RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 TRIM43Q96BQ3 446 aaPredicted RBP10.69□□□□□ -0.7
SMG1-216ENST00000569122 NSUN4Q96CB9 384 aaKnown RBP10.69□□□□□ -0.7
SMG1-216ENST00000569122 FEZ1Q99689 392 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 FLRT1Q9NZU1 646 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 RAI14Q9P0K7 980 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 HCN4Q9Y3Q4 1203 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 DNAH12Q6ZR08 3092 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 KIAA0355O15063 1070 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 MYCNP04198 464 aaPredicted RBP10.68□□□□□ -0.7
SMG1-216ENST00000569122 UBTFL1P0CB47 393 aaPredicted RBP10.68□□□□□ -0.7
SMG1-216ENST00000569122 ADCYAP1R1P41586 468 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 TLE2Q04725 743 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 AAK1Q2M2I8 961 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 GORABQ5T7V8 394 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 CATSPERGQ6ZRH7 1159 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 RNF180Q86T96 592 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 HOXC10Q9NYD6 342 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 LRP2BPQ9P2M1 347 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 NRBP1Q9UHY1 535 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 ZBTB21Q9ULJ3 1066 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 SALL2Q9Y467 1007 aaPredicted RBP10.68□□□□□ -0.7
SMG1-216ENST00000569122 DOCK3Q8IZD9 2030 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 DOCK1Q14185 1865 aa10.68□□□□□ -0.7
SMG1-216ENST00000569122 DCDC2CA8MYV0 355 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 PEX10O60683 326 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 ADORA1P30542 326 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 TIMM10P62072 90 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 LRRC41Q15345 812 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 CERS3Q8IU89 383 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 USP38Q8NB14 1042 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 SPATA5Q8NB90 893 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 NPLOC4Q8TAT6 608 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 PPM1EQ8WY54 764 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 XAGE2Q96GT9 111 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 TOX2Q96NM4 488 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 COPRSQ9NQ92 184 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 TMEM39AQ9NV64 488 aa10.67□□□□□ -0.7
SMG1-216ENST00000569122 SYNGAP1Q96PV0 1343 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 CDH23Q9H251 3354 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 A0A1B0GUL7 405 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 CNMDO75829 334 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 IGHA2P01877 340 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 UQCRFS1P1P0C7P4 283 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 RARBP10826 455 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 ADORA2AP29274 412 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 PPP4CP60510 307 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 CCDC129Q6ZRS4 1044 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 SH3RF1Q7Z6J0 888 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 ABRAQ8N0Z2 381 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 MRPL50Q8N5N7 158 aaKnown RBP10.66□□□□□ -0.7
SMG1-216ENST00000569122 SHCBP1Q8NEM2 672 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 TRPV1Q8NER1 839 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 NUP133Q8WUM0 1156 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 FERMT2Q96AC1 680 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 KIAA1683Q9H0B3 1180 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 MTIF3Q9H2K0 278 aaKnown RBP10.66□□□□□ -0.7
SMG1-216ENST00000569122 CABP5Q9NP86 173 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 RAPGEFL1Q9UHV5 662 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 PHF24Q9UPV7 400 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 NDUFB9Q9Y6M9 179 aa10.66□□□□□ -0.7
SMG1-216ENST00000569122 DOCK2Q92608 1830 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 GDF11O95390 407 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 PPIGQ13427 754 aaKnown RBP eCLIP10.65□□□□□ -0.76e-20■□□□□ 11.2
SMG1-216ENST00000569122 COG2Q14746 738 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 RAB30Q15771 203 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 NAA16Q6N069 864 aaPredicted RBP10.65□□□□□ -0.7
SMG1-216ENST00000569122 MB21D1Q8N884 522 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 SLC44A5Q8NCS7 719 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 SH3RF3Q8TEJ3 882 aaPredicted RBP10.65□□□□□ -0.7
SMG1-216ENST00000569122 ZNF384Q8TF68 577 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 TGFBRAP1Q8WUH2 860 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 NEUROD6Q96NK8 337 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 TSEN34Q9BSV6 310 aaKnown RBP10.65□□□□□ -0.7
SMG1-216ENST00000569122 MROH8Q9H579 483 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 XPNPEP3Q9NQH7 507 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 HMG20BQ9P0W2 317 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 MSRAQ9UJ68 235 aa10.65□□□□□ -0.7
SMG1-216ENST00000569122 LOC285556D6RIA3 1793 aa10.65□□□□□ -0.71
SMG1-216ENST00000569122 MROH7Q68CQ1 1323 aa10.64□□□□□ -0.71
SMG1-216ENST00000569122 PQBP1O60828 265 aaKnown RBP10.64□□□□□ -0.71
SMG1-216ENST00000569122 TIMP1P01033 207 aa10.64□□□□□ -0.71
SMG1-216ENST00000569122 GH2P01242 217 aa10.64□□□□□ -0.71
SMG1-216ENST00000569122 VCAM1P19320 739 aa10.64□□□□□ -0.71
SMG1-216ENST00000569122 POTEEQ6S8J3 1075 aa10.64□□□□□ -0.71
SMG1-216ENST00000569122 ANKRD33Q7Z3H0 272 aa10.64□□□□□ -0.71
SMG1-216ENST00000569122 MAPKAPK5Q8IW41 473 aa10.64□□□□□ -0.71
SMG1-216ENST00000569122 AATFQ9NY61 560 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMG1-216ENST00000569122 CXXC1Q9P0U4 656 aaPredicted RBP10.64□□□□□ -0.71
SMG1-216ENST00000569122 BTBD7Q9P203 1132 aa10.64□□□□□ -0.71
SMG1-216ENST00000569122 PTPRFP10586 1907 aa10.64□□□□□ -0.71
SMG1-216ENST00000569122 PHIPQ8WWQ0 1821 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 FLT1P17948 1338 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 SPDYE16A6NNV3 312 aaPredicted RBP10.63□□□□□ -0.71
SMG1-216ENST00000569122 IGFBP4P22692 258 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 ARID4AP29374 1257 aaPredicted RBP10.63□□□□□ -0.71
SMG1-216ENST00000569122 EPHB4P54760 987 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 RAB3GAP1Q15042 981 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
SMG1-216ENST00000569122 CERKLQ49MI3 558 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms