RNA–Protein interactions for RNA: ENST00000593234.5

LINC00907-209, long intergenic non-protein coding RNA 907, human

TSL 1 (best) BASIC

Gene LINC00907, Length 3,376 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00907-209	ENST00000593234	RRN3	Q9NYV6	651 aa		4.36	□□□□□ -1.71
LINC00907-209	ENST00000593234	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.36	□□□□□ -1.71
LINC00907-209	ENST00000593234	MTA2	O94776	668 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	PF4V1	P10720	104 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	IARS	P41252	1262 aa	Known RBP	4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	BCAM	P50895	628 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	PURA	Q00577	322 aa	Known RBP	4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	SLC20A2	Q08357	652 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	SAFB	Q15424	915 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	HYI	Q5T013	277 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	ATRIP	Q8WXE1	791 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	FAM210A	Q96ND0	272 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	SUCO	Q9UBS9	1254 aa	Known RBP	4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	ODF2L	Q9ULJ1	636 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	CHMP3	Q9Y3E7	222 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	DGKB	Q9Y6T7	804 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	UGGT1	Q9NYU2	1555 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	CAMSAP1	Q5T5Y3	1602 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	FAM86C2P	A6NEL3	165 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	COQ9	O75208	318 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	MT-CO1	P00395	513 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	OAS2	P29728	719 aa	Known RBP	4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	STT3A	P46977	705 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	CD151	P48509	253 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	PKN3	Q6P5Z2	889 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	SLC9A9	Q8IVB4	645 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	IFNL2	Q8IZJ0	200 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	JMY	Q8N9B5	988 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	TRIM52	Q96A61	297 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	TBC1D20	Q96BZ9	403 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	CCDC34	Q96HJ3	373 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	FERD3L	Q96RJ6	166 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	HERPUD2	Q9BSE4	406 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	APOL5	Q9BWW9	433 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	RAB6B	Q9NRW1	208 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	STRIP2	Q9ULQ0	834 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	UHRF1BP1	Q6BDS2	1440 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	MIA2	Q96PC5	1412 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	ARHGAP23	Q9P227	1491 aa		4.35	□□□□□ -1.71
LINC00907-209	ENST00000593234	UBR1	Q8IWV7	1749 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	CASQ1	P31415	396 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	CCNF	P41002	786 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	DGKG	P49619	791 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	CLK1	P49759	484 aa	Known RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	EIF6	P56537	245 aa	Known RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	DDX10	Q13206	875 aa	Known RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	ZNF460	Q14592	562 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	ARHGAP29	Q52LW3	1261 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	GK5	Q6ZS86	529 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	PNMA8A	Q86V59	439 aa	Predicted RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	PACS2	Q86VP3	889 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	ZNF713	Q8N859	430 aa	Predicted RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	ACRBP	Q8NEB7	543 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	SNX21	Q969T3	373 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	HVCN1	Q96D96	273 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	SERINC2	Q96SA4	455 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	USB1	Q9BQ65	265 aa	Known RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	LGR6	Q9HBX8	967 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	PRDM9	Q9NQV7	894 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	ERBB4	Q15303	1308 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	KLRG2	A4D1S0	409 aa	Predicted RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	PES1	O00541	588 aa	Known RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	GART	P22102	1010 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	HTR3A	P46098	478 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	GDF10	P55107	478 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	SEPT7	Q16181	437 aa	Known RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	ZC3H12A	Q5D1E8	599 aa	Known RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	LMNTD2	Q8IXW0	634 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	CFAP53	Q96M91	514 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	VTA1	Q9NP79	307 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	PRAG1	Q86YV5	1406 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	PIK3C2B	O00750	1634 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	ALK	Q9UM73	1620 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	IQGAP1	P46940	1657 aa		4.34	□□□□□ -1.71
LINC00907-209	ENST00000593234	SYNDIG1L	A6NDD5	238 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	ORC4	O43929	436 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	ADCY3	O60266	1144 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	KPNA6	O60684	536 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	GADD45B	O75293	160 aa	Predicted RBP	4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	TIPRL	O75663	272 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	GFPT2	O94808	682 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	CELA3A	P09093	270 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	KCNA2	P16389	499 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	EIF5	P55010	431 aa	Known RBP	4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	TAF11	Q15544	211 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	HEATR6	Q6AI08	1181 aa	Known RBP	4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	OTOP3	Q7RTS5	596 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	ABTB2	Q8N961	1025 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	BAP1	Q92560	729 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	KLRG1	Q96E93	195 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	EXOC2	Q96KP1	924 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	RHOV	Q96L33	236 aa		4.34	□□□□□ -1.72
LINC00907-209	ENST00000593234	LGR4	Q9BXB1	951 aa		4.34	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms