.79□□□□□ -2.12
NIP100YPL174C YOR111WQ99210 232 aa1.79□□□□□ -2.12
NIP100YPL174C CYB2P00175 591 aa1.78□□□□□ -2.12
NIP100YPL174C CDC15P27636 974 aa1.78□□□□□ -2.12
NIP100YPL174C ADE17P38009 592 aaKnown RBP1.78□□□□□ -2.12
NIP100YPL174C UME6P39001 836 aa1.78□□□□□ -2.12
NIP100YPL174C CEG1Q01159 459 aaPredicted RBP1.78□□□□□ -2.12
NIP100YPL174C SWA2Q06677 668 aa1.78□□□□□ -2.12
NIP100YPL174C SRL1Q08673 210 aa1.78□□□□□ -2.12
NIP100YPL174C GPN2Q08726 347 aaPredicted RBP1.78□□□□□ -2.12
NIP100YPL174C SWT1Q12104 458 aa1.78□□□□□ -2.12
NIP100YPL174C ERG27Q12452 347 aaKnown RBP1.78□□□□□ -2.12
NIP100YPL174C ATP2P00830 511 aaKnown RBP1.78□□□□□ -2.12
NIP100YPL174C CBP1P07252 654 aa1.78□□□□□ -2.12
NIP100YPL174C NUC1P08466 329 aa1.78□□□□□ -2.12
NIP100YPL174C MCM3P24279 971 aaKnown RBP1.78□□□□□ -2.12
NIP100YPL174C YCP4P25349 247 aaKnown RBP1.78□□□□□ -2.12
NIP100YPL174C RFC1P38630 861 aaKnown RBP1.78□□□□□ -2.12
NIP100YPL174C TES1P41903 349 aaKnown RBP1.78□□□□□ -2.12
NIP100YPL174C CRZ1P53968 678 aa1.78□□□□□ -2.12
NIP100YPL174C BET4Q00618 327 aa1.78□□□□□ -2.12
NIP100YPL174C Q0010Q9ZZX9 128 aa1.78□□□□□ -2.12
NIP100YPL174C SPO16P17122 198 aa1.77□□□□□ -2.13
NIP100YPL174C CCT4P39078 528 aaKnown RBP1.77□□□□□ -2.13
NIP100YPL174C PSP1P50896 841 aaKnown RBP1.77□□□□□ -2.13
NIP100YPL174C GTB1Q04924 702 aa1.77□□□□□ -2.13
NIP100YPL174C BAG7Q12128 409 aa1.77□□□□□ -2.13
NIP100YPL174C COX17Q12287 69 aa1.77□□□□□ -2.13
NIP100YPL174C RAP1P11938 827 aa1.77□□□□□ -2.13
NIP100YPL174C PRO3P32263 286 aaKnown RBP1.77□□□□□ -2.13
NIP100YPL174C TFC3P34111 1160 aa1.77□□□□□ -2.13
NIP100YPL174C MNN2P38069 597 aa1.77□□□□□ -2.13
NIP100YPL174C QRI7P43122 407 aa1.77□□□□□ -2.13
NIP100YPL174C PEX8P53248 589 aa1.77□□□□□ -2.13
NIP100YPL174C YNL181WP53878 407 aa1.77□□□□□ -2.13
NIP100YPL174C NDD1Q08887 554 aa1.77□□□□□ -2.13
NIP100YPL174C FRE3Q08905 711 aa1.77□□□□□ -2.13
NIP100YPL174C YER145C-AA0A023PYF4 145 aa1.76□□□□□ -2.13
NIP100YPL174C NOP1P15646 327 aaKnown RBP1.76□□□□□ -2.13
NIP100YPL174C RKM3P38222 552 aa1.76□□□□□ -2.13
NIP100YPL174C SGF73P53165 657 aa1.76□□□□□ -2.13
NIP100YPL174C CRN1Q06440 651 aa1.76□□□□□ -2.13
NIP100YPL174C ATG23Q06671 453 aa1.76□□□□□ -2.13
NIP100YPL174C RGT1P32862 1170 aa1.76□□□□□ -2.13
NIP100YPL174C CNS1P33313 385 aa1.76□□□□□ -2.13
NIP100YPL174C KTR3P38130 404 aaPredicted RBP1.76□□□□□ -2.13
NIP100YPL174C RTT107P38850 1070 aa1.76□□□□□ -2.13
NIP100YPL174C YIL152WP40455 235 aa1.76□□□□□ -2.13
NIP100YPL174C SUL2Q12325 893 aa1.76□□□□□ -2.13
NIP100YPL174C GAL1P04385 528 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms