RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C MKT1P40850 830 aaKnown RBP2.83□□□□□ -1.96
RTR1YER139C YER145C-AA0A023PYF4 145 aa2.82□□□□□ -1.96
RTR1YER139C CTT1P06115 562 aa2.82□□□□□ -1.96
RTR1YER139C CBS2P14905 389 aa2.82□□□□□ -1.96
RTR1YER139C SWC3P31376 625 aa2.82□□□□□ -1.96
RTR1YER139C RPN2P32565 945 aaKnown RBP2.82□□□□□ -1.96
RTR1YER139C RIM2P38127 377 aa2.82□□□□□ -1.96
RTR1YER139C SSP120P39931 234 aaKnown RBP2.82□□□□□ -1.96
RTR1YER139C POL31P46957 487 aa2.82□□□□□ -1.96
RTR1YER139C BSC1Q12140 328 aa2.82□□□□□ -1.96
RTR1YER139C DBP10Q12389 995 aaKnown RBP2.82□□□□□ -1.96
RTR1YER139C COX1P00401 534 aa2.81□□□□□ -1.96
RTR1YER139C MSH1P25846 959 aa2.81□□□□□ -1.96
RTR1YER139C BUD14P27637 709 aa2.81□□□□□ -1.96
RTR1YER139C TRS65P32893 560 aa2.81□□□□□ -1.96
RTR1YER139C SWH1P35845 1188 aa2.81□□□□□ -1.96
RTR1YER139C ZAP1P47043 880 aa2.81□□□□□ -1.96
RTR1YER139C YGL081WP53156 320 aa2.81□□□□□ -1.96
RTR1YER139C PPT2Q12036 173 aa2.81□□□□□ -1.96
RTR1YER139C YBR255C-AQ3E776 120 aa2.81□□□□□ -1.96
RTR1YER139C YTA7P40340 1379 aa2.8□□□□□ -1.96
RTR1YER139C LDB16P25587 256 aa2.8□□□□□ -1.96
RTR1YER139C YNR029CP53729 429 aaKnown RBP2.8□□□□□ -1.96
RTR1YER139C UTP21Q06078 939 aaPredicted RBP2.8□□□□□ -1.96
RTR1YER139C HES1P35843 434 aa2.79□□□□□ -1.96
RTR1YER139C YJR061WP40355 935 aa2.79□□□□□ -1.96
RTR1YER139C DUG1P43616 481 aaKnown RBP2.79□□□□□ -1.96
RTR1YER139C YGR237CP50089 785 aa2.79□□□□□ -1.96
RTR1YER139C YNL234WP53857 426 aa2.79□□□□□ -1.96
RTR1YER139C YDR415CQ04033 374 aaPredicted RBP2.79□□□□□ -1.96
RTR1YER139C UTP14Q04500 899 aaKnown RBP2.79□□□□□ -1.96
RTR1YER139C ECM38Q05902 660 aaPredicted RBP2.79□□□□□ -1.96
RTR1YER139C PDR3P33200 976 aa2.78□□□□□ -1.96
RTR1YER139C FUN12P39730 1002 aaKnown RBP2.78□□□□□ -1.96
RTR1YER139C SPC105P53148 917 aa2.78□□□□□ -1.96
RTR1YER139C YGR079WP53249 370 aa2.78□□□□□ -1.96
RTR1YER139C HOL1P53389 586 aa2.78□□□□□ -1.96
RTR1YER139C ESF2P53743 316 aaKnown RBP2.78□□□□□ -1.96
RTR1YER139C YNL034WP53963 612 aa2.78□□□□□ -1.96
RTR1YER139C GUK1P15454 187 aaKnown RBP2.77□□□□□ -1.97
RTR1YER139C COX11P19516 300 aaKnown RBP2.77□□□□□ -1.97
RTR1YER139C YPK3P38070 525 aa2.77□□□□□ -1.97
RTR1YER139C RRT2P38332 387 aa2.77□□□□□ -1.97
RTR1YER139C SPG5P42933 373 aa2.77□□□□□ -1.97
RTR1YER139C NIT2P47016 307 aa2.77□□□□□ -1.97
RTR1YER139C TRI1Q05024 226 aa2.77□□□□□ -1.97
RTR1YER139C PSF3Q12146 194 aa2.77□□□□□ -1.97
RTR1YER139C YIR014WP40570 242 aa2.76□□□□□ -1.97
RTR1YER139C UBX6P47049 396 aa2.76□□□□□ -1.97
RTR1YER139C BOR1P53838 576 aa2.76□□□□□ -1.97
RTR1YER139C RSF1Q05043 376 aa2.76□□□□□ -1.97
RTR1YER139C YLR455WQ06188 304 aa2.76□□□□□ -1.97
RTR1YER139C MRP2P10663 115 aaPredicted RBP2.75□□□□□ -1.97
RTR1YER139C LSB5P25369 354 aa2.75□□□□□ -1.97
RTR1YER139C RTS1P38903 757 aa2.75□□□□□ -1.97
RTR1YER139C VPS64Q03944 604 aa2.75□□□□□ -1.97
RTR1YER139C YDR109CQ04585 715 aa2.75□□□□□ -1.97
RTR1YER139C MCP2Q06567 569 aa2.75□□□□□ -1.97
RTR1YER139C AIM6Q07716 390 aa2.75□□□□□ -1.97
RTR1YER139C CSR2Q12734 1121 aa2.75□□□□□ -1.97
RTR1YER139C SUI3P09064 285 aaKnown RBP2.74□□□□□ -1.97
RTR1YER139C PGI1P12709 554 aaKnown RBP2.74□□□□□ -1.97
RTR1YER139C EMP65P40085 556 aa2.74□□□□□ -1.97
RTR1YER139C YJR142WP47173 342 aa2.74□□□□□ -1.97
RTR1YER139C ASI1P54074 624 aa2.74□□□□□ -1.97
RTR1YER139C EKI1Q03764 534 aa2.74□□□□□ -1.97
RTR1YER139C YLR049CQ12110 428 aa2.74□□□□□ -1.97
RTR1YER139C YLL056CQ12177 298 aa2.74□□□□□ -1.97
RTR1YER139C GLN3P18494 730 aa2.73□□□□□ -1.97
RTR1YER139C SLD3P53135 668 aa2.73□□□□□ -1.97
RTR1YER139C RTS2P40962 232 aa2.72□□□□□ -1.97
RTR1YER139C IAH1P41734 238 aa2.72□□□□□ -1.97
RTR1YER139C YPI1P43587 155 aa2.72□□□□□ -1.97
RTR1YER139C ASK10P48361 1146 aa2.72□□□□□ -1.97
RTR1YER139C PEX15Q08215 383 aa2.72□□□□□ -1.97
RTR1YER139C PCT1P13259 424 aa2.71□□□□□ -1.98
RTR1YER139C PHM8P40025 321 aa2.71□□□□□ -1.98
RTR1YER139C SCS2P40075 244 aaKnown RBP2.71□□□□□ -1.98
RTR1YER139C FET5P43561 622 aa2.71□□□□□ -1.98
RTR1YER139C SGF73P53165 657 aa2.71□□□□□ -1.98
RTR1YER139C CTL1Q03220 320 aaKnown RBP2.71□□□□□ -1.98
RTR1YER139C STE50P25344 346 aa2.7□□□□□ -1.98
RTR1YER139C HEM12P32347 362 aaPredicted RBP2.7□□□□□ -1.98
RTR1YER139C MDM31P38880 579 aa2.7□□□□□ -1.98
RTR1YER139C MSY1P48527 492 aa2.7□□□□□ -1.98
RTR1YER139C ADE16P54113 591 aaKnown RBP2.7□□□□□ -1.98
RTR1YER139C CRD1Q07560 283 aa2.7□□□□□ -1.98
RTR1YER139C PSR2Q07949 397 aa2.7□□□□□ -1.98
RTR1YER139C EDE1P34216 1381 aa2.7□□□□□ -1.98
RTR1YER139C VAS1P07806 1104 aaKnown RBP2.69□□□□□ -1.98
RTR1YER139C TGL1P34163 548 aa2.69□□□□□ -1.98
RTR1YER139C YLF2P38746 405 aa2.69□□□□□ -1.98
RTR1YER139C IMA5P40884 581 aa2.69□□□□□ -1.98
RTR1YER139C AAD4Q07747 329 aa2.69□□□□□ -1.98
RTR1YER139C MRS3P10566 314 aa2.68□□□□□ -1.98
RTR1YER139C PHO3P24031 467 aa2.68□□□□□ -1.98
RTR1YER139C LOS1P33418 1100 aaPredicted RBP2.68□□□□□ -1.98
RTR1YER139C APJ1P53940 528 aa2.68□□□□□ -1.98
RTR1YER139C YMR178WQ03219 274 aaKnown RBP2.68□□□□□ -1.98
RTR1YER139C ARP10Q04549 284 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms