RNA–Protein interactions for RNA: ENST00000620962.1

ITM2C-210, Transcript of integral membrane protein 2C, humanhuman

BASIC

Gene ITM2C, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-210ENST00000620962 USP17L20D6RJB6 530 aa24.43■■□□□ 1.5
ITM2C-210ENST00000620962 SOX1O00570 391 aaPredicted RBP24.43■■□□□ 1.5
ITM2C-210ENST00000620962 USP14P54578 494 aa24.43■■□□□ 1.5
ITM2C-210ENST00000620962 CACNB2Q08289 660 aaPredicted RBP24.43■■□□□ 1.5
ITM2C-210ENST00000620962 USP17L24Q0WX57 530 aa24.43■■□□□ 1.5
ITM2C-210ENST00000620962 FEZ1Q99689 392 aa24.43■■□□□ 1.5
ITM2C-210ENST00000620962 KIAA1683Q9H0B3 1180 aa24.43■■□□□ 1.5
ITM2C-210ENST00000620962 ANTXR1Q9H6X2 564 aa24.43■■□□□ 1.5
ITM2C-210ENST00000620962 CERKLQ49MI3 558 aaPredicted RBP24.42■■□□□ 1.5
ITM2C-210ENST00000620962 LBX2Q6XYB7 198 aa24.42■■□□□ 1.5
ITM2C-210ENST00000620962 NDUFB9Q9Y6M9 179 aa24.42■■□□□ 1.5
ITM2C-210ENST00000620962 NAV1Q8NEY1 1877 aa24.42■■□□□ 1.5
ITM2C-210ENST00000620962 LAMA3Q16787 3333 aa24.41■■□□□ 1.5
ITM2C-210ENST00000620962 PFASO15067 1338 aa24.41■■□□□ 1.5
ITM2C-210ENST00000620962 FRMPD3Q5JV73 1810 aa24.41■■□□□ 1.5
ITM2C-210ENST00000620962 CNMDO75829 334 aa24.41■■□□□ 1.5
ITM2C-210ENST00000620962 CCNA1P78396 465 aa24.41■■□□□ 1.5
ITM2C-210ENST00000620962 RAB3GAP1Q15042 981 aa24.41■■□□□ 1.5
ITM2C-210ENST00000620962 CCL14Q16627 93 aa24.41■■□□□ 1.5
ITM2C-210ENST00000620962 ABCB5Q2M3G0 1257 aa24.41■■□□□ 1.5
ITM2C-210ENST00000620962 CATSPERGQ6ZRH7 1159 aa24.41■■□□□ 1.5
ITM2C-210ENST00000620962 RIOK1Q9BRS2 568 aaKnown RBP24.41■■□□□ 1.5
ITM2C-210ENST00000620962 ZMYND8Q9ULU4 1186 aaPredicted RBP24.41■■□□□ 1.5
ITM2C-210ENST00000620962 COL6A1P12109 1028 aa24.4■■□□□ 1.5
ITM2C-210ENST00000620962 MAP2K5Q13163 448 aa24.4■■□□□ 1.5
ITM2C-210ENST00000620962 ZYXQ15942 572 aaKnown RBP24.4■■□□□ 1.5
ITM2C-210ENST00000620962 LHX8Q68G74 356 aa24.4■■□□□ 1.5
ITM2C-210ENST00000620962 AACSQ86V21 672 aa24.4■■□□□ 1.5
ITM2C-210ENST00000620962 CABP5Q9NP86 173 aa24.4■■□□□ 1.5
ITM2C-210ENST00000620962 EXOC6BQ9Y2D4 811 aa24.4■■□□□ 1.5
ITM2C-210ENST00000620962 GLRX3O76003 335 aaKnown RBP24.39■■□□□ 1.49
ITM2C-210ENST00000620962 VCAM1P19320 739 aa24.39■■□□□ 1.49
ITM2C-210ENST00000620962 CCND3P30281 292 aaPredicted RBP24.39■■□□□ 1.49
ITM2C-210ENST00000620962 SHMT1P34896 483 aa24.39■■□□□ 1.49
ITM2C-210ENST00000620962 HNRNPUQ00839 825 aaKnown RBP eCLIP24.39■■□□□ 1.49
ITM2C-210ENST00000620962 HSP90AB4PQ58FF6 505 aa24.39■■□□□ 1.49
ITM2C-210ENST00000620962 GPR153Q6NV75 609 aa24.39■■□□□ 1.49
ITM2C-210ENST00000620962 LRCH3Q96II8 777 aa24.39■■□□□ 1.49
ITM2C-210ENST00000620962 CWC22Q9HCG8 908 aaKnown RBP24.39■■□□□ 1.49
ITM2C-210ENST00000620962 PLCD1P51178 756 aa24.38■■□□□ 1.49
ITM2C-210ENST00000620962 TTF1Q15361 905 aaPredicted RBP24.38■■□□□ 1.49
ITM2C-210ENST00000620962 EDC3Q96F86 508 aaKnown RBP24.38■■□□□ 1.49
ITM2C-210ENST00000620962 SLC15A5A6NIM6 579 aa24.37■■□□□ 1.49
ITM2C-210ENST00000620962 GABPAQ06546 454 aa24.37■■□□□ 1.49
ITM2C-210ENST00000620962 ACER1Q8TDN7 264 aa24.37■■□□□ 1.49
ITM2C-210ENST00000620962 MAGEB6P1A0A0J9YX57 407 aa24.36■■□□□ 1.49
ITM2C-210ENST00000620962 SYN1P17600 705 aa24.36■■□□□ 1.49
ITM2C-210ENST00000620962 PTPREP23469 700 aa24.36■■□□□ 1.49
ITM2C-210ENST00000620962 GUCY1A2P33402 732 aa24.36■■□□□ 1.49
ITM2C-210ENST00000620962 MAGEA10P43363 369 aaPredicted RBP24.36■■□□□ 1.49
ITM2C-210ENST00000620962 RHPN1Q8TCX5 695 aa24.36■■□□□ 1.49
ITM2C-210ENST00000620962 POLR3DP05423 398 aaPredicted RBP24.35■■□□□ 1.49
ITM2C-210ENST00000620962 HOXC6P09630 235 aa24.35■■□□□ 1.49
ITM2C-210ENST00000620962 MFSD14CQ5VZR4 134 aa24.35■■□□□ 1.49
ITM2C-210ENST00000620962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.35■■□□□ 1.49
ITM2C-210ENST00000620962 CRNKL1Q9BZJ0 848 aaKnown RBP24.35■■□□□ 1.49
ITM2C-210ENST00000620962 RPAP3Q9H6T3 665 aaPredicted RBP24.35■■□□□ 1.49
ITM2C-210ENST00000620962 BTBD7Q9P203 1132 aa24.35■■□□□ 1.49
ITM2C-210ENST00000620962 ZNF236Q9UL36 1845 aa24.34■■□□□ 1.49
ITM2C-210ENST00000620962 SPDYE16A6NNV3 312 aaPredicted RBP24.34■■□□□ 1.49
ITM2C-210ENST00000620962 PDE6AP16499 860 aa24.34■■□□□ 1.49
ITM2C-210ENST00000620962 GRB14Q14449 540 aa24.34■■□□□ 1.49
ITM2C-210ENST00000620962 LRIT3Q3SXY7 679 aa24.34■■□□□ 1.49
ITM2C-210ENST00000620962 SLC9C2Q5TAH2 1124 aa24.34■■□□□ 1.49
ITM2C-210ENST00000620962 IL1RAPL2Q9NP60 686 aa24.34■■□□□ 1.49
ITM2C-210ENST00000620962 FLRT1Q9NZU1 646 aa24.34■■□□□ 1.49
ITM2C-210ENST00000620962 IVNS1ABPQ9Y6Y0 642 aa24.34■■□□□ 1.49
ITM2C-210ENST00000620962 WDR78Q5VTH9 848 aa24.33■■□□□ 1.49
ITM2C-210ENST00000620962 TDHQ8IZJ6 230 aa24.33■■□□□ 1.49
ITM2C-210ENST00000620962 MYH8P13535 1937 aa24.33■■□□□ 1.49
ITM2C-210ENST00000620962 RLFQ13129 1914 aa24.32■■□□□ 1.48
ITM2C-210ENST00000620962 SEPT2Q15019 361 aa24.32■■□□□ 1.48
ITM2C-210ENST00000620962 LRRC26Q2I0M4 334 aa24.32■■□□□ 1.48
ITM2C-210ENST00000620962 CLASRPQ8N2M8 674 aaKnown RBP24.32■■□□□ 1.48
ITM2C-210ENST00000620962 PANK1Q8TE04 598 aa24.32■■□□□ 1.48
ITM2C-210ENST00000620962 MCM9Q9NXL9 1143 aa24.32■■□□□ 1.48
ITM2C-210ENST00000620962 A0A0G2JMZ2 1700 aa24.32■■□□□ 1.48
ITM2C-210ENST00000620962 MSCO60682 206 aa24.31■■□□□ 1.48
ITM2C-210ENST00000620962 IGHA2P01877 340 aa24.31■■□□□ 1.48
ITM2C-210ENST00000620962 KIF1BPQ96EK5 621 aa24.31■■□□□ 1.48
ITM2C-210ENST00000620962 ZNF532Q9HCE3 1301 aa24.31■■□□□ 1.48
ITM2C-210ENST00000620962 TCRBV5S4A2TA0A5A2 114 aa24.3■■□□□ 1.48
ITM2C-210ENST00000620962 ATP2B2Q01814 1243 aa24.3■■□□□ 1.48
ITM2C-210ENST00000620962 COG2Q14746 738 aa24.3■■□□□ 1.48
ITM2C-210ENST00000620962 UBE2OQ9C0C9 1292 aaKnown RBP24.3■■□□□ 1.48
ITM2C-210ENST00000620962 DCP1AQ9NPI6 582 aaPredicted RBP24.3■■□□□ 1.48
ITM2C-210ENST00000620962 HOXC10Q9NYD6 342 aa24.3■■□□□ 1.48
ITM2C-210ENST00000620962 DDX20Q9UHI6 824 aaKnown RBP24.3■■□□□ 1.48
ITM2C-210ENST00000620962 A0A1W2PRG0 241 aa24.29■■□□□ 1.48
ITM2C-210ENST00000620962 MS4A1P11836 297 aa24.29■■□□□ 1.48
ITM2C-210ENST00000620962 RPAP2Q8IXW5 612 aaPredicted RBP24.29■■□□□ 1.48
ITM2C-210ENST00000620962 NPLOC4Q8TAT6 608 aa24.29■■□□□ 1.48
ITM2C-210ENST00000620962 LPAR1Q92633 364 aa24.29■■□□□ 1.48
ITM2C-210ENST00000620962 SWAP70Q9UH65 585 aa24.29■■□□□ 1.48
ITM2C-210ENST00000620962 GOLIM4O00461 696 aa24.28■■□□□ 1.48
ITM2C-210ENST00000620962 MPHOSPH10O00566 681 aaKnown RBP24.28■■□□□ 1.48
ITM2C-210ENST00000620962 STRNO43815 780 aa24.28■■□□□ 1.48
ITM2C-210ENST00000620962 EVX2Q03828 476 aa24.28■■□□□ 1.48
ITM2C-210ENST00000620962 TMEM179Q6ZVK1 233 aa24.28■■□□□ 1.48
ITM2C-210ENST00000620962 LCORLQ8N3X6 602 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms