RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 C16orf59Q7L2K0 433 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 SLC44A5Q8NCS7 719 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 SIL1Q9H173 461 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 YBX2Q9Y2T7 364 aaKnown RBP9.2□□□□□ -0.94
VAT1-209ENST00000592388 FOCADQ5VW36 1801 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 EYA2O00167 538 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 RFXAPO00287 272 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 CYBAP13498 195 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 FGFR2P21802 821 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 LRRC41Q15345 812 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 PUM3Q15397 648 aaKnown RBP9.19□□□□□ -0.94
VAT1-209ENST00000592388 ALDH1L2Q3SY69 923 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 SH3D19Q5HYK7 790 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 ATG9AQ7Z3C6 839 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 TRMT2AQ8IZ69 625 aaKnown RBP9.19□□□□□ -0.94
VAT1-209ENST00000592388 NPLOC4Q8TAT6 608 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 ANKS1AQ92625 1134 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 NOB1Q9ULX3 412 aaKnown RBP9.19□□□□□ -0.94
VAT1-209ENST00000592388 COG5Q9UP83 839 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 LRRC37A2A6NM11 1700 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 USP34Q70CQ2 3546 aa9.19□□□□□ -0.94
VAT1-209ENST00000592388 LOC285556D6RIA3 1793 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 SIPA1L1O43166 1804 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 CACNA1GO43497 2377 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 ENTPD3O75355 529 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 TIMP1P01033 207 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 UBTFL1P0CB47 393 aaPredicted RBP9.18□□□□□ -0.94
VAT1-209ENST00000592388 HOXA7P31268 230 aaPredicted RBP9.18□□□□□ -0.94
VAT1-209ENST00000592388 FAAP100Q0VG06 881 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 PICALMQ13492 652 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 MTMR2Q13614 643 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 RASIP1Q5U651 963 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 KRT40Q6A162 431 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 ZNF365Q70YC5 407 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 HLA-CQ95604 372 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 MEIS3Q99687 375 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 KCNH6Q9H252 994 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.18□□□□□ -0.94
VAT1-209ENST00000592388 TMOD4Q9NZQ9 345 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 PA2G4Q9UQ80 394 aaKnown RBP9.18□□□□□ -0.94
VAT1-209ENST00000592388 TNNQ9UQP3 1299 aa9.18□□□□□ -0.94
VAT1-209ENST00000592388 KIF16BQ96L93 1317 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 USP17L5A8MUK1 530 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 APBB1O00213 710 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 GTPBP6O43824 516 aaPredicted RBP9.17□□□□□ -0.94
VAT1-209ENST00000592388 GLRX3O76003 335 aaKnown RBP9.17□□□□□ -0.94
VAT1-209ENST00000592388 IFIT1P09914 478 aaKnown RBP9.17□□□□□ -0.94
VAT1-209ENST00000592388 SLC5A1P13866 664 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 MYOGP15173 224 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 PTPREP23469 700 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 PRDX5P30044 214 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 ADORA1P30542 326 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 RABGGTBP53611 331 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 PPIGQ13427 754 aaKnown RBP eCLIP9.17□□□□□ -0.94
VAT1-209ENST00000592388 FAM47AQ5JRC9 791 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 PRAMEF19Q5SWL8 479 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 CCDC174Q6PII3 467 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 IDI2Q9BXS1 227 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 OSBPL5Q9H0X9 879 aaPredicted RBP9.17□□□□□ -0.94
VAT1-209ENST00000592388 AS3MTQ9HBK9 375 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 DDX4Q9NQI0 724 aaKnown RBP9.17□□□□□ -0.94
VAT1-209ENST00000592388 MTCH2Q9Y6C9 303 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 CFAP54Q96N23 3096 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 CHD7Q9P2D1 2997 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 CHD9Q3L8U1 2897 aa9.17□□□□□ -0.94
VAT1-209ENST00000592388 SLC15A5A6NIM6 579 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 DCDC2CA8MYV0 355 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 SEPT4O43236 478 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 CSF2RAP15509 400 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
VAT1-209ENST00000592388 PHKA1P46020 1223 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 BACE1P56817 501 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 RRP1BQ14684 758 aaKnown RBP9.16□□□□□ -0.94
VAT1-209ENST00000592388 ATP2B3Q16720 1220 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 MFSD5Q6N075 450 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 GJD3Q8N144 294 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 WDR66Q8TBY9 1149 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 LPIN2Q92539 896 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 TBC1D2Q9BYX2 928 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 CERS4Q9HA82 394 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 PHF24Q9UPV7 400 aa9.16□□□□□ -0.94
VAT1-209ENST00000592388 TBC1D12O60347 775 aa9.15□□□□□ -0.94
VAT1-209ENST00000592388 CNMDO75829 334 aa9.15□□□□□ -0.94
VAT1-209ENST00000592388 LDHBP07195 334 aaKnown RBP9.15□□□□□ -0.94
VAT1-209ENST00000592388 HOXC6P09630 235 aa9.15□□□□□ -0.94
VAT1-209ENST00000592388 ALADP13716 330 aa9.15□□□□□ -0.94
VAT1-209ENST00000592388 CAP2P40123 477 aa9.15□□□□□ -0.94
VAT1-209ENST00000592388 RARSP54136 660 aaKnown RBP9.15□□□□□ -0.94
VAT1-209ENST00000592388 CCNA1P78396 465 aa9.15□□□□□ -0.94
VAT1-209ENST00000592388 PSRC1Q6PGN9 363 aaPredicted RBP9.15□□□□□ -0.94
VAT1-209ENST00000592388 DPP9Q86TI2 863 aa9.15□□□□□ -0.94
VAT1-209ENST00000592388 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.15□□□□□ -0.94
VAT1-209ENST00000592388 IVNS1ABPQ9Y6Y0 642 aa9.15□□□□□ -0.94
VAT1-209ENST00000592388 MYH1P12882 1939 aa9.15□□□□□ -0.95
VAT1-209ENST00000592388 RFX7Q2KHR2 1363 aa9.14□□□□□ -0.95
VAT1-209ENST00000592388 A0A1W2PQ45 241 aaPredicted RBP9.14□□□□□ -0.95
VAT1-209ENST00000592388 A0A1W2PQY0 241 aa9.14□□□□□ -0.95
VAT1-209ENST00000592388 CIAO1O76071 339 aa9.14□□□□□ -0.95
VAT1-209ENST00000592388 PGK1P00558 417 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms