RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 PUS3Q9BZE2 481 aaKnown RBP7.76□□□□□ -1.17
RTTN-215ENST00000639487 TCHHQ07283 1943 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 F6X3S4 739 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 CETPP11597 493 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 HCLS1P14317 486 aaPredicted RBP7.76□□□□□ -1.17
RTTN-215ENST00000639487 PHKA1P46020 1223 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 C1QTNF8P60827 252 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 MAP2K1Q02750 393 aaPredicted RBP7.76□□□□□ -1.17
RTTN-215ENST00000639487 PCBP1Q15365 356 aaKnown RBP eCLIP7.76□□□□□ -1.17
RTTN-215ENST00000639487 AOC3Q16853 763 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 FAM110CQ1W6H9 321 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 DNERQ8NFT8 737 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 SMARCC2Q8TAQ2 1214 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 SOCS4Q8WXH5 440 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 ESYT1Q9BSJ8 1104 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 KATNBL1Q9H079 304 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 MKNK2Q9HBH9 465 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 CNOT7Q9UIV1 285 aaKnown RBP7.76□□□□□ -1.17
RTTN-215ENST00000639487 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.76□□□□□ -1.17
RTTN-215ENST00000639487 ABCB11O95342 1321 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 PALM3A6NDB9 673 aaPredicted RBP7.75□□□□□ -1.17
RTTN-215ENST00000639487 CIITAP33076 1130 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 GRB14Q14449 540 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 CFAP100Q494V2 611 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 CST9Q5W186 159 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 MTCL1Q9Y4B5 1905 aaKnown RBP7.75□□□□□ -1.17
RTTN-215ENST00000639487 SLC15A5A6NIM6 579 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 MYO1BO43795 1136 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 STRNO43815 780 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 EIF2S2P20042 333 aaKnown RBP7.75□□□□□ -1.17
RTTN-215ENST00000639487 NUTM1Q86Y26 1132 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 ZNF526Q8TF50 670 aaPredicted RBP7.75□□□□□ -1.17
RTTN-215ENST00000639487 PRO3102Q9H379 93 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 EPB41L4AQ9HCS5 686 aaPredicted RBP7.75□□□□□ -1.17
RTTN-215ENST00000639487 ASNSP08243 561 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 PAX3P23760 479 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 GPATCH4Q5T3I0 446 aaKnown RBP7.75□□□□□ -1.17
RTTN-215ENST00000639487 CTR9Q6PD62 1173 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 CATSPERGQ6ZRH7 1159 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 POTEDQ86YR6 584 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 SIAH1Q8IUQ4 282 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 SYTL4Q96C24 671 aaPredicted RBP7.75□□□□□ -1.17
RTTN-215ENST00000639487 IWS1Q96ST2 819 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 MROH8Q9H579 483 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 PNMA3Q9UL41 463 aa7.75□□□□□ -1.17
RTTN-215ENST00000639487 KPNA6O60684 536 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 IGHDP01880 384 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 BMP8BP34820 402 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 ARHGEF6Q15052 776 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 VPS53Q5VIR6 699 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 TTLL5Q6EMB2 1281 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 KCNV1Q6PIU1 500 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 MAFGO15525 162 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 PARNO95453 639 aaKnown RBP7.74□□□□□ -1.17
RTTN-215ENST00000639487 RASSF7Q02833 373 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 POU5F1BQ06416 359 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 SCARF1Q14162 830 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 FAM26DQ5JW98 314 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 FAM182BQ5T319 152 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 TXNRD3Q86VQ6 643 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 MICALL2Q8IY33 904 aa7.74□□□□□ -1.17
RTTN-215ENST00000639487 HYIQ5T013 277 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 PLCD3Q8N3E9 789 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 KANSL2Q9H9L4 492 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 CNNM1Q9NRU3 951 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 ATF5Q9Y2D1 282 aaPredicted RBP7.73□□□□□ -1.17
RTTN-215ENST00000639487 ATP5J2-PTCD1G3V325 749 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 ABCD1P33897 745 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 ANKRD1Q15327 319 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 RGMBQ6NW40 437 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 DBNDD2Q9BQY9 259 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 PLCD4Q9BRC7 762 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 FBXO40Q9UH90 709 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 TBX3O15119 743 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 SOX12O15370 315 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 LYPLA2O95372 231 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 PTPRAP18433 802 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 RASA1P20936 1047 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 GNAQP50148 359 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 TTC39AQ5SRH9 613 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.73□□□□□ -1.17
RTTN-215ENST00000639487 TRAIPQ9BWF2 469 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 RNF181Q9P0P0 153 aa7.73□□□□□ -1.17
RTTN-215ENST00000639487 IGKV6D-21A0A0A0MT36 114 aa7.72□□□□□ -1.17
RTTN-215ENST00000639487 MAGEB6P1A0A0J9YX57 407 aa7.72□□□□□ -1.17
RTTN-215ENST00000639487 SLC3A2P08195 630 aaKnown RBP7.72□□□□□ -1.17
RTTN-215ENST00000639487 RTL5Q5HYW3 569 aaPredicted RBP7.72□□□□□ -1.17
RTTN-215ENST00000639487 C20orf194Q5TEA3 1177 aa7.72□□□□□ -1.17
RTTN-215ENST00000639487 C22orf23Q9BZE7 217 aa7.72□□□□□ -1.17
RTTN-215ENST00000639487 IQSEC3Q9UPP2 1182 aaPredicted RBP7.72□□□□□ -1.17
RTTN-215ENST00000639487 ATG7O95352 703 aa7.72□□□□□ -1.17
RTTN-215ENST00000639487 IFNLR1Q8IU57 520 aaPredicted RBP7.72□□□□□ -1.17
RTTN-215ENST00000639487 ITPRIPQ8IWB1 547 aa7.72□□□□□ -1.17
RTTN-215ENST00000639487 FAXDC2Q96IV6 333 aa7.72□□□□□ -1.17
RTTN-215ENST00000639487 DUSP9Q99956 384 aaKnown RBP7.72□□□□□ -1.17
RTTN-215ENST00000639487 PHF14O94880 888 aa7.71□□□□□ -1.17
RTTN-215ENST00000639487 POU3F3P20264 500 aaPredicted RBP7.71□□□□□ -1.17
RTTN-215ENST00000639487 IGDCC4Q8TDY8 1250 aa7.71□□□□□ -1.17
RTTN-215ENST00000639487 GTPBP4Q9BZE4 634 aaKnown RBP7.71□□□□□ -1.17
RTTN-215ENST00000639487 PRDM16Q9HAZ2 1276 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms