RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 FAM87AP0C7U9 286 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 EIF6P56537 245 aaKnown RBP4.37□□□□□ -1.71
GYPB-216ENST00000638448 BMS1Q14692 1282 aaKnown RBP4.37□□□□□ -1.71
GYPB-216ENST00000638448 LRRFIP1Q32MZ4 808 aaKnown RBP4.37□□□□□ -1.71
GYPB-216ENST00000638448 SEZ6Q53EL9 994 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 OGFOD3Q6PK18 319 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 BNC2Q6ZN30 1099 aaPredicted RBP4.37□□□□□ -1.71
GYPB-216ENST00000638448 JAZF1Q86VZ6 243 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 TAB3Q8N5C8 712 aaPredicted RBP4.37□□□□□ -1.71
GYPB-216ENST00000638448 FAM181AQ8N9Y4 354 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 CPLX3Q8WVH0 158 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 ZNF669Q96BR6 464 aaPredicted RBP4.37□□□□□ -1.71
GYPB-216ENST00000638448 DEPDC7Q96QD5 511 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 ATXN3LQ9H3M9 355 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 DISC1Q9NRI5 854 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 U3KQE9 123 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 F6X3S4 739 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 CLSTN1O94985 981 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 NEFMP07197 916 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 HCLS1P14317 486 aaPredicted RBP4.36□□□□□ -1.71
GYPB-216ENST00000638448 ITGB5P18084 799 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 TTLL4Q14679 1199 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 SMYD4Q8IYR2 804 aaPredicted RBP4.36□□□□□ -1.71
GYPB-216ENST00000638448 PLD6Q8N2A8 252 aaKnown RBP4.36□□□□□ -1.71
GYPB-216ENST00000638448 AGBL5Q8NDL9 886 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 BCL7CQ8WUZ0 217 aaPredicted RBP4.36□□□□□ -1.71
GYPB-216ENST00000638448 KCNB2Q92953 911 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 FERD3LQ96RJ6 166 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 CRBNQ96SW2 442 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 SNTG2Q9NY99 539 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 PPT2Q9UMR5 302 aa4.36□□□□□ -1.71
GYPB-216ENST00000638448 R3HCC1Q9Y3T6 440 aaKnown RBP4.36□□□□□ -1.71
GYPB-216ENST00000638448 LEFTY1O75610 366 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 SLFN14P0C7P3 912 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 CDK11BP21127 795 aaKnown RBP4.35□□□□□ -1.71
GYPB-216ENST00000638448 RASGRF1Q13972 1273 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 DDR2Q16832 855 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 PLEKHG4Q58EX7 1191 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 RASIP1Q5U651 963 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 ISL2Q96A47 359 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 ANAPC16Q96DE5 110 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 SRPK1Q96SB4 655 aaKnown RBP4.35□□□□□ -1.71
GYPB-216ENST00000638448 TM9SF2Q99805 663 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 ACTR10Q9NZ32 417 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 SLC5A6Q9Y289 635 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 PCDHB5Q9Y5E4 795 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 SLC12A7Q9Y666 1083 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 SNCAIPQ9Y6H5 919 aa4.35□□□□□ -1.71
GYPB-216ENST00000638448 SMAD7O15105 426 aaKnown RBP4.34□□□□□ -1.71
GYPB-216ENST00000638448 RNGTTO60942 597 aaKnown RBP4.34□□□□□ -1.71
GYPB-216ENST00000638448 SEPT6Q14141 434 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 PLCL1Q15111 1095 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 FXNQ16595 210 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 CYP27C1Q4G0S4 372 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 MAP1SQ66K74 1059 aaPredicted RBP4.34□□□□□ -1.71
GYPB-216ENST00000638448 SPRED2Q7Z698 418 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 LSRQ86X29 649 aaPredicted RBP4.34□□□□□ -1.71
GYPB-216ENST00000638448 JMYQ8N9B5 988 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 FBXO27Q8NI29 283 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 GPBAR1Q8TDU6 330 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 HNRNPLLQ8WVV9 542 aaKnown RBP4.34□□□□□ -1.71
GYPB-216ENST00000638448 BRMS1Q9HCU9 246 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 PRKAB1Q9Y478 270 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 MRVI1Q9Y6F6 885 aa4.34□□□□□ -1.71
GYPB-216ENST00000638448 MRPL42Q9Y6G3 142 aaKnown RBP4.34□□□□□ -1.71
GYPB-216ENST00000638448 SBNO2Q9Y2G9 1366 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 GFRA2O00451 464 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 PAPLNO95428 1278 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 YBX3P16989 372 aaKnown RBP eCLIP4.33□□□□□ -1.726e-7■■■□□ 14.8
GYPB-216ENST00000638448 CD96P40200 585 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 BNIP3Q12983 259 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 MLECQ14165 292 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 TCEAL1Q15170 157 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 ZC3H12AQ5D1E8 599 aaKnown RBP4.33□□□□□ -1.72
GYPB-216ENST00000638448 ARSHQ5FYA8 562 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 INTS3Q68E01 1043 aaKnown RBP4.33□□□□□ -1.72
GYPB-216ENST00000638448 OGFOD2Q6N063 350 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 MPRIPQ6WCQ1 1025 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 STK11IPQ8N1F8 1099 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 SYNPOQ8N3V7 929 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 TOP6BLQ8N6T0 577 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 FAM169BQ8N8A8 192 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 ST13P5Q8NFI4 369 aaPredicted RBP4.33□□□□□ -1.72
GYPB-216ENST00000638448 NETO1Q8TDF5 533 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 ACSBG1Q96GR2 724 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 RNPC3Q96LT9 517 aaKnown RBP4.33□□□□□ -1.72
GYPB-216ENST00000638448 DUSP23Q9BVJ7 150 aa4.33□□□□□ -1.72
GYPB-216ENST00000638448 PPM1GO15355 546 aaPredicted RBP4.32□□□□□ -1.72
GYPB-216ENST00000638448 TLR3O15455 904 aaKnown RBP4.32□□□□□ -1.72
GYPB-216ENST00000638448 PDPK1O15530 556 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 MCM4P33991 863 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 ERVK-24P63145 666 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 CLCQ05315 142 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 ZNF792Q3KQV3 632 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 TAF7LQ5H9L4 462 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 TMEM201Q5SNT2 666 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 CCDC81Q6ZN84 652 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 UBE3DQ7Z6J8 389 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 ZCRB1Q8TBF4 217 aaKnown RBP4.32□□□□□ -1.72
GYPB-216ENST00000638448 GRIN3AQ8TCU5 1115 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms