RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	HPC2	Q01448	625 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	OYE2	Q03558	400 aa	Known RBP	7.2	□□□□□ -1.26
MSB3	YNL293W	UTP14	Q04500	899 aa	Known RBP	7.2	□□□□□ -1.26
MSB3	YNL293W	KAR5	Q04746	504 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	PEX10	Q05568	337 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	SPH1	Q06160	661 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	DSE3	Q08729	430 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	MSC6	Q08818	692 aa	Known RBP	7.2	□□□□□ -1.26
MSB3	YNL293W	WRS1	Q12109	432 aa	Known RBP	7.2	□□□□□ -1.26
MSB3	YNL293W	YHR213W-A	Q8TGT4	77 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	RPL22A	P05749	121 aa	Known RBP	7.19	□□□□□ -1.26
MSB3	YNL293W	CHS2	P14180	963 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	VPS33	P20795	691 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	CMK2	P22517	447 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	MRPL37	P36532	105 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	GND1	P38720	489 aa	Known RBP	7.19	□□□□□ -1.26
MSB3	YNL293W	ORC6	P38826	435 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	POP2	P39008	433 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	YAT2	P40017	923 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	PIG2	P40187	538 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	DPH1	P40487	425 aa	Known RBP	7.19	□□□□□ -1.26
MSB3	YNL293W	EMC2	P47133	292 aa	Known RBP	7.19	□□□□□ -1.26
MSB3	YNL293W	YJR098C	P47139	656 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	USE1	P53146	245 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	ATG16	Q03818	150 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	RGA2	Q06407	1009 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	REC8	Q12188	680 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	HOM2	P13663	365 aa	Known RBP	7.19	□□□□□ -1.26
MSB3	YNL293W	KGD1	P20967	1014 aa	Known RBP	7.19	□□□□□ -1.26
MSB3	YNL293W	SPO11	P23179	398 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	CCR4	P31384	837 aa	Known RBP	7.19	□□□□□ -1.26
MSB3	YNL293W	SPT14	P32363	452 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	HBS1	P32769	611 aa	Known RBP	7.19	□□□□□ -1.26
MSB3	YNL293W	MTC2	P34246	357 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	MAE1	P36013	669 aa	Known RBP	7.19	□□□□□ -1.26
MSB3	YNL293W	DIA4	P38705	446 aa	Predicted RBP	7.19	□□□□□ -1.26
MSB3	YNL293W	CSM2	P40465	213 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	YDR286C	Q05530	114 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	PNP1	Q05788	311 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	GSH2	Q08220	491 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	DGK1	Q12382	290 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	SKM1	Q12469	655 aa		7.19	□□□□□ -1.26
MSB3	YNL293W	MLP1	Q02455	1875 aa	Known RBP	7.18	□□□□□ -1.26
MSB3	YNL293W	VTH2	P40890	1549 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	ABF1	P14164	731 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	DMC1	P25453	334 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	HXT1	P32465	570 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	PET127	P32606	800 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	TFB1	P32776	642 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	YPK3	P38070	525 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	YBR032W	P38223	100 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	PEX32	P38292	413 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	NEM1	P38757	446 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	UFE1	P41834	346 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	YJL016W	P47072	561 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	SEH1	P53011	349 aa	Known RBP	7.18	□□□□□ -1.26
MSB3	YNL293W	PBP1	P53297	722 aa	Known RBP	7.18	□□□□□ -1.26
MSB3	YNL293W	CPR6	P53691	371 aa	Known RBP	7.18	□□□□□ -1.26
MSB3	YNL293W	ASI2	P53895	289 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	YDR131C	Q03899	556 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	UFO1	Q04511	668 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	KAP95	Q06142	861 aa	Known RBP	7.18	□□□□□ -1.26
MSB3	YNL293W	LUC7	Q07508	261 aa	Predicted RBP	7.18	□□□□□ -1.26
MSB3	YNL293W	COS7	Q07788	383 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	FEX2	Q08991	375 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	YOR214C	Q12282	236 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	AI5_ALPHA	Q9ZZX1	630 aa		7.18	□□□□□ -1.26
MSB3	YNL293W	MET6	P05694	767 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	GPH1	P06738	902 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	RPC40	P07703	335 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	RGR1	P19263	1082 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	YSP3	P25036	478 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	FUN26	P31381	517 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	CDC13	P32797	924 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	YBR238C	P38330	731 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	GOS1	P38736	223 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	RIM4	P38741	713 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	STM1	P39015	273 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	GPB2	P39717	880 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	ASG1	P40467	964 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	THI11	P47183	340 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	MND1	P53102	219 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	YGL036W	P53185	909 aa	Predicted RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	YGR122W	P53272	402 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	MRPL13	Q02204	264 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	ARL3	Q02804	198 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	UME1	Q03010	460 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	YDR541C	Q03049	344 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	SRT1	Q03175	343 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	YEH1	Q07804	573 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	AKR2	Q12013	749 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	COR1	P07256	457 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	MIS1	P09440	975 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	KIN1	P13185	1064 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	CDC23	P16522	626 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	PRP9	P19736	530 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	TRX1	P22217	103 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	SGV1	P23293	657 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	SKG1	P36169	355 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	GLY1	P37303	387 aa	Known RBP	7.17	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms