RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 SLFNL1Q499Z3 407 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 FAM117BQ6P1L5 589 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 LRRC43Q8N309 656 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 PRKAB1Q9Y478 270 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 TIPRLO75663 272 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CETN2P41208 172 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CSE1LP55060 971 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 UBASH3AP57075 661 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 UBE4AQ14139 1066 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CRYMQ14894 314 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 TNIP1Q15025 636 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 MAPRE1Q15691 268 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 NEK5Q6P3R8 708 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 GATAD2AQ86YP4 633 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC144CPQ8IYA2 1237 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CTAGE1Q96RT6 745 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 C2orf49Q9BVC5 232 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 TSGA10Q9BZW7 698 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 NRDE2Q9H7Z3 1164 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CNNM2Q9H8M5 875 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 NLRP2Q9NX02 1062 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 SLC4A7Q9Y6M7 1214 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 DIP2AQ14689 1571 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 SPATA31D1Q6ZQQ2 1576 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 ANKRD33BA6NCL7 494 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 hCG_1984214I3L0E3 225 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 KIF2AO00139 706 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 PFDN1O60925 122 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 INMTO95050 263 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 IL33O95760 270 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 RPL17P18621 184 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 PLIN5Q00G26 463 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 AIMP1Q12904 312 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 USP4Q13107 963 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 POTEEQ6S8J3 1075 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 LUZP1Q86V48 1076 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 ITPRIPQ8IWB1 547 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC150Q8NCX0 1101 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 FAM81AQ8TBF8 368 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 APPBP2Q92624 585 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 EZH1Q92800 747 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 GFM2Q969S9 779 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 PBXIP1Q96AQ6 731 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 EIF2AK1Q9BQI3 630 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 FSD1Q9BTV5 496 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CARD11Q9BXL7 1154 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 API5Q9BZZ5 524 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 ACAD8Q9UKU7 415 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 PTPRKQ15262 1439 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 FAM177BA6PVY3 158 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 XPOTO43592 962 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 GYS1P13807 737 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CASP2P42575 452 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 HSD17B7P56937 341 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 MAP3K7CLP57077 242 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 TAGLNQ01995 201 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 POSTNQ15063 836 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 TRMT2AQ8IZ69 625 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CPXCR1Q8N123 301 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 C3orf20Q8ND61 904 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 DTNBP1Q96EV8 351 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC113Q9H0I3 377 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 KIF9Q9HAQ2 790 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 SH3GLB2Q9NR46 395 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 RGL1Q9NZL6 768 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 ANKIB1Q9P2G1 1089 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 TMEM98Q9Y2Y6 226 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 AFG3L2Q9Y4W6 797 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 PTPRTO14522 1441 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 ZNF521Q96K83 1311 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 SYNDIG1LA6NDD5 238 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 C2orf81A6NN90 581 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 BPNT1O95861 308 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CDC27P30260 824 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 MYBPC3Q14896 1274 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC122Q5T0U0 273 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 SPATS2Q86XZ4 545 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 SIX5Q8N196 739 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 NLGN1Q8N2Q7 840 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 GALNT6Q8NCL4 622 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 BICD2Q8TD16 824 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 UROC1Q96N76 676 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 TRIM5Q9C035 493 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 RRP7BPQ9NSQ0 103 aa4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 XPO7Q9UIA9 1087 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-220ENST00000628915 CD109Q6YHK3 1445 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 CFAP65Q6ZU64 1925 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 TADA3O75528 432 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 CHMP4BP1P59074 171 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 LBRQ14739 615 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 ASIC2Q16515 512 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 RILPL1Q5EBL4 403 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 ARHGAP22Q7Z5H3 698 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 PPFIBP1Q86W92 1011 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 SYCP3Q8IZU3 236 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 GCC1Q96CN9 775 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 TMEM87BQ96K49 555 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 TTC14Q96N46 770 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 TSG101Q99816 390 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms