RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	STE2	D6VTK4	431 aa		4.09	□□□□□ -1.75
SPI1	YER150W	YLR302C	O13544	120 aa		4.09	□□□□□ -1.75
SPI1	YER150W	TUB2	P02557	457 aa	Known RBP	4.09	□□□□□ -1.75
SPI1	YER150W	CDC36	P06100	191 aa	Predicted RBP	4.09	□□□□□ -1.75
SPI1	YER150W	ARG80	P07249	177 aa		4.09	□□□□□ -1.75
SPI1	YER150W	ARO3	P14843	370 aa	Known RBP	4.09	□□□□□ -1.75
SPI1	YER150W	CKA2	P19454	339 aa		4.09	□□□□□ -1.75
SPI1	YER150W	MSB1	P21339	1137 aa	Known RBP	4.09	□□□□□ -1.75
SPI1	YER150W	OSM1	P21375	501 aa	Known RBP	4.09	□□□□□ -1.75
SPI1	YER150W	NFS1	P25374	497 aa		4.09	□□□□□ -1.75
SPI1	YER150W	YCR016W	P25617	290 aa	Known RBP	4.09	□□□□□ -1.75
SPI1	YER150W	RSM22	P36056	628 aa		4.09	□□□□□ -1.75
SPI1	YER150W	SRO77	P38163	1010 aa		4.09	□□□□□ -1.75
SPI1	YER150W	VID24	P38263	362 aa		4.09	□□□□□ -1.75
SPI1	YER150W	EXO5	P38289	585 aa		4.09	□□□□□ -1.75
SPI1	YER150W	MNN9	P39107	395 aa	Known RBP	4.09	□□□□□ -1.75
SPI1	YER150W	YEL057C	P39983	233 aa		4.09	□□□□□ -1.75
SPI1	YER150W	UTP7	P40055	554 aa	Known RBP	4.09	□□□□□ -1.75
SPI1	YER150W	RRT14	P40470	206 aa		4.09	□□□□□ -1.75
SPI1	YER150W	CAK1	P43568	368 aa	Predicted RBP	4.09	□□□□□ -1.75
SPI1	YER150W	ABM1	P47146	123 aa		4.09	□□□□□ -1.75
SPI1	YER150W	TOM22	P49334	152 aa		4.09	□□□□□ -1.75
SPI1	YER150W	PPT1	P53043	513 aa		4.09	□□□□□ -1.75
SPI1	YER150W	YNL165W	P53891	406 aa		4.09	□□□□□ -1.75
SPI1	YER150W	ESBP6	P53918	673 aa		4.09	□□□□□ -1.75
SPI1	YER150W	RPM2	Q02773	1202 aa		4.09	□□□□□ -1.75
SPI1	YER150W	NGL3	Q03210	505 aa		4.09	□□□□□ -1.75
SPI1	YER150W	YMR210W	Q03649	449 aa		4.09	□□□□□ -1.75
SPI1	YER150W	VPS20	Q04272	221 aa		4.09	□□□□□ -1.75
SPI1	YER150W	UFO1	Q04511	668 aa		4.09	□□□□□ -1.75
SPI1	YER150W	YLR297W	Q05899	129 aa		4.09	□□□□□ -1.75
SPI1	YER150W	YLR173W	Q06247	608 aa		4.09	□□□□□ -1.75
SPI1	YER150W	PEX19	Q07418	342 aa		4.09	□□□□□ -1.75
SPI1	YER150W	ULA1	Q12059	462 aa		4.09	□□□□□ -1.75
SPI1	YER150W	DIN7	Q12086	430 aa		4.09	□□□□□ -1.75
SPI1	YER150W	LEU9	Q12166	604 aa	Known RBP	4.09	□□□□□ -1.75
SPI1	YER150W	GIS3	Q12418	502 aa		4.09	□□□□□ -1.75
SPI1	YER150W	NBL1	Q3E7Y6	73 aa		4.09	□□□□□ -1.75
SPI1	YER150W	RAD61	Q99359	647 aa		4.09	□□□□□ -1.75
SPI1	YER150W	STE3	P06783	470 aa		4.08	□□□□□ -1.76
SPI1	YER150W	YEL076C-A	P0CX16	216 aa		4.08	□□□□□ -1.76
SPI1	YER150W	YLR464W	P0CX17	216 aa		4.08	□□□□□ -1.76
SPI1	YER150W	RPC31	P17890	251 aa		4.08	□□□□□ -1.76
SPI1	YER150W	ERG6	P25087	383 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	SWI4	P25302	1093 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	PDC6	P26263	563 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	CRM1	P30822	1084 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	MRP20	P32387	263 aa		4.08	□□□□□ -1.76
SPI1	YER150W	CDC12	P32468	407 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SPI1	YER150W	SEC3	P33332	1336 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	MKS1	P34072	584 aa		4.08	□□□□□ -1.76
SPI1	YER150W	KKQ8	P36004	724 aa		4.08	□□□□□ -1.76
SPI1	YER150W	ATP3	P38077	311 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	MCX1	P38323	520 aa	Predicted RBP	4.08	□□□□□ -1.76
SPI1	YER150W	FSH1	P38777	243 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	PNT1	P38969	423 aa		4.08	□□□□□ -1.76
SPI1	YER150W	YEL076C	P39971	216 aa		4.08	□□□□□ -1.76
SPI1	YER150W	RTR1	P40084	226 aa	Predicted RBP	4.08	□□□□□ -1.76
SPI1	YER150W	RGI2	P40188	164 aa		4.08	□□□□□ -1.76
SPI1	YER150W	YIL165C	P40446	119 aa		4.08	□□□□□ -1.76
SPI1	YER150W	VID28	P40547	921 aa		4.08	□□□□□ -1.76
SPI1	YER150W	MET28	P40573	187 aa		4.08	□□□□□ -1.76
SPI1	YER150W	YFR018C	P43599	363 aa		4.08	□□□□□ -1.76
SPI1	YER150W	SMC3	P47037	1230 aa		4.08	□□□□□ -1.76
SPI1	YER150W	EMC2	P47133	292 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	TAF4	P50105	388 aa		4.08	□□□□□ -1.76
SPI1	YER150W	IMA1	P53051	589 aa		4.08	□□□□□ -1.76
SPI1	YER150W	SCW11	P53189	542 aa		4.08	□□□□□ -1.76
SPI1	YER150W	YGR067C	P53243	804 aa		4.08	□□□□□ -1.76
SPI1	YER150W	YML133C	Q03099	1374 aa		4.08	□□□□□ -1.76
SPI1	YER150W	CLU1	Q03690	1277 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	PPM1	Q04081	328 aa		4.08	□□□□□ -1.76
SPI1	YER150W	RCO1	Q04779	684 aa		4.08	□□□□□ -1.76
SPI1	YER150W	GTO3	Q04806	366 aa		4.08	□□□□□ -1.76
SPI1	YER150W	TRI1	Q05024	226 aa		4.08	□□□□□ -1.76
SPI1	YER150W	RTC1	Q08281	1341 aa		4.08	□□□□□ -1.76
SPI1	YER150W	DCI1	Q08558	271 aa		4.08	□□□□□ -1.76
SPI1	YER150W	VIK1	Q12045	647 aa		4.08	□□□□□ -1.76
SPI1	YER150W	RIO1	Q12196	484 aa	Known RBP	4.08	□□□□□ -1.76
SPI1	YER150W	HOS1	Q12214	470 aa		4.08	□□□□□ -1.76
SPI1	YER150W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.08	□□□□□ -1.76
SPI1	YER150W	YLL066C	Q99208	1374 aa		4.08	□□□□□ -1.76
SPI1	YER150W	ISN1	Q99312	450 aa		4.08	□□□□□ -1.76
SPI1	YER150W	TEF1	P02994	458 aa	Known RBP	4.07	□□□□□ -1.76
SPI1	YER150W	HXK2	P04807	486 aa	Known RBP	4.07	□□□□□ -1.76
SPI1	YER150W	PET494	P07390	489 aa	Predicted RBP	4.07	□□□□□ -1.76
SPI1	YER150W	GLN4	P13188	809 aa	Known RBP	4.07	□□□□□ -1.76
SPI1	YER150W	CDC26	P14724	124 aa		4.07	□□□□□ -1.76
SPI1	YER150W	SEN2	P16658	377 aa		4.07	□□□□□ -1.76
SPI1	YER150W	YPK2	P18961	677 aa		4.07	□□□□□ -1.76
SPI1	YER150W	PRP2	P20095	876 aa	Predicted RBP	4.07	□□□□□ -1.76
SPI1	YER150W	DAL81	P21657	970 aa		4.07	□□□□□ -1.76
SPI1	YER150W	RIT1	P23796	513 aa		4.07	□□□□□ -1.76
SPI1	YER150W	MCM4	P30665	933 aa	Known RBP	4.07	□□□□□ -1.76
SPI1	YER150W	AFG1	P32317	509 aa		4.07	□□□□□ -1.76
SPI1	YER150W	SEF1	P34228	1148 aa		4.07	□□□□□ -1.76
SPI1	YER150W	CST26	P38226	397 aa		4.07	□□□□□ -1.76
SPI1	YER150W	REG2	P38232	338 aa		4.07	□□□□□ -1.76
SPI1	YER150W	KSP1	P38691	1029 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms