RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SF3B2Q13435 895 aaKnown RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 IMMTQ16891 758 aaKnown RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 ZMYM1Q5SVZ6 1142 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 FSIP1Q8NA03 581 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 NSUN7Q8NE18 718 aaKnown RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 XAGE2Q96GT9 111 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 ZNF396Q96N95 335 aaPredicted RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 CLSTN2Q9H4D0 955 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 PYCARDQ9ULZ3 195 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 ELP1O95163 1332 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 SPATA31A3Q5VYP0 1347 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 M0R2C6 588 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 PFKFB2O60825 505 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 GNL2Q13823 731 aaKnown RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 STK38Q15208 465 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 INTS6LQ5JSJ4 861 aaKnown RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 LDHAL6AQ6ZMR3 332 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 SYNE4Q8N205 404 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 OSBP2Q969R2 916 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 USP28Q96RU2 1077 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 SLIT3O75094 1523 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 KLF18A0A0U1RQI7 1052 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 GOLGA8BA8MQT2 603 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 ZAP70P43403 619 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 DAB2P98082 770 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 TRDNQ13061 729 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 GJD3Q8N144 294 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 CDK15Q96Q40 435 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 DSCC1Q9BVC3 393 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 PDCL3Q9H2J4 239 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 CTNNA3Q9UI47 895 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 AKAP2Q9Y2D5 859 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 MAP4K5Q9Y4K4 846 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 PPME1Q9Y570 386 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 LMO7Q8WWI1 1683 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 TERF1P54274 439 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 FILIP1Q7Z7B0 1213 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 TNS4Q8IZW8 715 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 STK11IPQ8N1F8 1099 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 STAG2Q8N3U4 1231 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 C8orf76Q96K31 380 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 TOMM22Q9NS69 142 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 ORC3Q9UBD5 711 aaPredicted RBP6.22□□□□□ -1.41
VAPA-203ENST00000577539 ASAP1Q9ULH1 1129 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 SH3TC1Q8TE82 1336 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 ERVV-2B6SEH9 535 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 PRC1O43663 620 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 TPM3P06753 285 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 PDIA3P30101 505 aaKnown RBP6.22□□□□□ -1.41
VAPA-203ENST00000577539 LRMPQ12912 555 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 TCIRG1Q13488 830 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 ATP2B3Q16720 1220 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 SYNE3Q6ZMZ3 975 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 UBXN4Q92575 508 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 ALDH8A1Q9H2A2 487 aaPredicted RBP6.22□□□□□ -1.41
VAPA-203ENST00000577539 NRBP1Q9UHY1 535 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 WDR17Q8IZU2 1322 aa6.22□□□□□ -1.41
VAPA-203ENST00000577539 DYNC1I1O14576 645 aa6.21□□□□□ -1.41
VAPA-203ENST00000577539 ZNF213O14771 459 aa6.21□□□□□ -1.41
VAPA-203ENST00000577539 STARD3NLO95772 234 aa6.21□□□□□ -1.41
VAPA-203ENST00000577539 RXRAP19793 462 aa6.21□□□□□ -1.41
VAPA-203ENST00000577539 SCARF1Q14162 830 aa6.21□□□□□ -1.41
VAPA-203ENST00000577539 ZDHHC1Q8WTX9 485 aa6.21□□□□□ -1.41
VAPA-203ENST00000577539 LLPHQ9BRT6 129 aaKnown RBP6.21□□□□□ -1.41
VAPA-203ENST00000577539 GJB4Q9NTQ9 266 aa6.21□□□□□ -1.41
VAPA-203ENST00000577539 CLIP2Q9UDT6 1046 aa6.21□□□□□ -1.41
VAPA-203ENST00000577539 ANKRD62A6NC57 917 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 SIAH2O43255 324 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 FGAP02671 866 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 ADD1P35611 737 aaKnown RBP6.21□□□□□ -1.42
VAPA-203ENST00000577539 NAALADL2Q58DX5 795 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 NFXL1Q6ZNB6 911 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 BRINP3Q76B58 766 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 GLYCTKQ8IVS8 523 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 CCDC144CPQ8IYA2 1237 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 C16orf45Q96MC5 204 aaPredicted RBP6.21□□□□□ -1.42
VAPA-203ENST00000577539 GPR108Q9NPR9 543 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 BIN2Q9UBW5 565 aaPredicted RBP6.21□□□□□ -1.42
VAPA-203ENST00000577539 TRMT112Q9UI30 125 aaKnown RBP6.21□□□□□ -1.42
VAPA-203ENST00000577539 MST1RQ04912 1400 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 TNS3Q68CZ2 1445 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 TUBGCP6Q96RT7 1819 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 A0A1B0GVL5 298 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 BIN1O00499 593 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 CTDNEP1O95476 244 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 INHAP05111 366 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 SLC9C2Q5TAH2 1124 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 SH3PXD2AQ5TCZ1 1133 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 NAA16Q6N069 864 aaPredicted RBP6.21□□□□□ -1.42
VAPA-203ENST00000577539 TMC4Q7Z404 712 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 WNT2BQ93097 391 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 CHMP4CQ96CF2 233 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 GMLQ99445 158 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 BCS1LQ9Y276 419 aa6.21□□□□□ -1.42
VAPA-203ENST00000577539 GPAA1O43292 621 aa6.2□□□□□ -1.42
VAPA-203ENST00000577539 DHX16O60231 1041 aaKnown RBP6.2□□□□□ -1.42
VAPA-203ENST00000577539 ZNF75DP51815 510 aa6.2□□□□□ -1.42
VAPA-203ENST00000577539 LINC01559Q495D7 138 aa6.2□□□□□ -1.42
VAPA-203ENST00000577539 ZBTB33Q86T24 672 aa6.2□□□□□ -1.42
VAPA-203ENST00000577539 SMARCC2Q8TAQ2 1214 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms