RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C SWP82P43554 623 aa3.74□□□□□ -1.81
WHI3YNL197C SGM1P47166 707 aa3.74□□□□□ -1.81
WHI3YNL197C URN1Q06525 465 aaKnown RBP3.74□□□□□ -1.81
WHI3YNL197C HBT1Q07653 1046 aaKnown RBP3.74□□□□□ -1.81
WHI3YNL197C YPL272CQ08984 517 aa3.74□□□□□ -1.81
WHI3YNL197C AI5_ALPHAQ9ZZX1 630 aa3.74□□□□□ -1.81
WHI3YNL197C SES1P07284 462 aaKnown RBP3.73□□□□□ -1.81
WHI3YNL197C SRP54P20424 541 aaKnown RBP3.73□□□□□ -1.81
WHI3YNL197C RRP43P25359 394 aaPredicted RBP3.73□□□□□ -1.81
WHI3YNL197C JNM1P36224 373 aa3.73□□□□□ -1.81
WHI3YNL197C NOP4P37838 685 aaKnown RBP3.73□□□□□ -1.81
WHI3YNL197C YFL015CP43578 164 aa3.73□□□□□ -1.81
WHI3YNL197C MRX6P48564 524 aa3.73□□□□□ -1.81
WHI3YNL197C ASN1P49089 572 aaKnown RBP3.73□□□□□ -1.81
WHI3YNL197C YGL036WP53185 909 aaPredicted RBP3.73□□□□□ -1.81
WHI3YNL197C VPS75P53853 264 aa3.73□□□□□ -1.81
WHI3YNL197C MFB1Q04922 465 aa3.73□□□□□ -1.81
WHI3YNL197C YML053CQ04978 212 aa3.73□□□□□ -1.81
WHI3YNL197C MDM20Q12387 796 aaKnown RBP3.73□□□□□ -1.81
WHI3YNL197C YJU2P28320 278 aaPredicted RBP3.72□□□□□ -1.81
WHI3YNL197C MOH1P38191 138 aa3.72□□□□□ -1.81
WHI3YNL197C LNP1P38878 278 aa3.72□□□□□ -1.81
WHI3YNL197C DJP1P40564 432 aa3.72□□□□□ -1.81
WHI3YNL197C IME4P41833 600 aa3.72□□□□□ -1.81
WHI3YNL197C TDA10P42938 290 aa3.72□□□□□ -1.81
WHI3YNL197C LYS4P49367 693 aaPredicted RBP3.72□□□□□ -1.81
WHI3YNL197C DSD1P53095 428 aa3.72□□□□□ -1.81
WHI3YNL197C CPR8P53728 308 aa3.72□□□□□ -1.81
WHI3YNL197C ARG7Q04728 441 aa3.72□□□□□ -1.81
WHI3YNL197C NUS1Q12063 375 aa3.72□□□□□ -1.81
WHI3YNL197C BAG7Q12128 409 aa3.72□□□□□ -1.81
WHI3YNL197C TAH18Q12181 623 aa3.72□□□□□ -1.81
WHI3YNL197C ERG27Q12452 347 aaKnown RBP3.72□□□□□ -1.81
WHI3YNL197C SPE4Q12455 300 aa3.72□□□□□ -1.81
WHI3YNL197C TPK2P06245 380 aa3.72□□□□□ -1.81
WHI3YNL197C PMA2P19657 947 aa3.72□□□□□ -1.81
WHI3YNL197C SEC24P40482 926 aaKnown RBP3.72□□□□□ -1.81
WHI3YNL197C MRPL19P53875 158 aa3.72□□□□□ -1.81
WHI3YNL197C WAR1Q03631 944 aa3.72□□□□□ -1.81
WHI3YNL197C PLM2Q04383 521 aa3.72□□□□□ -1.81
WHI3YNL197C YPL191CQ08930 360 aa3.72□□□□□ -1.81
WHI3YNL197C MRH1Q12117 320 aaPredicted RBP3.72□□□□□ -1.81
WHI3YNL197C SCM3Q12334 223 aa3.72□□□□□ -1.81
WHI3YNL197C YBR126W-AQ8TGU7 68 aa3.72□□□□□ -1.81
WHI3YNL197C RPL7AP05737 244 aaKnown RBP3.71□□□□□ -1.82
WHI3YNL197C RPF2P36160 344 aaKnown RBP3.71□□□□□ -1.82
WHI3YNL197C UBP13P38187 747 aa3.71□□□□□ -1.82
WHI3YNL197C MTG2P38860 518 aa3.71□□□□□ -1.82
WHI3YNL197C FLC2P39719 783 aa3.71□□□□□ -1.82
WHI3YNL197C SAP1P39955 897 aaKnown RBP3.71□□□□□ -1.82
WHI3YNL197C JHD1P40034 492 aa3.71□□□□□ -1.82
WHI3YNL197C INA17Q02888 182 aa3.71□□□□□ -1.82
WHI3YNL197C TMN2Q04562 672 aa3.71□□□□□ -1.82
WHI3YNL197C UTP21Q06078 939 aaPredicted RBP3.71□□□□□ -1.82
WHI3YNL197C CTI6Q08923 506 aa3.71□□□□□ -1.82
WHI3YNL197C RPL7BQ12213 244 aaKnown RBP3.71□□□□□ -1.82
WHI3YNL197C SIP1P32578 815 aa3.71□□□□□ -1.82
WHI3YNL197C MTH1P35198 433 aa3.71□□□□□ -1.82
WHI3YNL197C VBA2P38358 474 aaKnown RBP3.71□□□□□ -1.82
WHI3YNL197C MUP3P38734 546 aa3.71□□□□□ -1.82
WHI3YNL197C FUN12P39730 1002 aaKnown RBP3.71□□□□□ -1.82
WHI3YNL197C LAS21P40367 830 aa3.71□□□□□ -1.82
WHI3YNL197C COG2P53271 262 aa3.71□□□□□ -1.82
WHI3YNL197C YGR250CP53316 781 aaKnown RBP3.71□□□□□ -1.82
WHI3YNL197C GND2P53319 492 aa3.71□□□□□ -1.82
WHI3YNL197C GIS1Q03833 894 aa3.71□□□□□ -1.82
WHI3YNL197C CRN1Q06440 651 aa3.71□□□□□ -1.82
WHI3YNL197C SWA2Q06677 668 aa3.71□□□□□ -1.82
WHI3YNL197C ERP4Q12450 207 aa3.71□□□□□ -1.82
WHI3YNL197C SEC3P33332 1336 aaKnown RBP3.7□□□□□ -1.82
WHI3YNL197C GCN4P03069 281 aa3.7□□□□□ -1.82
WHI3YNL197C LAC1P28496 418 aa3.7□□□□□ -1.82
WHI3YNL197C TFC3P34111 1160 aa3.7□□□□□ -1.82
WHI3YNL197C KES1P35844 434 aaKnown RBP3.7□□□□□ -1.82
WHI3YNL197C NTR2P36118 322 aaPredicted RBP3.7□□□□□ -1.82
WHI3YNL197C CCT6P39079 546 aa3.7□□□□□ -1.82
WHI3YNL197C EXO1P39875 702 aa3.7□□□□□ -1.82
WHI3YNL197C PHM8P40025 321 aa3.7□□□□□ -1.82
WHI3YNL197C SPO22P40511 975 aa3.7□□□□□ -1.82
WHI3YNL197C ADE16P54113 591 aaKnown RBP3.7□□□□□ -1.82
WHI3YNL197C YAT1P80235 687 aa3.7□□□□□ -1.82
WHI3YNL197C CTF4Q01454 927 aa3.7□□□□□ -1.82
WHI3YNL197C TIM44Q01852 431 aa3.7□□□□□ -1.82
WHI3YNL197C SKG3Q06315 1026 aa3.7□□□□□ -1.82
WHI3YNL197C RAD34Q06665 692 aa3.7□□□□□ -1.82
WHI3YNL197C NOP58Q12499 511 aaKnown RBP3.7□□□□□ -1.82
WHI3YNL197C ARG3P05150 338 aa3.69□□□□□ -1.82
WHI3YNL197C SEC53P07283 254 aaKnown RBP3.69□□□□□ -1.82
WHI3YNL197C STE12P13574 688 aa3.69□□□□□ -1.82
WHI3YNL197C KIN3P22209 435 aa3.69□□□□□ -1.82
WHI3YNL197C ERG3P32353 365 aa3.69□□□□□ -1.82
WHI3YNL197C GSH1P32477 678 aa3.69□□□□□ -1.82
WHI3YNL197C NPL6P32832 435 aa3.69□□□□□ -1.82
WHI3YNL197C OAR1P35731 278 aa3.69□□□□□ -1.82
WHI3YNL197C AAP1P37898 856 aaKnown RBP3.69□□□□□ -1.82
WHI3YNL197C VTC2P43585 828 aa3.69□□□□□ -1.82
WHI3YNL197C VPS73P53142 486 aaKnown RBP3.69□□□□□ -1.82
WHI3YNL197C YPL071CQ02864 156 aa3.69□□□□□ -1.82
WHI3YNL197C YDR109CQ04585 715 aa3.69□□□□□ -1.82
WHI3YNL197C GFD1Q04839 188 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms