RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 CNMDO75829 334 aa18.93■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 HOXC6P09630 235 aa18.93■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 SHROOM1Q2M3G4 852 aaPredicted RBP18.93■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 TRIM60Q495X7 471 aa18.93■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 NAA16Q6N069 864 aaPredicted RBP18.93■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 POTEEQ6S8J3 1075 aa18.93■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 DPP9Q86TI2 863 aa18.93■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 RNPC3Q96LT9 517 aaKnown RBP18.93■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 PALD1Q9ULE6 856 aa18.93■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 CYBAP13498 195 aa18.92■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 USP14P54578 494 aa18.92■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 GRB14Q14449 540 aa18.92■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 NPLOC4Q8TAT6 608 aa18.92■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 PDLIM7Q9NR12 457 aa18.92■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 FLT1P17948 1338 aa18.92■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 PRUNE2Q8WUY3 3088 aa18.92■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 ANO1Q5XXA6 986 aa18.91■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 METTL16Q86W50 562 aaKnown RBP18.91■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 TRPV1Q8NER1 839 aa18.91■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 C12orf42Q96LP6 360 aa18.91■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 GH2P01242 217 aa18.9■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 ARID4AP29374 1257 aaPredicted RBP18.9■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 ALDH1L2Q3SY69 923 aa18.9■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 CATSPERGQ6ZRH7 1159 aa18.9■□□□□ 0.62
NEDD8-MDP1-204ENST00000605847 TRIM43BA6NCK2 446 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 SEPT4O43236 478 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 SRGAP3O43295 1099 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 UQCRFS1P1P0C7P4 283 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 ADCYAP1R1P41586 468 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 MCAMP43121 646 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 SNX17Q15036 470 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 OLFML2BQ68BL8 750 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 SH3RF1Q7Z6J0 888 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 FERMT2Q96AC1 680 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 TRIM43Q96BQ3 446 aaPredicted RBP18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 SAP30BPQ9UHR5 308 aaKnown RBP18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 TACC3Q9Y6A5 838 aa18.89■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 VCAM1P19320 739 aa18.88■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 PPP4CP60510 307 aa18.88■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 GRIN2CQ14957 1233 aa18.88■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 RAB3GAP1Q15042 981 aa18.88■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 LBX2Q6XYB7 198 aa18.88■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 SLC5A4Q9NY91 659 aa18.88■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 BTBD7Q9P203 1132 aa18.88■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 SIPA1L1O43166 1804 aa18.88■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 ANP32CO43423 234 aa18.87■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 STRNO43815 780 aa18.87■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 RAG1P15918 1043 aa18.87■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 ADORA2AP29274 412 aa18.87■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 C1orf53Q5VUE5 145 aa18.87■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 CDH23Q9H251 3354 aa18.87■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 E9PSI1 815 aa18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 CLTBP09497 229 aa18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 DNAJB2P25686 324 aa18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 TLE2Q04725 743 aa18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 USP38Q8NB14 1042 aa18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 MEIS3Q99687 375 aa18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 KIAA1683Q9H0B3 1180 aa18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 RPAP3Q9H6T3 665 aaPredicted RBP18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 CABP5Q9NP86 173 aa18.86■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 ZNF521Q96K83 1311 aa18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 RLFQ13129 1914 aa18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 SPDYE16A6NNV3 312 aaPredicted RBP18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 LRRC41Q15345 812 aa18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 TTC39AQ5SRH9 613 aa18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 PPM1EQ8WY54 764 aa18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 GAS2L1Q99501 681 aaPredicted RBP18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 ZNF576Q9H609 170 aa18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 SNRKQ9NRH2 765 aa18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 RAPGEFL1Q9UHV5 662 aa18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.85■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 FPGSQ05932 587 aa18.84■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 ATXN2LQ8WWM7 1075 aaKnown RBP18.84■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 FAM122AQ96E09 287 aa18.84■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 API5Q9BZZ5 524 aaKnown RBP18.84■□□□□ 0.61
NEDD8-MDP1-204ENST00000605847 IGHA2P01877 340 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 GNAI3P08754 354 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 ITGB8P26012 769 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 USP5P45974 858 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 G3BP1Q13283 466 aaKnown RBP eCLIP18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 ABCB5Q2M3G0 1257 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 CERKLQ49MI3 558 aaPredicted RBP18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 FAM47AQ5JRC9 791 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 CCDC158Q5M9N0 1113 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 PRAMEF19Q5SWL8 479 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 TATDN1Q6P1N9 297 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 ADGRA1Q86SQ6 560 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 IL27Q8NEV9 243 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 MOV10L1Q9BXT6 1211 aaKnown RBP18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 TMEM39AQ9NV64 488 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 HOXC10Q9NYD6 342 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 SERPINB13Q9UIV8 391 aa18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 NOB1Q9ULX3 412 aaKnown RBP18.83■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 PQBP1O60828 265 aaKnown RBP18.82■□□□□ 0.6
NEDD8-MDP1-204ENST00000605847 ERCC3P19447 782 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 314.5 ms