RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 MFSD14CQ5VZR4 134 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 TATDN1Q6P1N9 297 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 CATSPERGQ6ZRH7 1159 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 LPAR1Q92633 364 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 GPR108Q9NPR9 543 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 SNRKQ9NRH2 765 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 DDX20Q9UHI6 824 aaKnown RBP12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 CDH23Q9H251 3354 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 SLC15A5A6NIM6 579 aa12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 MSCO60682 206 aa12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 GH2P01242 217 aa12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 GNAI2P04899 355 aa12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 CCNA1P78396 465 aa12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 LBX2Q6XYB7 198 aa12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 ZNF512BQ96KM6 892 aaPredicted RBP12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 LBHD1Q9BQE6 289 aaPredicted RBP12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 TRIM34Q9BYJ4 488 aa12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 SAP30BPQ9UHR5 308 aaKnown RBP12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 NDUFB9Q9Y6M9 179 aa12.23□□□□□ -0.45
CALCOCO2-227ENST00000575560 DNM1LO00429 736 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 HLA-DOAP06340 250 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 DYNLL1P63167 89 aaKnown RBP12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 GRB14Q14449 540 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 TNNI3KQ59H18 835 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 CCDC158Q5M9N0 1113 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 TTC39AQ5SRH9 613 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 ATF7IPQ6VMQ6 1270 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 TRPV1Q8NER1 839 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 NPLOC4Q8TAT6 608 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 FAM161BQ96MY7 647 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 DBNDD2Q9BQY9 259 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 BTBD7Q9P203 1132 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 FPGT-TNNI3KV9GXZ4 949 aa12.22□□□□□ -0.45
CALCOCO2-227ENST00000575560 CYP2C19P33261 490 aa12.21□□□□□ -0.45
CALCOCO2-227ENST00000575560 ZAP70P43403 619 aa12.21□□□□□ -0.45
CALCOCO2-227ENST00000575560 ATN1P54259 1190 aaPredicted RBP12.21□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP14P54578 494 aa12.21□□□□□ -0.45
CALCOCO2-227ENST00000575560 ATP2B2Q01814 1243 aa12.21□□□□□ -0.45
CALCOCO2-227ENST00000575560 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
CALCOCO2-227ENST00000575560 EHD4Q9H223 541 aa12.21□□□□□ -0.45
CALCOCO2-227ENST00000575560 CWC22Q9HCG8 908 aaKnown RBP12.21□□□□□ -0.45
CALCOCO2-227ENST00000575560 PIH1D3Q9NQM4 214 aaKnown RBP12.21□□□□□ -0.45
CALCOCO2-227ENST00000575560 CYBAP13498 195 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 TRIM27P14373 513 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 VCAM1P19320 739 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 CYP7A1P22680 504 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 CNGA1P29973 690 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 RTP1P59025 263 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 POLA2Q14181 598 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 SHHQ15465 462 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 ZYXQ15942 572 aaKnown RBP12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 ACER1Q8TDN7 264 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 CDX2Q99626 313 aaPredicted RBP12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 SEMA6BQ9H3T3 888 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 SERPINB13Q9UIV8 391 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 MUC3AQ02505 3323 aa12.2□□□□□ -0.46
CALCOCO2-227ENST00000575560 CDK5RAP2Q96SN8 1893 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 FOCADQ5VW36 1801 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 SPDYE16A6NNV3 312 aaPredicted RBP12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 RAB3GAP1Q15042 981 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 CERKLQ49MI3 558 aaPredicted RBP12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 ZNF697Q5TEC3 545 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 WDR78Q5VTH9 848 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 OLFML2BQ68BL8 750 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 SLC39A5Q6ZMH5 540 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 CERS3Q8IU89 383 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 ARRDC4Q8NCT1 418 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 SSH3Q8TE77 659 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 FEZ1Q99689 392 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 PRKAG2Q9UGJ0 569 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 TNNQ9UQP3 1299 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 IVNS1ABPQ9Y6Y0 642 aa12.19□□□□□ -0.46
CALCOCO2-227ENST00000575560 MAST2Q6P0Q8 1798 aa12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 STRNO43815 780 aa12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 GUCY1A2P33402 732 aa12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 USP5P45974 858 aa12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 SNX17Q15036 470 aa12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 ABCB5Q2M3G0 1257 aa12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 C9orf50Q5SZB4 431 aa12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 GJC2Q5T442 439 aaPredicted RBP12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 MIGA1Q8NAN2 632 aa12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 RPAP3Q9H6T3 665 aaPredicted RBP12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 DBNLQ9UJU6 430 aaKnown RBP12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 ATP11BQ9Y2G3 1177 aa12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 FRMPD3Q5JV73 1810 aa12.18□□□□□ -0.46
CALCOCO2-227ENST00000575560 SEPT4O43236 478 aa12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 ADORA2AP29274 412 aa12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 SHMT1P34896 483 aa12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 PLCD1P51178 756 aa12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 SMAD3P84022 425 aaKnown RBP12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 ATP8B2P98198 1209 aa12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 COG2Q14746 738 aa12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 C1orf53Q5VUE5 145 aa12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 DPP9Q86TI2 863 aa12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 TTC6Q86TZ1 520 aa12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 MOV10L1Q9BXT6 1211 aaKnown RBP12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 CABP5Q9NP86 173 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms