RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 CDC45O75419 566 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 CDC27P30260 824 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 RAP1GAPP47736 663 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 PCDH1Q08174 1060 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 SQSTM1Q13501 440 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 SEPT6Q14141 434 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 FILIP1Q7Z7B0 1213 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 RPUSD2Q8IZ73 545 aaKnown RBP5.33□□□□□ -1.56
CHD2-228ENST00000637613 SHISA5Q8N114 240 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 ASAP3Q8TDY4 903 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 APPBP2Q92624 585 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 ZNF669Q96BR6 464 aaPredicted RBP5.33□□□□□ -1.56
CHD2-228ENST00000637613 FERD3LQ96RJ6 166 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 SPC25Q9HBM1 224 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 POLR3KQ9Y2Y1 108 aaPredicted RBP5.33□□□□□ -1.56
CHD2-228ENST00000637613 ESYT3A0FGR9 886 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 MEIS3P2A8K0S8 358 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 IBSPP21815 317 aaPredicted RBP5.32□□□□□ -1.56
CHD2-228ENST00000637613 CHMP4BP1P59074 171 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 RPL6Q02878 288 aaKnown RBP5.32□□□□□ -1.56
CHD2-228ENST00000637613 PTPN11Q06124 597 aaPredicted RBP5.32□□□□□ -1.56
CHD2-228ENST00000637613 FXNQ16595 210 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 LLGL2Q6P1M3 1020 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 HOMER1Q86YM7 354 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 SULF2Q8IWU5 870 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 LRRC56Q8IYG6 542 aaPredicted RBP5.32□□□□□ -1.56
CHD2-228ENST00000637613 GRIN3AQ8TCU5 1115 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 JARID2Q92833 1246 aaPredicted RBP5.32□□□□□ -1.56
CHD2-228ENST00000637613 CRBNQ96SW2 442 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 METTL14Q9HCE5 456 aaKnown RBP5.32□□□□□ -1.56
CHD2-228ENST00000637613 CWC22Q9HCG8 908 aaKnown RBP5.32□□□□□ -1.56
CHD2-228ENST00000637613 LMCD1Q9NZU5 365 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 MAPK8IP1Q9UQF2 711 aa5.32□□□□□ -1.56
CHD2-228ENST00000637613 MARCH6O60337 910 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 SMNDC1O75940 238 aaKnown RBP eCLIP5.31□□□□□ -1.56
CHD2-228ENST00000637613 TRIM37O94972 964 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 VIL1P09327 827 aaKnown RBP5.31□□□□□ -1.56
CHD2-228ENST00000637613 ESRRAP11474 423 aaPredicted RBP5.31□□□□□ -1.56
CHD2-228ENST00000637613 RXRBP28702 533 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 MCM4P33991 863 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 ZNF157P51786 506 aaPredicted RBP5.31□□□□□ -1.56
CHD2-228ENST00000637613 GYS2P54840 703 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 ANAPC15P60006 121 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 AMPD3Q01432 767 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 IFRD2Q12894 506 aaPredicted RBP5.31□□□□□ -1.56
CHD2-228ENST00000637613 C2orf27AQ580R0 203 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 GK5Q6ZS86 529 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 C16orf86Q6ZW13 317 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 TAB3Q8N5C8 712 aaPredicted RBP5.31□□□□□ -1.56
CHD2-228ENST00000637613 THAP3Q8WTV1 239 aaPredicted RBP5.31□□□□□ -1.56
CHD2-228ENST00000637613 EMILIN2Q9BXX0 1053 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 LACRTQ9GZZ8 138 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 ST7Q9NRC1 585 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 SLC5A6Q9Y289 635 aa5.31□□□□□ -1.56
CHD2-228ENST00000637613 FAM95CA0A1B0GW59 222 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 MEGF11A6BM72 1044 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 CCDC85CA6NKD9 419 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 GFRA2O00451 464 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 GJB6O95452 261 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 TSPAN15O95858 294 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 ZSCAN22P10073 491 aaPredicted RBP5.3□□□□□ -1.56
CHD2-228ENST00000637613 CDC25BP30305 580 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 PAOXQ6QHF9 649 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 ZAR1Q86SH2 424 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 ST13P5Q8NFI4 369 aaPredicted RBP5.3□□□□□ -1.56
CHD2-228ENST00000637613 BCL7CQ8WUZ0 217 aaPredicted RBP5.3□□□□□ -1.56
CHD2-228ENST00000637613 KLHDC7BQ96G42 594 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 FEZ1Q99689 392 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 RUSC1Q9BVN2 902 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 ZC3H7BQ9UGR2 993 aaKnown RBP5.3□□□□□ -1.56
CHD2-228ENST00000637613 PCDHB14Q9Y5E9 798 aa5.3□□□□□ -1.56
CHD2-228ENST00000637613 A0A1W2PQH9 124 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 UPK3BL1B0FP48 263 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 UPK3BL2E5RIL1 263 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 PPP1R12AO14974 1030 aaPredicted RBP5.29□□□□□ -1.56
CHD2-228ENST00000637613 PTPRAP18433 802 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 LMNB1P20700 586 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 ADMP35318 185 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 MASP1P48740 699 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 NFKBIBQ15653 356 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 CEP135Q66GS9 1140 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 MPRIPQ6WCQ1 1025 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 WFDC3Q8IUB2 231 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 SYNPOQ8N3V7 929 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 STAG1Q8WVM7 1258 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 TM9SF2Q99805 663 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 CHMP4AQ9BY43 222 aa5.29□□□□□ -1.56
CHD2-228ENST00000637613 SLKQ9H2G2 1235 aaPredicted RBP5.29□□□□□ -1.56
CHD2-228ENST00000637613 SOX17Q9H6I2 414 aaPredicted RBP5.29□□□□□ -1.56
CHD2-228ENST00000637613 BPNT1O95861 308 aa5.28□□□□□ -1.56
CHD2-228ENST00000637613 EPHA1P21709 976 aa5.28□□□□□ -1.56
CHD2-228ENST00000637613 AP3B2Q13367 1082 aa5.28□□□□□ -1.56
CHD2-228ENST00000637613 LRRFIP1Q32MZ4 808 aaKnown RBP5.28□□□□□ -1.56
CHD2-228ENST00000637613 TKFCQ3LXA3 575 aa5.28□□□□□ -1.56
CHD2-228ENST00000637613 FBXW10Q5XX13 1052 aa5.28□□□□□ -1.56
CHD2-228ENST00000637613 DIEXFQ68CQ4 756 aaKnown RBP5.28□□□□□ -1.56
CHD2-228ENST00000637613 INTS3Q68E01 1043 aaKnown RBP5.28□□□□□ -1.56
CHD2-228ENST00000637613 MRM1Q6IN84 353 aaKnown RBP5.28□□□□□ -1.56
CHD2-228ENST00000637613 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.28□□□□□ -1.56
CHD2-228ENST00000637613 RUFY4Q6ZNE9 571 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms