RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 SSU72Q9NP77 194 aaKnown RBP7.39□□□□□ -1.23
KARSP3-201ENST00000571212 PAK6Q9NQU5 681 aaPredicted RBP7.39□□□□□ -1.23
KARSP3-201ENST00000571212 PCOLCE2Q9UKZ9 415 aa7.39□□□□□ -1.23
KARSP3-201ENST00000571212 NCOA2Q15596 1464 aa7.39□□□□□ -1.23
KARSP3-201ENST00000571212 ARHGEF5Q12774 1597 aa7.38□□□□□ -1.23
KARSP3-201ENST00000571212 UGGT1Q9NYU2 1555 aa7.38□□□□□ -1.23
KARSP3-201ENST00000571212 DCDC2CA8MYV0 355 aa7.38□□□□□ -1.23
KARSP3-201ENST00000571212 BNIP3Q12983 259 aa7.38□□□□□ -1.23
KARSP3-201ENST00000571212 CYP27C1Q4G0S4 372 aa7.38□□□□□ -1.23
KARSP3-201ENST00000571212 UBE3DQ7Z6J8 389 aa7.38□□□□□ -1.23
KARSP3-201ENST00000571212 FBXL18Q96ME1 805 aa7.38□□□□□ -1.23
KARSP3-201ENST00000571212 CACNA2D2Q9NY47 1150 aa7.38□□□□□ -1.23
KARSP3-201ENST00000571212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.38□□□□□ -1.23
KARSP3-201ENST00000571212 IQGAP1P46940 1657 aa7.38□□□□□ -1.23
KARSP3-201ENST00000571212 ZC3H13Q5T200 1668 aaKnown RBP7.38□□□□□ -1.23
KARSP3-201ENST00000571212 NPHP4O75161 1426 aaPredicted RBP7.38□□□□□ -1.23
KARSP3-201ENST00000571212 MAP3K1Q13233 1512 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 CELA3AP09093 270 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 TSPY4P0CV99 314 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 TSPY10P0CW01 314 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 ALG1LQ6GMV1 187 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 SPRED2Q7Z698 418 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 C12orf40Q86WS4 652 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 WFDC3Q8IUB2 231 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.37□□□□□ -1.23
KARSP3-201ENST00000571212 BCL7CQ8WUZ0 217 aaPredicted RBP7.37□□□□□ -1.23
KARSP3-201ENST00000571212 DUSP23Q9BVJ7 150 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 RNF19AQ9NV58 838 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 RNF17Q9BXT8 1623 aaKnown RBP7.37□□□□□ -1.23
KARSP3-201ENST00000571212 CFAP65Q6ZU64 1925 aaKnown RBP7.37□□□□□ -1.23
KARSP3-201ENST00000571212 ERVK-24P63145 666 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 TOP6BLQ8N6T0 577 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 RNF214Q8ND24 703 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 CEP44Q9C0F1 390 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 RNF114Q9Y508 228 aa7.37□□□□□ -1.23
KARSP3-201ENST00000571212 MAST1Q9Y2H9 1570 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 EIF2AK4Q9P2K8 1649 aaKnown RBP7.36□□□□□ -1.23
KARSP3-201ENST00000571212 ALKQ9UM73 1620 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 LDHBP07195 334 aaKnown RBP7.36□□□□□ -1.23
KARSP3-201ENST00000571212 USP17L7P0C7H9 530 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 CD96P40200 585 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 ATP2B2Q01814 1243 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 CBLL1Q75N03 491 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 FMNL2Q96PY5 1086 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 TRAIPQ9BWF2 469 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 SRCIN1Q9C0H9 1055 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 C12orf49Q9H741 205 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 STRCP1A6NGW2 1772 aa7.36□□□□□ -1.23
KARSP3-201ENST00000571212 ABCC3O15438 1527 aa7.35□□□□□ -1.23
KARSP3-201ENST00000571212 SYNMO15061 1565 aa7.35□□□□□ -1.23
KARSP3-201ENST00000571212 NTF4P34130 210 aa7.35□□□□□ -1.23
KARSP3-201ENST00000571212 HNRNPUQ00839 825 aaKnown RBP eCLIP7.35□□□□□ -1.23
KARSP3-201ENST00000571212 PTPN11Q06124 597 aaPredicted RBP7.35□□□□□ -1.23
KARSP3-201ENST00000571212 PPM1HQ9ULR3 514 aa7.35□□□□□ -1.23
KARSP3-201ENST00000571212 PCDHA4Q9UN74 947 aa7.35□□□□□ -1.23
KARSP3-201ENST00000571212 SPG7Q9UQ90 795 aa7.35□□□□□ -1.23
KARSP3-201ENST00000571212 SLC5A6Q9Y289 635 aa7.35□□□□□ -1.23
KARSP3-201ENST00000571212 ERVK-7P63135 1459 aa7.34□□□□□ -1.23
KARSP3-201ENST00000571212 LCE3BQ5TA77 95 aa7.34□□□□□ -1.23
KARSP3-201ENST00000571212 LLGL2Q6P1M3 1020 aa7.34□□□□□ -1.23
KARSP3-201ENST00000571212 LRRC7Q96NW7 1537 aa7.34□□□□□ -1.23
KARSP3-201ENST00000571212 CEP152O94986 1710 aa7.34□□□□□ -1.24
KARSP3-201ENST00000571212 UBR1Q8IWV7 1749 aa7.34□□□□□ -1.24
KARSP3-201ENST00000571212 MROH1Q8NDA8 1641 aa7.33□□□□□ -1.24
KARSP3-201ENST00000571212 GIPC1O14908 333 aa7.33□□□□□ -1.24
KARSP3-201ENST00000571212 TRIM37O94972 964 aa7.33□□□□□ -1.24
KARSP3-201ENST00000571212 PCNX4Q63HM2 1172 aa7.33□□□□□ -1.24
KARSP3-201ENST00000571212 NETO1Q8TDF5 533 aa7.33□□□□□ -1.24
KARSP3-201ENST00000571212 HEXIM2Q96MH2 286 aaKnown RBP7.33□□□□□ -1.24
KARSP3-201ENST00000571212 PICK1Q9NRD5 415 aa7.33□□□□□ -1.24
KARSP3-201ENST00000571212 FAM8A1Q9UBU6 413 aa7.33□□□□□ -1.24
KARSP3-201ENST00000571212 PLAGL2Q9UPG8 496 aa7.33□□□□□ -1.24
KARSP3-201ENST00000571212 SAMM50Q9Y512 469 aa7.33□□□□□ -1.24
KARSP3-201ENST00000571212 RBAK-RBAKDNI3L0D1 243 aa7.32□□□□□ -1.24
KARSP3-201ENST00000571212 CD8BP10966 210 aa7.32□□□□□ -1.24
KARSP3-201ENST00000571212 OXCT1P55809 520 aa7.32□□□□□ -1.24
KARSP3-201ENST00000571212 RING1Q06587 406 aa7.32□□□□□ -1.24
KARSP3-201ENST00000571212 INPP5AQ14642 412 aa7.32□□□□□ -1.24
KARSP3-201ENST00000571212 GOLGA2P5Q9HBQ8 144 aa7.32□□□□□ -1.24
KARSP3-201ENST00000571212 LRRC9Q6ZRR7 1453 aa7.32□□□□□ -1.24
KARSP3-201ENST00000571212 CDK8P49336 464 aa7.32□□□□□ -1.24
KARSP3-201ENST00000571212 AGBL5Q8NDL9 886 aa7.32□□□□□ -1.24
KARSP3-201ENST00000571212 TTF2Q9UNY4 1162 aaKnown RBP7.32□□□□□ -1.24
KARSP3-201ENST00000571212 SCAF11Q99590 1463 aaKnown RBP7.31□□□□□ -1.24
KARSP3-201ENST00000571212 ARHGAP23Q9P227 1491 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 XIRP1Q702N8 1843 aaKnown RBP7.31□□□□□ -1.24
KARSP3-201ENST00000571212 SLIT1O75093 1534 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 DUOX2Q9NRD8 1548 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 ARHGAP31Q2M1Z3 1444 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 ITIH2P19823 946 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 TXKP42681 527 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 LRRC14Q15048 493 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 PLCL1Q15111 1095 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 ZBTB37Q5TC79 503 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 LRFN4Q6PJG9 635 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.31□□□□□ -1.24
KARSP3-201ENST00000571212 FAM214BQ7L5A3 538 aa7.31□□□□□ -1.24
KARSP3-201ENST00000571212 MYOM3Q5VTT5 1437 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms