RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 HOXA7P31268 230 aaPredicted RBP22.35■■□□□ 1.17
PKD1-223ENST00000561668 TDO2P48775 406 aa22.35■■□□□ 1.17
PKD1-223ENST00000561668 CDK8P49336 464 aa22.35■■□□□ 1.17
PKD1-223ENST00000561668 SEPT2Q15019 361 aa22.35■■□□□ 1.17
PKD1-223ENST00000561668 ZYXQ15942 572 aaKnown RBP22.35■■□□□ 1.17
PKD1-223ENST00000561668 TMEM179Q6ZVK1 233 aa22.35■■□□□ 1.17
PKD1-223ENST00000561668 ANKRD13CQ8N6S4 541 aa22.35■■□□□ 1.17
PKD1-223ENST00000561668 CYP2D7A0A087X1C5 515 aa22.34■■□□□ 1.17
PKD1-223ENST00000561668 M0R2C6 588 aa22.34■■□□□ 1.17
PKD1-223ENST00000561668 EVX2Q03828 476 aa22.34■■□□□ 1.17
PKD1-223ENST00000561668 SBK1Q52WX2 424 aa22.34■■□□□ 1.17
PKD1-223ENST00000561668 TTC22Q5TAA0 569 aa22.34■■□□□ 1.17
PKD1-223ENST00000561668 SLC44A5Q8NCS7 719 aa22.34■■□□□ 1.17
PKD1-223ENST00000561668 EMILIN3Q9NT22 766 aa22.34■■□□□ 1.17
PKD1-223ENST00000561668 GSPT1P15170 499 aaKnown RBP22.33■■□□□ 1.17
PKD1-223ENST00000561668 CAP1Q01518 475 aa22.33■■□□□ 1.17
PKD1-223ENST00000561668 SLC9C1Q4G0N8 1177 aa22.33■■□□□ 1.17
PKD1-223ENST00000561668 C16orf86Q6ZW13 317 aa22.33■■□□□ 1.17
PKD1-223ENST00000561668 CCDC136Q96JN2 1154 aa22.33■■□□□ 1.17
PKD1-223ENST00000561668 TRIM47Q96LD4 638 aa22.33■■□□□ 1.17
PKD1-223ENST00000561668 KIAA1683Q9H0B3 1180 aa22.33■■□□□ 1.17
PKD1-223ENST00000561668 MKNK2Q9HBH9 465 aa22.33■■□□□ 1.17
PKD1-223ENST00000561668 ZNF287Q9HBT7 754 aa22.33■■□□□ 1.17
PKD1-223ENST00000561668 HELLSQ9NRZ9 838 aa22.33■■□□□ 1.17
PKD1-223ENST00000561668 BAZ2AQ9UIF9 1905 aaKnown RBP22.32■■□□□ 1.16
PKD1-223ENST00000561668 SOX10P56693 466 aa22.32■■□□□ 1.16
PKD1-223ENST00000561668 IFNL3Q8IZI9 196 aa22.32■■□□□ 1.16
PKD1-223ENST00000561668 RAET1EQ8TD07 263 aa22.32■■□□□ 1.16
PKD1-223ENST00000561668 RILPL2Q969X0 211 aa22.32■■□□□ 1.16
PKD1-223ENST00000561668 SEC62Q99442 399 aaKnown RBP22.32■■□□□ 1.16
PKD1-223ENST00000561668 ARHGEF10LQ9HCE6 1279 aa22.32■■□□□ 1.16
PKD1-223ENST00000561668 SRRDQ9UH36 339 aa22.32■■□□□ 1.16
PKD1-223ENST00000561668 PTCH2Q9Y6C5 1203 aa22.32■■□□□ 1.16
PKD1-223ENST00000561668 USP17L15C9J2P7 530 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 USP17L13C9JLJ4 530 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 USP17L11C9JVI0 530 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 USP17L18D6R9N7 530 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 USP17L22D6RA61 530 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 USP17L17D6RBQ6 530 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 USP17L19D6RCP7 530 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 USP17L20D6RJB6 530 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 USP17L24Q0WX57 530 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 FAM110CQ1W6H9 321 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 ACER1Q8TDN7 264 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 COA7Q96BR5 231 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 C12orf42Q96LP6 360 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 P2RX7Q99572 595 aaKnown RBP22.31■■□□□ 1.16
PKD1-223ENST00000561668 SH2D4AQ9H788 454 aa22.31■■□□□ 1.16
PKD1-223ENST00000561668 TNPO2O14787 897 aaKnown RBP22.3■■□□□ 1.16
PKD1-223ENST00000561668 SLC3A2P08195 630 aaKnown RBP22.3■■□□□ 1.16
PKD1-223ENST00000561668 AKR1B1P15121 316 aa22.3■■□□□ 1.16
PKD1-223ENST00000561668 SDSP20132 328 aa22.3■■□□□ 1.16
PKD1-223ENST00000561668 GUCY1A2P33402 732 aa22.3■■□□□ 1.16
PKD1-223ENST00000561668 RGS19P49795 217 aa22.3■■□□□ 1.16
PKD1-223ENST00000561668 MLLT1Q03111 559 aaPredicted RBP22.3■■□□□ 1.16
PKD1-223ENST00000561668 CCAR1Q8IX12 1150 aaKnown RBP22.3■■□□□ 1.16
PKD1-223ENST00000561668 STK11IPQ8N1F8 1099 aa22.3■■□□□ 1.16
PKD1-223ENST00000561668 GTF3C2Q8WUA4 911 aaPredicted RBP22.3■■□□□ 1.16
PKD1-223ENST00000561668 NAPBQ9H115 298 aa22.3■■□□□ 1.16
PKD1-223ENST00000561668 PPP4R2Q9NY27 417 aa22.3■■□□□ 1.16
PKD1-223ENST00000561668 LOC285556D6RIA3 1793 aa22.3■■□□□ 1.16
PKD1-223ENST00000561668 MYPNQ86TC9 1320 aa22.3■■□□□ 1.16
PKD1-223ENST00000561668 CTGFP29279 349 aa22.29■■□□□ 1.16
PKD1-223ENST00000561668 HERVK_113P62684 666 aa22.29■■□□□ 1.16
PKD1-223ENST00000561668 ZNF444Q8N0Y2 327 aaPredicted RBP22.29■■□□□ 1.16
PKD1-223ENST00000561668 KANSL2Q9H9L4 492 aa22.29■■□□□ 1.16
PKD1-223ENST00000561668 FOXP2O15409 715 aa22.28■■□□□ 1.16
PKD1-223ENST00000561668 ATP2B2Q01814 1243 aa22.28■■□□□ 1.16
PKD1-223ENST00000561668 ICA1Q05084 483 aa22.28■■□□□ 1.16
PKD1-223ENST00000561668 MCMDC2Q4G0Z9 681 aa22.28■■□□□ 1.16
PKD1-223ENST00000561668 GPRC5AQ8NFJ5 357 aa22.28■■□□□ 1.16
PKD1-223ENST00000561668 ARMC5Q96C12 935 aa22.28■■□□□ 1.16
PKD1-223ENST00000561668 TMEM106CQ9BVX2 250 aa22.28■■□□□ 1.16
PKD1-223ENST00000561668 A0A0D9SFI3 127 aa22.27■■□□□ 1.16
PKD1-223ENST00000561668 SMIM22K7EJ46 135 aa22.27■■□□□ 1.16
PKD1-223ENST00000561668 HIP1O00291 1037 aa22.27■■□□□ 1.16
PKD1-223ENST00000561668 CATSPERGQ6ZRH7 1159 aa22.27■■□□□ 1.16
PKD1-223ENST00000561668 FAM227BQ96M60 508 aa22.27■■□□□ 1.16
PKD1-223ENST00000561668 EPB41L4AQ9HCS5 686 aaPredicted RBP22.27■■□□□ 1.16
PKD1-223ENST00000561668 BIN2Q9UBW5 565 aaPredicted RBP22.27■■□□□ 1.16
PKD1-223ENST00000561668 MYH8P13535 1937 aa22.27■■□□□ 1.16
PKD1-223ENST00000561668 VCAM1P19320 739 aa22.26■■□□□ 1.15
PKD1-223ENST00000561668 PDE4BQ07343 736 aa22.26■■□□□ 1.15
PKD1-223ENST00000561668 NMIQ13287 307 aaPredicted RBP22.26■■□□□ 1.15
PKD1-223ENST00000561668 RPAP3Q9H6T3 665 aaPredicted RBP22.26■■□□□ 1.15
PKD1-223ENST00000561668 A0A1W2PRG0 241 aa22.25■■□□□ 1.15
PKD1-223ENST00000561668 PRKCZQ05513 592 aa22.25■■□□□ 1.15
PKD1-223ENST00000561668 ALX1Q15699 326 aa22.25■■□□□ 1.15
PKD1-223ENST00000561668 LPAR1Q92633 364 aa22.25■■□□□ 1.15
PKD1-223ENST00000561668 PAGR1Q9BTK6 254 aa22.25■■□□□ 1.15
PKD1-223ENST00000561668 HOXC10Q9NYD6 342 aa22.25■■□□□ 1.15
PKD1-223ENST00000561668 MORF4L1Q9UBU8 362 aa22.25■■□□□ 1.15
PKD1-223ENST00000561668 TMX2Q9Y320 296 aa22.25■■□□□ 1.15
PKD1-223ENST00000561668 EEF2P13639 858 aaKnown RBP22.24■■□□□ 1.15
PKD1-223ENST00000561668 GRK4P32298 578 aa22.24■■□□□ 1.15
PKD1-223ENST00000561668 MFAP1P55081 439 aaKnown RBP22.24■■□□□ 1.15
PKD1-223ENST00000561668 CCDC129Q6ZRS4 1044 aa22.24■■□□□ 1.15
PKD1-223ENST00000561668 SH3TC2Q8TF17 1288 aa22.24■■□□□ 1.15
PKD1-223ENST00000561668 TANGO6Q9C0B7 1094 aa22.24■■□□□ 1.15
PKD1-223ENST00000561668 CWC22Q9HCG8 908 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms