RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 FMNL1O95466 1100 aaPredicted RBP11.79□□□□□ -0.52
GGA3-209ENST00000580646 POLR3DP05423 398 aaPredicted RBP11.79□□□□□ -0.52
GGA3-209ENST00000580646 CTGFP29279 349 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 HMGCS2P54868 508 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 PRMT2P55345 433 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 GABPAQ06546 454 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 SHROOM1Q2M3G4 852 aaPredicted RBP11.79□□□□□ -0.52
GGA3-209ENST00000580646 SH3D19Q5HYK7 790 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 TREML2Q5T2D2 321 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 C12orf60Q5U649 245 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 ZNF589Q86UQ0 364 aaPredicted RBP11.79□□□□□ -0.52
GGA3-209ENST00000580646 IFNL3Q8IZI9 196 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 TRIM47Q96LD4 638 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 DSCC1Q9BVC3 393 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 EPB41L4AQ9HCS5 686 aaPredicted RBP11.79□□□□□ -0.52
GGA3-209ENST00000580646 SWAP70Q9UH65 585 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 ZBTB21Q9ULJ3 1066 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 SGSM2O43147 1006 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 CDC45O75419 566 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 HSPD1P10809 573 aaKnown RBP11.78□□□□□ -0.52
GGA3-209ENST00000580646 HOXD10P28358 340 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 PLCD1P51178 756 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 BACE1P56817 501 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 PABPC4Q13310 644 aaKnown RBP eCLIP11.78□□□□□ -0.52
GGA3-209ENST00000580646 SLC9C1Q4G0N8 1177 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 TATDN1Q6P1N9 297 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 CTR9Q6PD62 1173 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 CCDC129Q6ZRS4 1044 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 NBPF11Q86T75 865 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 SMCR8Q8TEV9 937 aaPredicted RBP11.78□□□□□ -0.52
GGA3-209ENST00000580646 NAPBQ9H115 298 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 SRRDQ9UH36 339 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 PNMA3Q9UL41 463 aa11.78□□□□□ -0.52
GGA3-209ENST00000580646 C19orf81C9J6K1 198 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 USP17L10C9JJH3 530 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 USP17L12C9JPN9 530 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 USP17L21D6R901 530 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 GH2P01242 217 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 APPP05067 770 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 OSBPP22059 807 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 TDO2P48775 406 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 MTMR2Q13614 643 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 CASC1Q6TDU7 716 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 C16orf86Q6ZW13 317 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 ZNF333Q96JL9 665 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 TMOD4Q9NZQ9 345 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 ANAPC4Q9UJX5 808 aa11.77□□□□□ -0.53
GGA3-209ENST00000580646 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
GGA3-209ENST00000580646 PCP11498 1178 aaKnown RBP11.76□□□□□ -0.53
GGA3-209ENST00000580646 SHMT1P34896 483 aa11.76□□□□□ -0.53
GGA3-209ENST00000580646 NT5C2P49902 561 aa11.76□□□□□ -0.53
GGA3-209ENST00000580646 FCGRTP55899 365 aa11.76□□□□□ -0.53
GGA3-209ENST00000580646 CERKLQ49MI3 558 aaPredicted RBP11.76□□□□□ -0.53
GGA3-209ENST00000580646 VPS53Q5VIR6 699 aa11.76□□□□□ -0.53
GGA3-209ENST00000580646 ESYT1Q9BSJ8 1104 aa11.76□□□□□ -0.53
GGA3-209ENST00000580646 ASCC2Q9H1I8 757 aaPredicted RBP11.76□□□□□ -0.53
GGA3-209ENST00000580646 ZNF287Q9HBT7 754 aa11.76□□□□□ -0.53
GGA3-209ENST00000580646 FGAP02671 866 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 SLC3A2P08195 630 aaKnown RBP11.75□□□□□ -0.53
GGA3-209ENST00000580646 HOXA7P31268 230 aaPredicted RBP11.75□□□□□ -0.53
GGA3-209ENST00000580646 GCLCP48506 637 aaPredicted RBP11.75□□□□□ -0.53
GGA3-209ENST00000580646 ABCB5Q2M3G0 1257 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 ANKRD13CQ8N6S4 541 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 RAET1EQ8TD07 263 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 SH3TC2Q8TF17 1288 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 TMEM106CQ9BVX2 250 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 IL25Q9H293 177 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 CABP5Q9NP86 173 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 CTNNA3Q9UI47 895 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 MYH4Q9Y623 1939 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 MYPNQ86TC9 1320 aa11.75□□□□□ -0.53
GGA3-209ENST00000580646 LOC285556D6RIA3 1793 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 MKI67P46013 3256 aaKnown RBP11.74□□□□□ -0.53
GGA3-209ENST00000580646 EPB41L2O43491 1005 aaKnown RBP11.74□□□□□ -0.53
GGA3-209ENST00000580646 FGRP09769 529 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 CYP2D6P10635 497 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
GGA3-209ENST00000580646 EVX2Q03828 476 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 PRKCZQ05513 592 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 PPARAQ07869 468 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 RAB3GAP1Q15042 981 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 FAM110CQ1W6H9 321 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 CCDC17Q96LX7 622 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 P2RX7Q99572 595 aaKnown RBP11.74□□□□□ -0.53
GGA3-209ENST00000580646 EMILIN3Q9NT22 766 aa11.74□□□□□ -0.53
GGA3-209ENST00000580646 CYP2D7A0A087X1C5 515 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 MINDY4BA8MYZ0 360 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 TNPO2O14787 897 aaKnown RBP11.73□□□□□ -0.53
GGA3-209ENST00000580646 EIF5BO60841 1220 aaKnown RBP11.73□□□□□ -0.53
GGA3-209ENST00000580646 MYCP01106 439 aaPredicted RBP11.73□□□□□ -0.53
GGA3-209ENST00000580646 EN2P19622 333 aaPredicted RBP11.73□□□□□ -0.53
GGA3-209ENST00000580646 GRK4P32298 578 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 HTTP42858 3142 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 CDK8P49336 464 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 PDE4BQ07343 736 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 HABP4Q5JVS0 413 aaKnown RBP11.73□□□□□ -0.53
GGA3-209ENST00000580646 KIAA1211Q6ZU35 1233 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 ACER1Q8TDN7 264 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 MAP4K1Q92918 833 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms