RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W MET28P40573 187 aa5.87□□□□□ -1.47
VMS1YDR049W MSS2P40990 351 aa5.87□□□□□ -1.47
VMS1YDR049W CAK1P43568 368 aaPredicted RBP5.87□□□□□ -1.47
VMS1YDR049W YJR124CP47159 448 aa5.87□□□□□ -1.47
VMS1YDR049W NOP15P53927 220 aaPredicted RBP5.87□□□□□ -1.47
VMS1YDR049W FRK1Q03002 865 aaPredicted RBP5.87□□□□□ -1.47
VMS1YDR049W VPS20Q04272 221 aa5.87□□□□□ -1.47
VMS1YDR049W HBT1Q07653 1046 aaKnown RBP5.87□□□□□ -1.47
VMS1YDR049W TY1A-GR1Q12085 440 aa5.87□□□□□ -1.47
VMS1YDR049W GIS3Q12418 502 aa5.87□□□□□ -1.47
VMS1YDR049W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.87□□□□□ -1.47
VMS1YDR049W TY1A-OLQ92392 440 aaKnown RBP5.87□□□□□ -1.47
VMS1YDR049W CBP2P03874 630 aaPredicted RBP5.86□□□□□ -1.47
VMS1YDR049W GCD2P12754 651 aaPredicted RBP5.86□□□□□ -1.47
VMS1YDR049W PTR2P32901 601 aa5.86□□□□□ -1.47
VMS1YDR049W MRPL37P36532 105 aa5.86□□□□□ -1.47
VMS1YDR049W RGI2P40188 164 aa5.86□□□□□ -1.47
VMS1YDR049W RLP7P40693 322 aaKnown RBP5.86□□□□□ -1.47
VMS1YDR049W MSB3P48566 633 aaPredicted RBP5.86□□□□□ -1.47
VMS1YDR049W YGR111WP53265 400 aa5.86□□□□□ -1.47
VMS1YDR049W PGA2P53903 129 aa5.86□□□□□ -1.47
VMS1YDR049W AQR1P53943 586 aa5.86□□□□□ -1.47
VMS1YDR049W REG1Q00816 1014 aa5.86□□□□□ -1.47
VMS1YDR049W RCO1Q04779 684 aa5.86□□□□□ -1.47
VMS1YDR049W RPN7Q06103 429 aaKnown RBP5.86□□□□□ -1.47
VMS1YDR049W ULA1Q12059 462 aa5.86□□□□□ -1.47
VMS1YDR049W DIN7Q12086 430 aa5.86□□□□□ -1.47
VMS1YDR049W RTC1Q08281 1341 aa5.86□□□□□ -1.47
VMS1YDR049W RPS31P05759 152 aaKnown RBP5.85□□□□□ -1.47
VMS1YDR049W FBP1P09201 348 aa5.85□□□□□ -1.47
VMS1YDR049W RPL11AP0C0W9 174 aaKnown RBP5.85□□□□□ -1.47
VMS1YDR049W CAF20P12962 161 aaKnown RBP5.85□□□□□ -1.47
VMS1YDR049W ERG6P25087 383 aaKnown RBP5.85□□□□□ -1.47
VMS1YDR049W GBP2P25555 427 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
VMS1YDR049W SUA5P32579 426 aa5.85□□□□□ -1.47
VMS1YDR049W SEF1P34228 1148 aa5.85□□□□□ -1.47
VMS1YDR049W YKR015CP36111 568 aa5.85□□□□□ -1.47
VMS1YDR049W CST26P38226 397 aa5.85□□□□□ -1.47
VMS1YDR049W VID24P38263 362 aa5.85□□□□□ -1.47
VMS1YDR049W GDT1P38301 280 aaPredicted RBP5.85□□□□□ -1.47
VMS1YDR049W FSH1P38777 243 aaKnown RBP5.85□□□□□ -1.47
VMS1YDR049W BZZ1P38822 633 aa5.85□□□□□ -1.47
VMS1YDR049W ASG1P40467 964 aa5.85□□□□□ -1.47
VMS1YDR049W BST1P43571 1029 aa5.85□□□□□ -1.47
VMS1YDR049W ATC1Q04005 294 aa5.85□□□□□ -1.47
VMS1YDR049W YLR297WQ05899 129 aa5.85□□□□□ -1.47
VMS1YDR049W BRX1Q08235 291 aaKnown RBP5.85□□□□□ -1.47
VMS1YDR049W RSB1Q08417 382 aa5.85□□□□□ -1.47
VMS1YDR049W DCI1Q08558 271 aa5.85□□□□□ -1.47
VMS1YDR049W RPL11BQ3E757 174 aaPredicted RBP5.85□□□□□ -1.47
VMS1YDR049W YML133CQ03099 1374 aa5.85□□□□□ -1.47
VMS1YDR049W YLL066CQ99208 1374 aa5.85□□□□□ -1.47
VMS1YDR049W DNA2P38859 1522 aa5.85□□□□□ -1.47
VMS1YDR049W PRP2P20095 876 aaPredicted RBP5.85□□□□□ -1.47
VMS1YDR049W CDC15P27636 974 aa5.85□□□□□ -1.47
VMS1YDR049W RPC82P32349 654 aa5.85□□□□□ -1.47
VMS1YDR049W ERG1P32476 496 aaKnown RBP5.85□□□□□ -1.47
VMS1YDR049W TSL1P38427 1098 aaKnown RBP5.85□□□□□ -1.47
VMS1YDR049W MNN9P39107 395 aaKnown RBP5.85□□□□□ -1.47
VMS1YDR049W RTR1P40084 226 aaPredicted RBP5.85□□□□□ -1.47
VMS1YDR049W RRT14P40470 206 aa5.85□□□□□ -1.47
VMS1YDR049W INP51P40559 946 aaKnown RBP5.85□□□□□ -1.47
VMS1YDR049W YDL183CP48569 320 aa5.85□□□□□ -1.47
VMS1YDR049W UBP15P50101 1230 aa5.85□□□□□ -1.47
VMS1YDR049W GLO1P50107 326 aa5.85□□□□□ -1.47
VMS1YDR049W MEC3Q02574 474 aa5.85□□□□□ -1.47
VMS1YDR049W RRP17Q04031 235 aaPredicted RBP5.85□□□□□ -1.47
VMS1YDR049W TRI1Q05024 226 aa5.85□□□□□ -1.47
VMS1YDR049W GLO4Q12320 285 aa5.85□□□□□ -1.47
VMS1YDR049W TFB5Q3E7C1 72 aaPredicted RBP5.85□□□□□ -1.47
VMS1YDR049W YBR182C-AQ8TGU6 64 aa5.85□□□□□ -1.47
VMS1YDR049W HXK2P04807 486 aaKnown RBP5.84□□□□□ -1.47
VMS1YDR049W PMA2P19657 947 aa5.84□□□□□ -1.47
VMS1YDR049W DAL81P21657 970 aa5.84□□□□□ -1.47
VMS1YDR049W MF(ALPHA)2P32435 120 aa5.84□□□□□ -1.47
VMS1YDR049W MAK5P38112 773 aaPredicted RBP5.84□□□□□ -1.47
VMS1YDR049W REG2P38232 338 aa5.84□□□□□ -1.47
VMS1YDR049W DLD3P39976 496 aaKnown RBP5.84□□□□□ -1.47
VMS1YDR049W SLS1P42900 643 aa5.84□□□□□ -1.47
VMS1YDR049W HSH155P49955 971 aaKnown RBP5.84□□□□□ -1.47
VMS1YDR049W MNT2P53059 558 aa5.84□□□□□ -1.47
VMS1YDR049W YNR071CP53757 342 aa5.84□□□□□ -1.47
VMS1YDR049W CUS1Q02554 436 aaPredicted RBP5.84□□□□□ -1.47
VMS1YDR049W YMR210WQ03649 449 aa5.84□□□□□ -1.47
VMS1YDR049W SOV1Q04748 898 aa5.84□□□□□ -1.47
VMS1YDR049W DFG5Q05031 458 aa5.84□□□□□ -1.47
VMS1YDR049W YLR173WQ06247 608 aa5.84□□□□□ -1.47
VMS1YDR049W VAC14Q06708 880 aa5.84□□□□□ -1.47
VMS1YDR049W AAD4Q07747 329 aa5.84□□□□□ -1.47
VMS1YDR049W RAD61Q99359 647 aa5.84□□□□□ -1.47
VMS1YDR049W STE2D6VTK4 431 aa5.83□□□□□ -1.48
VMS1YDR049W CDC36P06100 191 aaPredicted RBP5.83□□□□□ -1.48
VMS1YDR049W GPA1P08539 472 aa5.83□□□□□ -1.48
VMS1YDR049W CKA2P19454 339 aa5.83□□□□□ -1.48
VMS1YDR049W AFG1P32317 509 aa5.83□□□□□ -1.48
VMS1YDR049W MIA40P36046 403 aa5.83□□□□□ -1.48
VMS1YDR049W SSZ1P38788 538 aaKnown RBP5.83□□□□□ -1.48
VMS1YDR049W TMN3P40071 706 aa5.83□□□□□ -1.48
VMS1YDR049W AIR1P40507 360 aaKnown RBP5.83□□□□□ -1.48
VMS1YDR049W YFR018CP43599 363 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms