RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 ACER1Q8TDN7 264 aa23.62■■□□□ 1.37
SHKBP1-222ENST00000600320 HHIPL1Q96JK4 782 aa23.62■■□□□ 1.37
SHKBP1-222ENST00000600320 JAKMIP1Q96N16 626 aaKnown RBP23.62■■□□□ 1.37
SHKBP1-222ENST00000600320 C22orf23Q9BZE7 217 aa23.62■■□□□ 1.37
SHKBP1-222ENST00000600320 SLC10A3P09131 477 aa23.61■■□□□ 1.37
SHKBP1-222ENST00000600320 CPA1P15085 419 aa23.61■■□□□ 1.37
SHKBP1-222ENST00000600320 ICA1Q05084 483 aa23.61■■□□□ 1.37
SHKBP1-222ENST00000600320 PPATQ06203 517 aa23.61■■□□□ 1.37
SHKBP1-222ENST00000600320 MKRN3Q13064 507 aaKnown RBP23.61■■□□□ 1.37
SHKBP1-222ENST00000600320 SPRYD7Q5W111 196 aa23.61■■□□□ 1.37
SHKBP1-222ENST00000600320 TCP11L1Q9NUJ3 509 aa23.61■■□□□ 1.37
SHKBP1-222ENST00000600320 AFG3L2Q9Y4W6 797 aa23.61■■□□□ 1.37
SHKBP1-222ENST00000600320 A0A1W2PRG0 241 aa23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 FAM155AB1AL88 458 aaPredicted RBP23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 EEF2P13639 858 aaKnown RBP23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 NT5C2P49902 561 aa23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 PPIL2Q13356 520 aa23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 DEFB115Q30KQ5 88 aa23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 CYP4F22Q6NT55 531 aa23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 IL17RAQ96F46 866 aa23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 WDR18Q9BV38 432 aa23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 KANSL2Q9H9L4 492 aa23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 MTMR4Q9NYA4 1195 aa23.6■■□□□ 1.37
SHKBP1-222ENST00000600320 IRF6O14896 467 aa23.59■■□□□ 1.37
SHKBP1-222ENST00000600320 ECE1P42892 770 aa23.59■■□□□ 1.37
SHKBP1-222ENST00000600320 NOVP48745 357 aa23.59■■□□□ 1.37
SHKBP1-222ENST00000600320 RBM25P49756 843 aaKnown RBP23.59■■□□□ 1.37
SHKBP1-222ENST00000600320 ANAPC15P60006 121 aa23.59■■□□□ 1.37
SHKBP1-222ENST00000600320 SPP2Q13103 211 aa23.59■■□□□ 1.37
SHKBP1-222ENST00000600320 PAXIP1Q6ZW49 1069 aaPredicted RBP23.59■■□□□ 1.37
SHKBP1-222ENST00000600320 TCEANC2Q96MN5 208 aa23.59■■□□□ 1.37
SHKBP1-222ENST00000600320 AS3MTQ9HBK9 375 aa23.59■■□□□ 1.37
SHKBP1-222ENST00000600320 PRC1O43663 620 aa23.58■■□□□ 1.37
SHKBP1-222ENST00000600320 ATP2B2Q01814 1243 aa23.58■■□□□ 1.37
SHKBP1-222ENST00000600320 RCSD1Q6JBY9 416 aa23.58■■□□□ 1.37
SHKBP1-222ENST00000600320 ZNF280CQ8ND82 737 aa23.58■■□□□ 1.37
SHKBP1-222ENST00000600320 ZSCAN10Q96SZ4 725 aaPredicted RBP23.58■■□□□ 1.37
SHKBP1-222ENST00000600320 UPF2Q9HAU5 1272 aaKnown RBP23.58■■□□□ 1.37
SHKBP1-222ENST00000600320 GPHNQ9NQX3 736 aaPredicted RBP23.58■■□□□ 1.37
SHKBP1-222ENST00000600320 NYAP2Q9P242 653 aa23.58■■□□□ 1.37
SHKBP1-222ENST00000600320 TRIM75PA6NK02 468 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 MCM5P33992 734 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 EXOSC10Q01780 885 aaKnown RBP23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 DGKZQ13574 1117 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 SEC23AQ15436 765 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 DHX32Q7L7V1 743 aaKnown RBP23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 IQCA1Q86XH1 822 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 TBC1D32Q96NH3 1257 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 KIF2CQ99661 725 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 LRRC2Q9BYS8 371 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 TM6SF1Q9BZW5 370 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 CLIP2Q9UDT6 1046 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 KCNH4Q9UQ05 1017 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 TNKSO95271 1327 aa23.57■■□□□ 1.36
SHKBP1-222ENST00000600320 TTLL1O95922 423 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 CASTP20810 708 aaKnown RBP23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 GRM1Q13255 1194 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 BLOC1S2Q6QNY1 142 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 LRRC47Q8N1G4 583 aaKnown RBP23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 ENAHQ8N8S7 591 aaPredicted RBP23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 CCDC102AQ96A19 550 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 CAPNS2Q96L46 248 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 ZIC5Q96T25 663 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 UBAC1Q9BSL1 405 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 TBC1D2Q9BYX2 928 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 SENP2Q9HC62 589 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 ARHGEF10LQ9HCE6 1279 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 ZSWIM6Q9HCJ5 1215 aa23.56■■□□□ 1.36
SHKBP1-222ENST00000600320 IFIT3O14879 490 aaKnown RBP23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 ZBTB48P10074 688 aaPredicted RBP23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 RPS6KB1P23443 525 aa23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 PSMA5P28066 241 aa23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 MTMR2Q13614 643 aa23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 ZYXQ15942 572 aaKnown RBP23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 IGDCC4Q8TDY8 1250 aa23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 UPF3BQ9BZI7 483 aaKnown RBP23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 STX8Q9UNK0 236 aa23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 TMX2Q9Y320 296 aa23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 PTPRFP10586 1907 aa23.55■■□□□ 1.36
SHKBP1-222ENST00000600320 USP17L10C9JJH3 530 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 CXCL11O14625 94 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 BACE1P56817 501 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 KIAA1755Q5JYT7 1200 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 IFFO2Q5TF58 517 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 ANKS1AQ92625 1134 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 MKL1Q969V6 931 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 MS4A4AQ96JQ5 239 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 FEZ1Q99689 392 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 TMEM47Q9BQJ4 181 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 KIAA1683Q9H0B3 1180 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 MYH4Q9Y623 1939 aa23.54■■□□□ 1.36
SHKBP1-222ENST00000600320 SH2B2O14492 632 aaPredicted RBP23.53■■□□□ 1.36
SHKBP1-222ENST00000600320 HMGB1P09429 215 aaKnown RBP23.53■■□□□ 1.36
SHKBP1-222ENST00000600320 MOGSQ13724 837 aa23.53■■□□□ 1.36
SHKBP1-222ENST00000600320 TMEM67Q5HYA8 995 aa23.53■■□□□ 1.36
SHKBP1-222ENST00000600320 RUFY3Q7L099 469 aa23.53■■□□□ 1.36
SHKBP1-222ENST00000600320 DGKHQ86XP1 1220 aa23.53■■□□□ 1.36
SHKBP1-222ENST00000600320 TMEM87BQ96K49 555 aa23.53■■□□□ 1.36
SHKBP1-222ENST00000600320 TTC14Q96N46 770 aa23.53■■□□□ 1.36
SHKBP1-222ENST00000600320 EMILIN3Q9NT22 766 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms