RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 LRRC26Q2I0M4 334 aa19.28■□□□□ 0.68
HDDC2-210ENST00000609574 CERKLQ49MI3 558 aaPredicted RBP19.28■□□□□ 0.68
HDDC2-210ENST00000609574 CLUAP1Q96AJ1 413 aa19.28■□□□□ 0.68
HDDC2-210ENST00000609574 DNAJC18Q9H819 358 aa19.28■□□□□ 0.68
HDDC2-210ENST00000609574 SERPINB13Q9UIV8 391 aa19.28■□□□□ 0.68
HDDC2-210ENST00000609574 ABCB5Q2M3G0 1257 aa19.27■□□□□ 0.68
HDDC2-210ENST00000609574 TMED8Q6PL24 325 aaPredicted RBP19.27■□□□□ 0.68
HDDC2-210ENST00000609574 C12orf42Q96LP6 360 aa19.27■□□□□ 0.68
HDDC2-210ENST00000609574 PTPREP23469 700 aa19.26■□□□□ 0.67
HDDC2-210ENST00000609574 DYNLL1P63167 89 aaKnown RBP19.26■□□□□ 0.67
HDDC2-210ENST00000609574 ATP8B2P98198 1209 aa19.26■□□□□ 0.67
HDDC2-210ENST00000609574 MAP3K12Q12852 859 aa19.26■□□□□ 0.67
HDDC2-210ENST00000609574 CATSPERGQ6ZRH7 1159 aa19.26■□□□□ 0.67
HDDC2-210ENST00000609574 ADGRA1Q86SQ6 560 aa19.26■□□□□ 0.67
HDDC2-210ENST00000609574 KIAA1683Q9H0B3 1180 aa19.26■□□□□ 0.67
HDDC2-210ENST00000609574 DDX20Q9UHI6 824 aaKnown RBP19.26■□□□□ 0.67
HDDC2-210ENST00000609574 NDUFB9Q9Y6M9 179 aa19.26■□□□□ 0.67
HDDC2-210ENST00000609574 LAMA3Q16787 3333 aa19.26■□□□□ 0.67
HDDC2-210ENST00000609574 TATDN1Q6P1N9 297 aa19.25■□□□□ 0.67
HDDC2-210ENST00000609574 DPP9Q86TI2 863 aa19.25■□□□□ 0.67
HDDC2-210ENST00000609574 MIGA1Q8NAN2 632 aa19.25■□□□□ 0.67
HDDC2-210ENST00000609574 ARRDC4Q8NCT1 418 aa19.25■□□□□ 0.67
HDDC2-210ENST00000609574 LPAR1Q92633 364 aa19.25■□□□□ 0.67
HDDC2-210ENST00000609574 EHD4Q9H223 541 aa19.25■□□□□ 0.67
HDDC2-210ENST00000609574 PIH1D3Q9NQM4 214 aaKnown RBP19.25■□□□□ 0.67
HDDC2-210ENST00000609574 POLR3DP05423 398 aaPredicted RBP19.24■□□□□ 0.67
HDDC2-210ENST00000609574 POLA2Q14181 598 aa19.24■□□□□ 0.67
HDDC2-210ENST00000609574 SHROOM1Q2M3G4 852 aaPredicted RBP19.24■□□□□ 0.67
HDDC2-210ENST00000609574 ZKSCAN2Q63HK3 967 aa19.24■□□□□ 0.67
HDDC2-210ENST00000609574 MAGEB6Q8N7X4 407 aa19.24■□□□□ 0.67
HDDC2-210ENST00000609574 SSH3Q8TE77 659 aa19.24■□□□□ 0.67
HDDC2-210ENST00000609574 SLC5A4Q9NY91 659 aa19.24■□□□□ 0.67
HDDC2-210ENST00000609574 HOXC10Q9NYD6 342 aa19.24■□□□□ 0.67
HDDC2-210ENST00000609574 A0A0C4DFX4 3053 aa19.24■□□□□ 0.67
HDDC2-210ENST00000609574 CUL9Q8IWT3 2517 aa19.23■□□□□ 0.67
HDDC2-210ENST00000609574 DNM1LO00429 736 aa19.23■□□□□ 0.67
HDDC2-210ENST00000609574 BCAR3O75815 825 aa19.23■□□□□ 0.67
HDDC2-210ENST00000609574 ATN1P54259 1190 aaPredicted RBP19.23■□□□□ 0.67
HDDC2-210ENST00000609574 FAM109BQ6ICB4 259 aaPredicted RBP19.23■□□□□ 0.67
HDDC2-210ENST00000609574 CCDC8Q9H0W5 538 aaPredicted RBP19.23■□□□□ 0.67
HDDC2-210ENST00000609574 DDX60LQ5H9U9 1706 aaKnown RBP19.22■□□□□ 0.67
HDDC2-210ENST00000609574 STRNO43815 780 aa19.22■□□□□ 0.67
HDDC2-210ENST00000609574 HOXC6P09630 235 aa19.22■□□□□ 0.67
HDDC2-210ENST00000609574 VCAM1P19320 739 aa19.22■□□□□ 0.67
HDDC2-210ENST00000609574 LBX2Q6XYB7 198 aa19.22■□□□□ 0.67
HDDC2-210ENST00000609574 FTSJ3Q8IY81 847 aaKnown RBP19.22■□□□□ 0.67
HDDC2-210ENST00000609574 TMEM57Q8N5G2 664 aa19.22■□□□□ 0.67
HDDC2-210ENST00000609574 RPAP3Q9H6T3 665 aaPredicted RBP19.22■□□□□ 0.67
HDDC2-210ENST00000609574 ATAD5Q96QE3 1844 aa19.22■□□□□ 0.67
HDDC2-210ENST00000609574 KBTBD13C9JR72 458 aa19.21■□□□□ 0.67
HDDC2-210ENST00000609574 MPHOSPH10O00566 681 aaKnown RBP19.21■□□□□ 0.67
HDDC2-210ENST00000609574 CNMDO75829 334 aa19.21■□□□□ 0.67
HDDC2-210ENST00000609574 GRB14Q14449 540 aa19.21■□□□□ 0.67
HDDC2-210ENST00000609574 COG2Q14746 738 aa19.21■□□□□ 0.67
HDDC2-210ENST00000609574 MYCNP04198 464 aaPredicted RBP19.2■□□□□ 0.66
HDDC2-210ENST00000609574 CYP2C19P33261 490 aa19.2■□□□□ 0.66
HDDC2-210ENST00000609574 ZNF697Q5TEC3 545 aa19.2■□□□□ 0.66
HDDC2-210ENST00000609574 ERC1Q8IUD2 1116 aa19.2■□□□□ 0.66
HDDC2-210ENST00000609574 FLRT1Q9NZU1 646 aa19.2■□□□□ 0.66
HDDC2-210ENST00000609574 DBNLQ9UJU6 430 aaKnown RBP19.2■□□□□ 0.66
HDDC2-210ENST00000609574 ATP11BQ9Y2G3 1177 aa19.2■□□□□ 0.66
HDDC2-210ENST00000609574 NOP58Q9Y2X3 529 aaKnown RBP19.2■□□□□ 0.66
HDDC2-210ENST00000609574 COL6A3P12111 3177 aa19.2■□□□□ 0.66
HDDC2-210ENST00000609574 ALPK3Q96L96 1907 aa19.19■□□□□ 0.66
HDDC2-210ENST00000609574 RTP1P59025 263 aa19.19■□□□□ 0.66
HDDC2-210ENST00000609574 TTF1Q15361 905 aaPredicted RBP19.19■□□□□ 0.66
HDDC2-210ENST00000609574 ACER1Q8TDN7 264 aa19.19■□□□□ 0.66
HDDC2-210ENST00000609574 CRNKL1Q9BZJ0 848 aaKnown RBP19.19■□□□□ 0.66
HDDC2-210ENST00000609574 TANGO6Q9C0B7 1094 aa19.19■□□□□ 0.66
HDDC2-210ENST00000609574 BTBD7Q9P203 1132 aa19.19■□□□□ 0.66
HDDC2-210ENST00000609574 MAGEB6P1A0A0J9YX57 407 aa19.18■□□□□ 0.66
HDDC2-210ENST00000609574 SPDYE16A6NNV3 312 aaPredicted RBP19.18■□□□□ 0.66
HDDC2-210ENST00000609574 POTEB2H3BUK9 544 aa19.18■□□□□ 0.66
HDDC2-210ENST00000609574 OLFML2BQ68BL8 750 aa19.18■□□□□ 0.66
HDDC2-210ENST00000609574 POTEEQ6S8J3 1075 aa19.18■□□□□ 0.66
HDDC2-210ENST00000609574 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.18■□□□□ 0.66
HDDC2-210ENST00000609574 MB21D1Q8N884 522 aa19.18■□□□□ 0.66
HDDC2-210ENST00000609574 PRDM5Q9NQX1 630 aaPredicted RBP19.18■□□□□ 0.66
HDDC2-210ENST00000609574 TNNQ9UQP3 1299 aa19.18■□□□□ 0.66
HDDC2-210ENST00000609574 PLXNB2O15031 1838 aa19.17■□□□□ 0.66
HDDC2-210ENST00000609574 CCER2I3L3R5 266 aa19.17■□□□□ 0.66
HDDC2-210ENST00000609574 ADORA2AP29274 412 aa19.17■□□□□ 0.66
HDDC2-210ENST00000609574 PLS1Q14651 629 aa19.17■□□□□ 0.66
HDDC2-210ENST00000609574 GJC2Q5T442 439 aaPredicted RBP19.17■□□□□ 0.66
HDDC2-210ENST00000609574 ITPRIPQ8IWB1 547 aa19.17■□□□□ 0.66
HDDC2-210ENST00000609574 NPLOC4Q8TAT6 608 aa19.17■□□□□ 0.66
HDDC2-210ENST00000609574 EAF2Q96CJ1 260 aaPredicted RBP19.17■□□□□ 0.66
HDDC2-210ENST00000609574 FAM161BQ96MY7 647 aa19.17■□□□□ 0.66
HDDC2-210ENST00000609574 C1orf115Q9H7X2 142 aa19.17■□□□□ 0.66
HDDC2-210ENST00000609574 MCM9Q9NXL9 1143 aa19.17■□□□□ 0.66
HDDC2-210ENST00000609574 PLCD1P51178 756 aa19.16■□□□□ 0.66
HDDC2-210ENST00000609574 SEPT2Q15019 361 aa19.16■□□□□ 0.66
HDDC2-210ENST00000609574 HSP90AB4PQ58FF6 505 aa19.16■□□□□ 0.66
HDDC2-210ENST00000609574 SLC39A5Q6ZMH5 540 aa19.16■□□□□ 0.66
HDDC2-210ENST00000609574 AACSQ86V21 672 aa19.16■□□□□ 0.66
HDDC2-210ENST00000609574 SHCBP1Q8NEM2 672 aa19.16■□□□□ 0.66
HDDC2-210ENST00000609574 MROH8Q9H579 483 aa19.16■□□□□ 0.66
HDDC2-210ENST00000609574 SH2D4AQ9H788 454 aa19.16■□□□□ 0.66
HDDC2-210ENST00000609574 TLR7Q9NYK1 1049 aaKnown RBP19.16■□□□□ 0.66
HDDC2-210ENST00000609574 SEPT4O43236 478 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms