RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ZBTB38Q8NAP3 1195 aaPredicted RBP7.16□□□□□ -1.26
LINC00397-202ENST00000606785 FAM13CQ8NE31 585 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 SGSM3Q96HU1 749 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 PICK1Q9NRD5 415 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 DDX3YO15523 660 aaKnown RBP7.15□□□□□ -1.26
LINC00397-202ENST00000606785 CD68P34810 354 aaPredicted RBP7.15□□□□□ -1.26
LINC00397-202ENST00000606785 DGKGP49619 791 aa7.15□□□□□ -1.26
LINC00397-202ENST00000606785 ID3Q02535 119 aa7.15□□□□□ -1.26
LINC00397-202ENST00000606785 DOC2BQ14184 412 aa7.15□□□□□ -1.26
LINC00397-202ENST00000606785 FOXD4L6Q3SYB3 417 aaPredicted RBP7.15□□□□□ -1.26
LINC00397-202ENST00000606785 PPM1JQ5JR12 505 aa7.15□□□□□ -1.26
LINC00397-202ENST00000606785 ZBTB37Q5TC79 503 aa7.15□□□□□ -1.26
LINC00397-202ENST00000606785 FOXD4L3Q6VB84 417 aaPredicted RBP7.15□□□□□ -1.26
LINC00397-202ENST00000606785 TMEM87BQ96K49 555 aa7.15□□□□□ -1.26
LINC00397-202ENST00000606785 DHRS1Q96LJ7 313 aa7.15□□□□□ -1.26
LINC00397-202ENST00000606785 CWC22Q9HCG8 908 aaKnown RBP7.15□□□□□ -1.26
LINC00397-202ENST00000606785 RAD18Q9NS91 495 aa7.15□□□□□ -1.26
LINC00397-202ENST00000606785 KLHL42Q9P2K6 505 aa7.15□□□□□ -1.26
LINC00397-202ENST00000606785 TJP2Q9UDY2 1190 aa7.15□□□□□ -1.26
LINC00397-202ENST00000606785 CCDC163A0A0D9SF12 145 aa7.14□□□□□ -1.27
LINC00397-202ENST00000606785 AGRPO00253 132 aa7.14□□□□□ -1.27
LINC00397-202ENST00000606785 HCLS1P14317 486 aaPredicted RBP7.14□□□□□ -1.27
LINC00397-202ENST00000606785 POLR2BP30876 1174 aaKnown RBP7.14□□□□□ -1.27
LINC00397-202ENST00000606785 ZNF143P52747 638 aaPredicted RBP7.14□□□□□ -1.27
LINC00397-202ENST00000606785 EXOSC6Q5RKV6 272 aaKnown RBP7.14□□□□□ -1.27
LINC00397-202ENST00000606785 SLC6A19Q695T7 634 aa7.14□□□□□ -1.27
LINC00397-202ENST00000606785 KRT26Q7Z3Y9 468 aa7.14□□□□□ -1.27
LINC00397-202ENST00000606785 MRPL41Q8IXM3 137 aaKnown RBP7.14□□□□□ -1.27
LINC00397-202ENST00000606785 DMRTC2Q8IXT2 367 aaPredicted RBP7.14□□□□□ -1.27
LINC00397-202ENST00000606785 PHACTR4Q8IZ21 702 aa7.14□□□□□ -1.27
LINC00397-202ENST00000606785 DCAF11Q8TEB1 546 aa7.14□□□□□ -1.27
LINC00397-202ENST00000606785 DDX56Q9NY93 547 aaKnown RBP7.14□□□□□ -1.27
LINC00397-202ENST00000606785 TTBK1Q5TCY1 1321 aaPredicted RBP7.13□□□□□ -1.27
LINC00397-202ENST00000606785 SCO2A0A1W2PP80 73 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 RGS13O14921 159 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 TMPRSS2O15393 492 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 NID1P14543 1247 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 PMS1P54277 932 aaKnown RBP7.13□□□□□ -1.27
LINC00397-202ENST00000606785 HID1Q8IV36 788 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 RNF214Q8ND24 703 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 ZNF507Q8TCN5 953 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 BTBD6Q96KE9 485 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 SLC6A18Q96N87 628 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 KRTAP9-9Q9BYP9 154 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 KRTAP9-4Q9BYQ2 154 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 KCNK4Q9NYG8 393 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 CRIM1Q9NZV1 1036 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 SUCOQ9UBS9 1254 aaKnown RBP7.13□□□□□ -1.27
LINC00397-202ENST00000606785 PPP1R9AQ9ULJ8 1098 aa7.13□□□□□ -1.27
LINC00397-202ENST00000606785 DEAF1O75398 565 aaPredicted RBP7.12□□□□□ -1.27
LINC00397-202ENST00000606785 NAT2P11245 290 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 NTF4P34130 210 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 COL9A3Q14050 684 aaPredicted RBP7.12□□□□□ -1.27
LINC00397-202ENST00000606785 PLEKHG6Q3KR16 790 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 TM4SF20Q53R12 229 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 NIM1KQ8IY84 436 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 TMEM192Q8IY95 271 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 DTWD1Q8N5C7 304 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 STAG1Q8WVM7 1258 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 NINJ1Q92982 152 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 MFSD3Q96ES6 412 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 CCDC74BQ96LY2 380 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 KIF2CQ99661 725 aa7.12□□□□□ -1.27
LINC00397-202ENST00000606785 TYW1Q9NV66 732 aaKnown RBP7.12□□□□□ -1.27
LINC00397-202ENST00000606785 ANKRD34BA5PLL1 514 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 RFPL3O75679 317 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 GATA4P43694 442 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 C21orf62-AS1Q17RA5 79 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 SV2CQ496J9 727 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 AKAP4Q5JQC9 854 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 NOL8Q76FK4 1167 aaKnown RBP7.11□□□□□ -1.27
LINC00397-202ENST00000606785 PPFIBP1Q86W92 1011 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 UBASH3BQ8TF42 649 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 TMPRSS13Q9BYE2 586 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 IRF2BPLQ9H1B7 796 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 ATXN3LQ9H3M9 355 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 FBRSQ9HAH7 460 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 DISC1Q9NRI5 854 aa7.11□□□□□ -1.27
LINC00397-202ENST00000606785 A0A1W2PQU0 124 aa7.1□□□□□ -1.27
LINC00397-202ENST00000606785 UBOX5O94941 541 aa7.1□□□□□ -1.27
LINC00397-202ENST00000606785 DUOXA2Q1HG44 320 aa7.1□□□□□ -1.27
LINC00397-202ENST00000606785 ARTNQ5T4W7 220 aa7.1□□□□□ -1.27
LINC00397-202ENST00000606785 FOXB2Q5VYV0 432 aa7.1□□□□□ -1.27
LINC00397-202ENST00000606785 KCT2Q8NC54 265 aa7.1□□□□□ -1.27
LINC00397-202ENST00000606785 SMARCC1Q92922 1105 aaPredicted RBP7.1□□□□□ -1.27
LINC00397-202ENST00000606785 KISS1RQ969F8 398 aaPredicted RBP7.1□□□□□ -1.27
LINC00397-202ENST00000606785 EXOC2Q96KP1 924 aa7.1□□□□□ -1.27
LINC00397-202ENST00000606785 APBA2Q99767 749 aa7.1□□□□□ -1.27
LINC00397-202ENST00000606785 ZFP64Q9NPA5 681 aa7.1□□□□□ -1.27
LINC00397-202ENST00000606785 SUSD2Q9UGT4 822 aa7.1□□□□□ -1.27
LINC00397-202ENST00000606785 MEGF11A6BM72 1044 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 CLEC3AO75596 197 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 TP53P04637 393 aaPredicted RBP7.09□□□□□ -1.27
LINC00397-202ENST00000606785 L1CAMP32004 1257 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 GBP1P32455 592 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 CAP2P40123 477 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 PABPC4Q13310 644 aaKnown RBP eCLIP7.09□□□□□ -1.27
LINC00397-202ENST00000606785 NKG7Q16617 165 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 RSPO4Q2I0M5 234 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms