RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FANCCQ00597 558 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 NTRK3Q16288 839 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 WWC2Q6AWC2 1192 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 CC2D2BQ6DHV5 1058 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 SLC4A9Q96Q91 983 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 MAP3K14Q99558 947 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 BAG1Q99933 345 aaPredicted RBP14.1□□□□□ -0.15
LITAF-221ENST00000622633 EPC1Q9H2F5 836 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 LY9Q9HBG7 655 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 SOS2Q07890 1332 aaPredicted RBP14.1□□□□□ -0.15
LITAF-221ENST00000622633 CTDSPL2Q05D32 466 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 DDR1Q08345 913 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 PNOCQ13519 176 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 TRIM74Q86UV6 250 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 TRIM73Q86UV7 250 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 TMEM87BQ96K49 555 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 HPSEQ9Y251 543 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 PPP6R2O75170 966 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 SFPQP23246 707 aaKnown RBP eCLIP14.09□□□□□ -0.15
LITAF-221ENST00000622633 RPS6KA3P51812 740 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 CCDC150Q8NCX0 1101 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 ARMC2Q8NEN0 867 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.09□□□□□ -0.15
LITAF-221ENST00000622633 SLC26A6Q9BXS9 759 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 HSD3B7Q9H2F3 369 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 ZSWIM5Q9P217 1185 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 TACC3Q9Y6A5 838 aa14.09□□□□□ -0.15
LITAF-221ENST00000622633 EXOC5O00471 708 aa14.08□□□□□ -0.15
LITAF-221ENST00000622633 IFIT3O14879 490 aaKnown RBP14.08□□□□□ -0.15
LITAF-221ENST00000622633 UQCRFS1P1P0C7P4 283 aa14.08□□□□□ -0.15
LITAF-221ENST00000622633 CYP19A1P11511 503 aaPredicted RBP14.08□□□□□ -0.15
LITAF-221ENST00000622633 TRIM29Q14134 588 aa14.08□□□□□ -0.15
LITAF-221ENST00000622633 ARMC3Q5W041 872 aa14.08□□□□□ -0.15
LITAF-221ENST00000622633 MAGEB6Q8N7X4 407 aa14.08□□□□□ -0.15
LITAF-221ENST00000622633 SLAIN2Q9P270 581 aa14.08□□□□□ -0.15
LITAF-221ENST00000622633 TUBE1Q9UJT0 475 aa14.08□□□□□ -0.15
LITAF-221ENST00000622633 ZBTB1Q9Y2K1 713 aa14.08□□□□□ -0.15
LITAF-221ENST00000622633 MAP2K7O14733 419 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 PDE8AO60658 829 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 MRPL12P52815 198 aaKnown RBP14.08□□□□□ -0.16
LITAF-221ENST00000622633 LONRF3Q496Y0 759 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 RESP18Q5W5W9 173 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 IFNL3Q8IZI9 196 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 MICAL1Q8TDZ2 1067 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 DPF2Q92785 391 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 ZKSCAN4Q969J2 545 aaPredicted RBP14.08□□□□□ -0.16
LITAF-221ENST00000622633 PPP1R13BQ96KQ4 1090 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 ARMT1Q9H993 441 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 EPB41L4AQ9HCS5 686 aaPredicted RBP14.08□□□□□ -0.16
LITAF-221ENST00000622633 ARFGAP3Q9NP61 516 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 SPATS2LQ9NUQ6 558 aaKnown RBP14.08□□□□□ -0.16
LITAF-221ENST00000622633 UBN2Q6ZU65 1347 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 AKAP11Q9UKA4 1901 aa14.08□□□□□ -0.16
LITAF-221ENST00000622633 IKBKBO14920 756 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 MBD4O95243 580 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 NF2P35240 595 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 ICA1Q05084 483 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 PREPLQ4J6C6 727 aaPredicted RBP14.07□□□□□ -0.16
LITAF-221ENST00000622633 SPECC1Q5M775 1068 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 FOXP4Q8IVH2 680 aaPredicted RBP14.07□□□□□ -0.16
LITAF-221ENST00000622633 STK11IPQ8N1F8 1099 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 SPATA5Q8NB90 893 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 FAM107BQ9H098 131 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 NAPBQ9H115 298 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 SLC12A7Q9Y666 1083 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 ATRNO75882 1429 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 C4AP0C0L4 1744 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 C4BP0C0L5 1744 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 GUCY1A2P33402 732 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 SSRP1Q08945 709 aaKnown RBP14.07□□□□□ -0.16
LITAF-221ENST00000622633 PUM3Q15397 648 aaKnown RBP14.07□□□□□ -0.16
LITAF-221ENST00000622633 PTPN21Q16825 1174 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 SLC5A9Q2M3M2 681 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 SGMS1Q86VZ5 419 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 LPIN2Q92539 896 aa14.07□□□□□ -0.16
LITAF-221ENST00000622633 PRKAB2O43741 272 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 UBASH3AP57075 661 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 ALX1Q15699 326 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 RRP12Q5JTH9 1297 aaKnown RBP14.06□□□□□ -0.16
LITAF-221ENST00000622633 ARMCX6Q7L4S7 300 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 METTL16Q86W50 562 aaKnown RBP14.06□□□□□ -0.16
LITAF-221ENST00000622633 ZKSCAN3Q9BRR0 538 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 KCNH3Q9ULD8 1083 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 SHANK3Q9BYB0 1731 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 TOGARAM1Q9Y4F4 1720 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 EFCAB8A8MWE9 144 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 CUTAO60888 179 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 SERPINC1P01008 464 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 FGFR2P21802 821 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 SNX1Q13596 522 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 RASGRF1Q13972 1273 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 CCDC82Q8N4S0 544 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 CNNM3Q8NE01 707 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 ODF2LQ9ULJ1 636 aa14.06□□□□□ -0.16
LITAF-221ENST00000622633 FAM237AA0A1B0GTK4 181 aa14.05□□□□□ -0.16
LITAF-221ENST00000622633 BTBD18B2RXH4 712 aa14.05□□□□□ -0.16
LITAF-221ENST00000622633 FOXN1O15353 648 aa14.05□□□□□ -0.16
LITAF-221ENST00000622633 SNUPNO95149 360 aaKnown RBP14.05□□□□□ -0.16
LITAF-221ENST00000622633 MYL5Q02045 173 aa14.05□□□□□ -0.16
LITAF-221ENST00000622633 MAP3K12Q12852 859 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms