RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C VPS9P54787 451 aa6.32□□□□□ -1.4
VPS61YDR136C SLG1P54867 378 aa6.32□□□□□ -1.4
VPS61YDR136C YDR179W-AQ03983 463 aa6.32□□□□□ -1.4
VPS61YDR136C DFG5Q05031 458 aa6.32□□□□□ -1.4
VPS61YDR136C FAR10Q06001 478 aa6.32□□□□□ -1.4
VPS61YDR136C ATG26Q06321 1198 aa6.32□□□□□ -1.4
VPS61YDR136C SUI3P09064 285 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C SBP1P10080 294 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C GLN3P18494 730 aa6.31□□□□□ -1.4
VPS61YDR136C HSP60P19882 572 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C CNA1P23287 553 aa6.31□□□□□ -1.4
VPS61YDR136C DPB2P24482 689 aaPredicted RBP6.31□□□□□ -1.4
VPS61YDR136C YCL068CP25593 260 aa6.31□□□□□ -1.4
VPS61YDR136C ADY2P25613 283 aa6.31□□□□□ -1.4
VPS61YDR136C CCR4P31384 837 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C HEM12P32347 362 aaPredicted RBP6.31□□□□□ -1.4
VPS61YDR136C RPT1P33299 467 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C SEC66P33754 206 aa6.31□□□□□ -1.4
VPS61YDR136C DEF1P35732 738 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C AGP2P38090 596 aa6.31□□□□□ -1.4
VPS61YDR136C ARN1P38731 627 aa6.31□□□□□ -1.4
VPS61YDR136C LAM1P38851 1228 aa6.31□□□□□ -1.4
VPS61YDR136C NUP60P39705 539 aa6.31□□□□□ -1.4
VPS61YDR136C FIR1P40020 876 aa6.31□□□□□ -1.4
VPS61YDR136C KTR7P40504 517 aa6.31□□□□□ -1.4
VPS61YDR136C SEC28P40509 296 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C MAF1P41910 395 aa6.31□□□□□ -1.4
VPS61YDR136C SET2P46995 733 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C ASN2P49090 572 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C PEX31P53203 462 aa6.31□□□□□ -1.4
VPS61YDR136C SQS1P53866 767 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C NOP13P53883 403 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
VPS61YDR136C ADE12P80210 433 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C CWC21Q03375 135 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C SNU56Q03782 492 aaKnown RBP6.31□□□□□ -1.4
VPS61YDR136C JIP5Q06214 492 aaPredicted RBP6.31□□□□□ -1.4
VPS61YDR136C ENT4Q07872 247 aa6.31□□□□□ -1.4
VPS61YDR136C YOL019WQ08157 551 aa6.31□□□□□ -1.4
VPS61YDR136C THI20Q08224 551 aa6.31□□□□□ -1.4
VPS61YDR136C LDB17Q12342 491 aa6.31□□□□□ -1.4
VPS61YDR136C SRF1Q12516 437 aa6.31□□□□□ -1.4
VPS61YDR136C YUR1P26725 428 aa6.3□□□□□ -1.4
VPS61YDR136C UTR2P32623 467 aa6.3□□□□□ -1.4
VPS61YDR136C AIM26P32858 118 aa6.3□□□□□ -1.4
VPS61YDR136C TIF3P34167 436 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C PPE1P38796 400 aa6.3□□□□□ -1.4
VPS61YDR136C NMD3P38861 518 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C UTP9P38882 575 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C NPT1P39683 429 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C YAT2P40017 923 aa6.3□□□□□ -1.4
VPS61YDR136C UBP7P40453 1071 aa6.3□□□□□ -1.4
VPS61YDR136C MNN11P46985 422 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C BNA3P47039 444 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C ARC35P53731 342 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C SLU7Q02775 382 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C YPL062WQ02781 134 aa6.3□□□□□ -1.4
VPS61YDR136C NAN1Q02931 896 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C DYN3Q04949 312 aa6.3□□□□□ -1.4
VPS61YDR136C GLO2Q05584 274 aa6.3□□□□□ -1.4
VPS61YDR136C YDL073WQ07454 984 aa6.3□□□□□ -1.4
VPS61YDR136C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
VPS61YDR136C SPE3Q12074 293 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C CFT2Q12102 859 aaPredicted RBP6.3□□□□□ -1.4
VPS61YDR136C MSH5Q12175 901 aa6.3□□□□□ -1.4
VPS61YDR136C IES3Q12345 250 aa6.3□□□□□ -1.4
VPS61YDR136C CMR1Q12510 522 aaKnown RBP6.3□□□□□ -1.4
VPS61YDR136C NHA1Q99271 985 aa6.3□□□□□ -1.4
VPS61YDR136C HAP4P14064 554 aa6.29□□□□□ -1.4
VPS61YDR136C PHO87P25360 923 aa6.29□□□□□ -1.4
VPS61YDR136C CSM1P25651 190 aa6.29□□□□□ -1.4
VPS61YDR136C KAR9P32526 644 aa6.29□□□□□ -1.4
VPS61YDR136C GDA1P32621 518 aa6.29□□□□□ -1.4
VPS61YDR136C TIM23P32897 222 aa6.29□□□□□ -1.4
VPS61YDR136C SRP101P32916 621 aa6.29□□□□□ -1.4
VPS61YDR136C KDX1P36005 433 aa6.29□□□□□ -1.4
VPS61YDR136C TBS1P38114 1094 aa6.29□□□□□ -1.4
VPS61YDR136C FLR1P38124 548 aa6.29□□□□□ -1.4
VPS61YDR136C BIT2P38346 545 aa6.29□□□□□ -1.4
VPS61YDR136C YHI9P38765 294 aa6.29□□□□□ -1.4
VPS61YDR136C PIK1P39104 1066 aa6.29□□□□□ -1.4
VPS61YDR136C MEF2P39677 819 aa6.29□□□□□ -1.4
VPS61YDR136C MGS1P40151 587 aa6.29□□□□□ -1.4
VPS61YDR136C AIM20P40451 204 aa6.29□□□□□ -1.4
VPS61YDR136C AIF1P52923 378 aa6.29□□□□□ -1.4
VPS61YDR136C GET1P53192 235 aa6.29□□□□□ -1.4
VPS61YDR136C YGR127WP53275 312 aa6.29□□□□□ -1.4
VPS61YDR136C ALG11P53954 548 aaKnown RBP6.29□□□□□ -1.4
VPS61YDR136C RAD30Q04049 632 aa6.29□□□□□ -1.4
VPS61YDR136C DOT1Q04089 582 aaKnown RBP6.29□□□□□ -1.4
VPS61YDR136C RRP15Q06511 250 aaPredicted RBP6.29□□□□□ -1.4
VPS61YDR136C CDD1Q06549 142 aa6.29□□□□□ -1.4
VPS61YDR136C HDA3Q06623 655 aa6.29□□□□□ -1.4
VPS61YDR136C CDA1Q06702 301 aa6.29□□□□□ -1.4
VPS61YDR136C SLD7Q08457 257 aa6.29□□□□□ -1.4
VPS61YDR136C MET7Q08645 548 aa6.29□□□□□ -1.4
VPS61YDR136C CHS5Q12114 671 aaKnown RBP6.29□□□□□ -1.4
VPS61YDR136C YOR342CQ12182 319 aa6.29□□□□□ -1.4
VPS61YDR136C ATG34Q12292 412 aa6.29□□□□□ -1.4
VPS61YDR136C YDR461C-AQ2V2P7 80 aa6.29□□□□□ -1.4
VPS61YDR136C TSC13Q99190 310 aa6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms