RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 TRIOBPQ9H2D6 2365 aa16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 CYP2B6P20813 491 aa16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 TRIM32Q13049 653 aa16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 TTF1Q15361 905 aaPredicted RBP16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 Q3C1V9 767 aa16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 AACSQ86V21 672 aa16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 CCAR1Q8IX12 1150 aaKnown RBP16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 USP6NLQ92738 828 aa16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 NBPF3Q9H094 633 aa16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 ANTXR1Q9H6X2 564 aa16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 OGDHLQ9ULD0 1010 aa16.02■□□□□ 0.16
ATP2A3-215ENST00000576957 USP17L15C9J2P7 530 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 USP17L13C9JLJ4 530 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 USP17L11C9JVI0 530 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 USP17L18D6R9N7 530 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 USP17L22D6RA61 530 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 USP17L17D6RBQ6 530 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 USP17L19D6RCP7 530 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 USP17L20D6RJB6 530 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 USP17L24Q0WX57 530 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 CERKLQ49MI3 558 aaPredicted RBP16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 GPR142Q7Z601 462 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 DIS3LQ8TF46 1054 aaKnown RBP16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 KIAA1683Q9H0B3 1180 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 EXOC6BQ9Y2D4 811 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 RABGAP1Q9Y3P9 1069 aa16.01■□□□□ 0.15
ATP2A3-215ENST00000576957 RANBP2P49792 3224 aaKnown RBP16■□□□□ 0.15
ATP2A3-215ENST00000576957 PRKAR2AP13861 404 aaKnown RBP16■□□□□ 0.15
ATP2A3-215ENST00000576957 RGS2P41220 211 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 CCNA1P78396 465 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 ABCB5Q2M3G0 1257 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 MORN1Q5T089 497 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 PLEKHH3Q7Z736 793 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 FEZ1Q99689 392 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 RIOK1Q9BRS2 568 aaKnown RBP16■□□□□ 0.15
ATP2A3-215ENST00000576957 PAGR1Q9BTK6 254 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 PORCNQ9H237 461 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 CABP5Q9NP86 173 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 NDUFB9Q9Y6M9 179 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 SZT2Q5T011 3432 aa16■□□□□ 0.15
ATP2A3-215ENST00000576957 PEX10O60683 326 aa15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 GLRX3O76003 335 aaKnown RBP15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 ZKSCAN1P17029 563 aaPredicted RBP15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 MNX1P50219 401 aaPredicted RBP15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 RAB3GAP1Q15042 981 aa15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 POTEEQ6S8J3 1075 aa15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 LBX2Q6XYB7 198 aa15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 CATSPERGQ6ZRH7 1159 aa15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 RHPN1Q8TCX5 695 aa15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 APBA2Q99767 749 aa15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 C11orf49Q9H6J7 331 aa15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 ALPK3Q96L96 1907 aa15.99■□□□□ 0.15
ATP2A3-215ENST00000576957 MAGEB6P1A0A0J9YX57 407 aa15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 BMP8BP34820 402 aa15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 SHMT1P34896 483 aa15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 PLCD1P51178 756 aa15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 CACNB2Q08289 660 aaPredicted RBP15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 BECN1Q14457 450 aa15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 RPAP2Q8IXW5 612 aaPredicted RBP15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 CLASRPQ8N2M8 674 aaKnown RBP15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 PANK1Q8TE04 598 aa15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 CRNKL1Q9BZJ0 848 aaKnown RBP15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 CWC22Q9HCG8 908 aaKnown RBP15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 STAP2Q9UGK3 403 aa15.98■□□□□ 0.15
ATP2A3-215ENST00000576957 CNMDO75829 334 aa15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 POLR3DP05423 398 aaPredicted RBP15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 VCAM1P19320 739 aa15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 GABPAQ06546 454 aa15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 MAP2K5Q13163 448 aa15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 ZYXQ15942 572 aaKnown RBP15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 SLC9C2Q5TAH2 1124 aa15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 KIF1BPQ96EK5 621 aa15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 GDF15Q99988 308 aa15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 IL1RAPL2Q9NP60 686 aa15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 DDX60LQ5H9U9 1706 aaKnown RBP15.97■□□□□ 0.15
ATP2A3-215ENST00000576957 SLC15A5A6NIM6 579 aa15.96■□□□□ 0.15
ATP2A3-215ENST00000576957 HMMRO75330 724 aa15.96■□□□□ 0.15
ATP2A3-215ENST00000576957 PDE6AP16499 860 aa15.96■□□□□ 0.15
ATP2A3-215ENST00000576957 C7orf61Q8IZ16 206 aa15.96■□□□□ 0.15
ATP2A3-215ENST00000576957 ACER1Q8TDN7 264 aa15.96■□□□□ 0.15
ATP2A3-215ENST00000576957 EDC3Q96F86 508 aaKnown RBP15.96■□□□□ 0.15
ATP2A3-215ENST00000576957 IFIT2P09913 472 aaKnown RBP15.95■□□□□ 0.14
ATP2A3-215ENST00000576957 PTPREP23469 700 aa15.95■□□□□ 0.14
ATP2A3-215ENST00000576957 GUCY1A2P33402 732 aa15.95■□□□□ 0.14
ATP2A3-215ENST00000576957 CCL14Q16627 93 aa15.95■□□□□ 0.14
ATP2A3-215ENST00000576957 LHX8Q68G74 356 aa15.95■□□□□ 0.14
ATP2A3-215ENST00000576957 UPF2Q9HAU5 1272 aaKnown RBP15.95■□□□□ 0.14
ATP2A3-215ENST00000576957 MCM9Q9NXL9 1143 aa15.95■□□□□ 0.14
ATP2A3-215ENST00000576957 ZNF532Q9HCE3 1301 aa15.94■□□□□ 0.14
ATP2A3-215ENST00000576957 TCRBV5S4A2TA0A5A2 114 aa15.94■□□□□ 0.14
ATP2A3-215ENST00000576957 RAB11FIP3O75154 756 aa15.94■□□□□ 0.14
ATP2A3-215ENST00000576957 HOXC6P09630 235 aa15.94■□□□□ 0.14
ATP2A3-215ENST00000576957 COL6A1P12109 1028 aa15.94■□□□□ 0.14
ATP2A3-215ENST00000576957 CCND3P30281 292 aaPredicted RBP15.94■□□□□ 0.14
ATP2A3-215ENST00000576957 NFKBIBQ15653 356 aa15.94■□□□□ 0.14
ATP2A3-215ENST00000576957 MFSD14CQ5VZR4 134 aa15.94■□□□□ 0.14
ATP2A3-215ENST00000576957 CHMP4BQ9H444 224 aaKnown RBP15.94■□□□□ 0.14
ATP2A3-215ENST00000576957 RWDD1Q9H446 243 aaPredicted RBP15.94■□□□□ 0.14
ATP2A3-215ENST00000576957 RPAP3Q9H6T3 665 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms