RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 RARSP54136 660 aaKnown RBP4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 IRX3P78415 501 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 SF3B2Q13435 895 aaKnown RBP4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 TERF2Q15554 542 aa4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 CCDC27Q2M243 656 aa4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 AXDND1Q5T1B0 1012 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 PEAR1Q5VY43 1037 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 CTR9Q6PD62 1173 aa4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 MISP3Q96FF7 219 aa4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 ZFYVE28Q9HCC9 887 aa4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 CTNNA3Q9UI47 895 aa4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 PRDM15P57071 1507 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 EIF4G3O43432 1585 aaKnown RBP4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 ABCC10Q5T3U5 1492 aa4.9□□□□□ -1.62
HMGB1P50-201ENST00000605814 CDK11BP21127 795 aaKnown RBP4.9□□□□□ -1.63
HMGB1P50-201ENST00000605814 MFAP1P55081 439 aaKnown RBP4.9□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF792Q3KQV3 632 aa4.9□□□□□ -1.63
HMGB1P50-201ENST00000605814 BMP2KLQ5H9B9 411 aa4.9□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF574Q6ZN55 896 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P50-201ENST00000605814 SLC38A3Q99624 504 aa4.9□□□□□ -1.63
HMGB1P50-201ENST00000605814 EHD4Q9H223 541 aa4.9□□□□□ -1.63
HMGB1P50-201ENST00000605814 CGNQ9P2M7 1197 aaKnown RBP4.9□□□□□ -1.63
HMGB1P50-201ENST00000605814 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P50-201ENST00000605814 SYNMO15061 1565 aa4.9□□□□□ -1.63
HMGB1P50-201ENST00000605814 PRAG1Q86YV5 1406 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 SSFA2P28290 1259 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 KCNJ4P48050 445 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 TMF1P82094 1093 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 MVPQ14764 893 aaKnown RBP4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF648Q5T619 568 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF771Q7L3S4 317 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 CCNJLQ8IV13 435 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 KSR1Q8IVT5 923 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 KIAA1524Q8TCG1 905 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 BCL7CQ8WUZ0 217 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 POLR3GLQ9BT43 218 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 ACSS3Q9H6R3 686 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 RC3H2Q9HBD1 1191 aaKnown RBP4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 ANO2Q9NQ90 1003 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 USP25Q9UHP3 1055 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 ERBINQ96RT1 1412 aa4.89□□□□□ -1.63
HMGB1P50-201ENST00000605814 WDR7Q9Y4E6 1490 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 KIAA0586Q9BVV6 1533 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 AK9Q5TCS8 1911 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 EIF2AK4Q9P2K8 1649 aaKnown RBP4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 A0A1W2PP55 124 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 RNGTTO60942 597 aaKnown RBP4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 AOC2O75106 756 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 FARP2O94887 1054 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 GRIA4P48058 902 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 FKBP4Q02790 459 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 NUCB1Q02818 461 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 AP3B2Q13367 1082 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF211Q13398 564 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 RABEP1Q15276 862 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF423Q2M1K9 1284 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 SPRED3Q2MJR0 410 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 OGFOD3Q6PK18 319 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 NFXL1Q6ZNB6 911 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 GJD3Q8N144 294 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 PANK1Q8TE04 598 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 GATA6Q92908 595 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF622Q969S3 477 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 SYAP1Q96A49 352 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 ATXN3LQ9H3M9 355 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 SSU72Q9NP77 194 aaKnown RBP4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 CCDC87Q9NVE4 849 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 PAXBP1Q9Y5B6 917 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 ITSN2Q9NZM3 1697 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 POLR3AO14802 1390 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 PLB1Q6P1J6 1458 aa4.88□□□□□ -1.63
HMGB1P50-201ENST00000605814 ASXL1Q8IXJ9 1541 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 NESP48681 1621 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 APAF1O14727 1248 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 FZD6O60353 706 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 REC8O95072 547 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 PAPLNO95428 1278 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 B3GALT4O96024 378 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 CTSBP07858 339 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 FAM87AP0C7U9 286 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 CAPN2P17655 700 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 CHAF1AQ13111 956 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 MUM1L1Q5H9M0 696 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 CAVIN1Q6NZI2 390 aaKnown RBP4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 GALNT12Q8IXK2 581 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 KRT222Q8N1A0 295 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 PI4K2BQ8TCG2 481 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 GPT2Q8TD30 523 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 NETO1Q8TDF5 533 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 FAM168AQ92567 244 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 SECISBP2LQ93073 1101 aaKnown RBP4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 NRSN2Q9GZP1 204 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 TSPY26PQ9H489 355 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 BRMS1Q9HCU9 246 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 DDX19BQ9UMR2 479 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 KNSTRNQ9Y448 316 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 FAM135AQ9P2D6 1515 aa4.87□□□□□ -1.63
HMGB1P50-201ENST00000605814 CLTCL1P53675 1640 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 CROCC2H7BZ55 1655 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms