RNA–Protein interactions for RNA: ENST00000610976.1

U1.40-201, humanhuman

BASIC

Gene U1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.40-201ENST00000610976 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
U1.40-201ENST00000610976 WDR33Q9C0J8 1336 aaKnown RBP10.33□□□□□ -0.76
U1.40-201ENST00000610976 IGKV6D-41A0A0C4DH26 115 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 SHTN1A0MZ66 631 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 MPHOSPH10O00566 681 aaKnown RBP10.32□□□□□ -0.76
U1.40-201ENST00000610976 TTLL1O95922 423 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 EPS15P42566 896 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 ABCB5Q2M3G0 1257 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 TRIM22Q8IYM9 498 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 NSUN7Q8NE18 718 aaKnown RBP10.32□□□□□ -0.76
U1.40-201ENST00000610976 NKX2-3Q8TAU0 364 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
U1.40-201ENST00000610976 WASF1Q92558 559 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 DCPSQ96C86 337 aaKnown RBP10.32□□□□□ -0.76
U1.40-201ENST00000610976 LZTS2Q9BRK4 669 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 TMEM39BQ9GZU3 492 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 DEFB129Q9H1M3 183 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 MTMR4Q9NYA4 1195 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 RBM27Q9P2N5 1060 aaKnown RBP10.32□□□□□ -0.76
U1.40-201ENST00000610976 STX8Q9UNK0 236 aa10.32□□□□□ -0.76
U1.40-201ENST00000610976 PTPDC1A2A3K4 754 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 EGFRP00533 1210 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 AKR1B1P15121 316 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 IFNAR1P17181 557 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 SSRP1Q08945 709 aaKnown RBP10.31□□□□□ -0.76
U1.40-201ENST00000610976 ST3GAL1Q11201 340 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 TROAPQ12815 778 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 SUPT20HL1Q3ZLR7 823 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 ANGEL2Q5VTE6 544 aaKnown RBP10.31□□□□□ -0.76
U1.40-201ENST00000610976 RCSD1Q6JBY9 416 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 PNMA8AQ86V59 439 aaPredicted RBP10.31□□□□□ -0.76
U1.40-201ENST00000610976 PNMA1Q8ND90 353 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 TRPM4Q8TD43 1214 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 NUP133Q8WUM0 1156 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 CEP95Q96GE4 821 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 TMEM47Q9BQJ4 181 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 DNAJC18Q9H819 358 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 NYAP2Q9P242 653 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 PGAP2Q9UHJ9 254 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 ATP6V1DQ9Y5K8 247 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 STK36Q9NRP7 1315 aa10.31□□□□□ -0.76
U1.40-201ENST00000610976 STX6O43752 255 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 NMT2O60551 498 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 SMARCA1P28370 1054 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 EPHX2P34913 555 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 AKAP17AQ02040 695 aaKnown RBP10.3□□□□□ -0.76
U1.40-201ENST00000610976 RAB3GAP1Q15042 981 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 LARP1BQ659C4 914 aaKnown RBP10.3□□□□□ -0.76
U1.40-201ENST00000610976 SULF1Q8IWU6 871 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 MKL1Q969V6 931 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 TEPSINQ96N21 525 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.3□□□□□ -0.76
U1.40-201ENST00000610976 SH2D4AQ9H788 454 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 SENP2Q9HC62 589 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 NCOA5Q9HCD5 579 aaKnown RBP10.3□□□□□ -0.76
U1.40-201ENST00000610976 ARHGEF10LQ9HCE6 1279 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 GGA3Q9NZ52 723 aa10.3□□□□□ -0.76
U1.40-201ENST00000610976 ORC3Q9UBD5 711 aaPredicted RBP10.3□□□□□ -0.76
U1.40-201ENST00000610976 H3BQV1 296 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 CTNND1O60716 968 aaKnown RBP10.29□□□□□ -0.76
U1.40-201ENST00000610976 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
U1.40-201ENST00000610976 CTDNEP1O95476 244 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 ASNSP08243 561 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 XBP1P17861 261 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 SYT1P21579 422 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 CDC27P30260 824 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 ADD1P35611 737 aaKnown RBP10.29□□□□□ -0.76
U1.40-201ENST00000610976 CAP2P40123 477 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 HIRAP54198 1017 aaPredicted RBP10.29□□□□□ -0.76
U1.40-201ENST00000610976 GRM4Q14833 912 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 GBP4Q96PP9 640 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 MYL10Q9BUA6 226 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 RNF26Q9BY78 433 aaPredicted RBP10.29□□□□□ -0.76
U1.40-201ENST00000610976 ZNF341Q9BYN7 854 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
U1.40-201ENST00000610976 CLIP2Q9UDT6 1046 aa10.29□□□□□ -0.76
U1.40-201ENST00000610976 DEXIO95424 95 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 BRD1O95696 1058 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 GH2P01242 217 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 PARP1P09874 1014 aaKnown RBP10.28□□□□□ -0.76
U1.40-201ENST00000610976 ZSCAN22P10073 491 aaPredicted RBP10.28□□□□□ -0.76
U1.40-201ENST00000610976 RXRAP19793 462 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 NF2P35240 595 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 ICA1Q05084 483 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 TRIM29Q14134 588 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 NTRK3Q16288 839 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 ASPRV1Q53RT3 343 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 GPATCH4Q5T3I0 446 aaKnown RBP10.28□□□□□ -0.76
U1.40-201ENST00000610976 CCDC144CPQ8IYA2 1237 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 FAM177A1Q8N128 213 aaPredicted RBP10.28□□□□□ -0.76
U1.40-201ENST00000610976 DDX11Q96FC9 970 aa10.28□□□□□ -0.76
U1.40-201ENST00000610976 PALM3A6NDB9 673 aaPredicted RBP10.27□□□□□ -0.77
U1.40-201ENST00000610976 FAM196BA6NMK8 535 aa10.27□□□□□ -0.77
U1.40-201ENST00000610976 PRPF3O43395 683 aaKnown RBP10.27□□□□□ -0.77
U1.40-201ENST00000610976 JAK2O60674 1132 aa10.27□□□□□ -0.77
U1.40-201ENST00000610976 EEF2P13639 858 aaKnown RBP10.27□□□□□ -0.77
U1.40-201ENST00000610976 PTMSP20962 102 aa10.27□□□□□ -0.77
U1.40-201ENST00000610976 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
U1.40-201ENST00000610976 SEPT2Q15019 361 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms