RNA–Protein interactions for RNA: YHL035C

VMR1, Transcript of Vacuolar membrane protein, yeast

Gene VMR1, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMR1	YHL035C	PIL1	P53252	339 aa	Known RBP	2.19	□□□□□ -2.06
VMR1	YHL035C	SLK19	Q08581	821 aa	Known RBP	2.19	□□□□□ -2.06
VMR1	YHL035C	CDC16	P09798	840 aa		2.19	□□□□□ -2.06
VMR1	YHL035C	CDC24	P11433	854 aa	Predicted RBP	2.19	□□□□□ -2.06
VMR1	YHL035C	ADH7	P25377	361 aa		2.19	□□□□□ -2.06
VMR1	YHL035C	MRX1	P40050	688 aa		2.19	□□□□□ -2.06
VMR1	YHL035C	YFL015C	P43578	164 aa		2.19	□□□□□ -2.06
VMR1	YHL035C	IRC6	P43615	237 aa		2.19	□□□□□ -2.06
VMR1	YHL035C	NMA2	P53204	395 aa		2.19	□□□□□ -2.06
VMR1	YHL035C	YMR018W	Q04364	514 aa		2.19	□□□□□ -2.06
VMR1	YHL035C	CRF1	Q04930	467 aa		2.19	□□□□□ -2.06
VMR1	YHL035C	TSR2	Q06672	205 aa	Known RBP	2.19	□□□□□ -2.06
VMR1	YHL035C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.19	□□□□□ -2.06	not detected
VMR1	YHL035C	LEA1	Q08963	238 aa	Predicted RBP	2.19	□□□□□ -2.06
VMR1	YHL035C	TRM8	Q12009	286 aa		2.19	□□□□□ -2.06
VMR1	YHL035C	SFI1	Q12369	946 aa		2.19	□□□□□ -2.06
VMR1	YHL035C	HEM1	P09950	548 aa	Predicted RBP	2.18	□□□□□ -2.06
VMR1	YHL035C	GAC1	P28006	793 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	EMP70	P32802	667 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	CNS1	P33313	385 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	SNU114	P36048	1008 aa	Known RBP	2.18	□□□□□ -2.06
VMR1	YHL035C	LNP1	P38878	278 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	BPL1	P48445	690 aa	Predicted RBP	2.18	□□□□□ -2.06
VMR1	YHL035C	ASN1	P49089	572 aa	Known RBP	2.18	□□□□□ -2.06
VMR1	YHL035C	WAR1	Q03631	944 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	PLM2	Q04383	521 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	HIM1	Q06674	414 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	PSK2	Q08217	1101 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	PCL8	Q08966	492 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	GET3	Q12154	354 aa	Known RBP	2.18	□□□□□ -2.06
VMR1	YHL035C	ATP2	P00830	511 aa	Known RBP	2.18	□□□□□ -2.06
VMR1	YHL035C	ADE5,7	P07244	802 aa	Known RBP	2.18	□□□□□ -2.06
VMR1	YHL035C	RPN12	P32496	274 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	NFU1	P32860	256 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	NTR2	P36118	322 aa	Predicted RBP	2.18	□□□□□ -2.06
VMR1	YHL035C	EXO1	P39875	702 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	YSP3	P25036	478 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	ARO9	P38840	513 aa	Predicted RBP	2.18	□□□□□ -2.06
VMR1	YHL035C	SAE2	P46946	345 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	FIN1	Q03898	291 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	ICL2	Q12031	575 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	TAD3	Q9URQ3	322 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	CLB2	P24869	491 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	SWI4	P25302	1093 aa	Known RBP	2.18	□□□□□ -2.06
VMR1	YHL035C	MNT3	P40549	630 aa		2.18	□□□□□ -2.06
VMR1	YHL035C	TUB1	P09733	447 aa	Known RBP	2.17	□□□□□ -2.06
VMR1	YHL035C	SPO11	P23179	398 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	MBR1	P23493	339 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	OCA4	P25366	362 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	CMK1	P27466	446 aa	Known RBP	2.17	□□□□□ -2.06
VMR1	YHL035C	MUM2	P38236	366 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	FUN12	P39730	1002 aa	Known RBP	2.17	□□□□□ -2.06
VMR1	YHL035C	YJR061W	P40355	935 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	ESL1	P40456	1118 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	CDC1	P40986	491 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	APT1	P49435	187 aa	Known RBP	2.17	□□□□□ -2.06
VMR1	YHL035C	BOP3	P53958	396 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	CAC2	Q04199	468 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	SWF1	Q04629	336 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
VMR1	YHL035C	STE50	P25344	346 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	RKM3	P38222	552 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	FAR3	P46671	204 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	NPA3	P47122	385 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	YGR066C	P53242	292 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	NNF2	P53253	936 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	INN1	P53901	409 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	KRS1	P15180	591 aa	Known RBP	2.17	□□□□□ -2.06
VMR1	YHL035C	RRP43	P25359	394 aa	Predicted RBP	2.17	□□□□□ -2.06
VMR1	YHL035C	PTC6	P25646	442 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	GDA1	P32621	518 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	AGP2	P38090	596 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	DPH1	P40487	425 aa	Known RBP	2.17	□□□□□ -2.06
VMR1	YHL035C	CTK2	P46962	323 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	SGM1	P47166	707 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	YGR079W	P53249	370 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	SNO4	Q04902	237 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	HSP33	Q08914	237 aa	Known RBP	2.17	□□□□□ -2.06
VMR1	YHL035C	HSP32	Q08992	237 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	PRE8	P23639	250 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	FMP10	P40098	244 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	CFD1	P40558	293 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	ROK1	P45818	564 aa	Predicted RBP	2.17	□□□□□ -2.06
VMR1	YHL035C	COG1	P53079	417 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	TAM41	P53230	385 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	YNR061C	P53747	219 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	CBK1	P53894	756 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	SKG3	Q06315	1026 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	YDR056C	Q12025	205 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	AHA1	Q12449	350 aa	Known RBP	2.17	□□□□□ -2.06
VMR1	YHL035C	SKM1	Q12469	655 aa		2.17	□□□□□ -2.06
VMR1	YHL035C	CLC1	P17891	233 aa		2.16	□□□□□ -2.06
VMR1	YHL035C	MRPL9	P31334	269 aa		2.16	□□□□□ -2.06
VMR1	YHL035C	NOC2	P39744	710 aa	Known RBP	2.16	□□□□□ -2.06
VMR1	YHL035C	MET28	P40573	187 aa		2.16	□□□□□ -2.06
VMR1	YHL035C	ZAP1	P47043	880 aa		2.16	□□□□□ -2.06
VMR1	YHL035C	YMR178W	Q03219	274 aa	Known RBP	2.16	□□□□□ -2.06
VMR1	YHL035C	TRS23	Q03784	219 aa		2.16	□□□□□ -2.06
VMR1	YHL035C	SPC19	Q03954	165 aa		2.16	□□□□□ -2.06
VMR1	YHL035C	PIG1	Q06216	648 aa		2.16	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms