RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 OSBPP22059 807 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 HOXA7P31268 230 aaPredicted RBP8.34□□□□□ -1.07
SPG11-224ENST00000561268 ADD2P35612 726 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 IRF5Q13568 498 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 SHROOM1Q2M3G4 852 aaPredicted RBP8.34□□□□□ -1.07
SPG11-224ENST00000561268 CENPQQ7L2Z9 268 aaPredicted RBP8.34□□□□□ -1.07
SPG11-224ENST00000561268 SHISA4Q96DD7 197 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 DDRGK1Q96HY6 314 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 HAUS7Q99871 368 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 BACH2Q9BYV9 841 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 OCEL1Q9H607 264 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 MORF4L1Q9UBU8 362 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 PNMA3Q9UL41 463 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 PALD1Q9ULE6 856 aa8.34□□□□□ -1.07
SPG11-224ENST00000561268 MYPNQ86TC9 1320 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 ZNF532Q9HCE3 1301 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 MYH6P13533 1939 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 HLA-DOAP06340 250 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 PRKCSHP14314 528 aaPredicted RBP8.33□□□□□ -1.08
SPG11-224ENST00000561268 SHMT1P34896 483 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 PSMC4P43686 418 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 GCLCP48506 637 aaPredicted RBP8.33□□□□□ -1.08
SPG11-224ENST00000561268 HMGCS2P54868 508 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 BACE1P56817 501 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 SPP2Q13103 211 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 KIF22Q14807 665 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 SLC9C1Q4G0N8 1177 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 PRPF38BQ5VTL8 546 aaKnown RBP8.33□□□□□ -1.08
SPG11-224ENST00000561268 GADL1Q6ZQY3 521 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 UBE2Q1Q7Z7E8 422 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 MIGA1Q8NAN2 632 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 EDC3Q96F86 508 aaKnown RBP8.33□□□□□ -1.08
SPG11-224ENST00000561268 LRRCC1Q9C099 1032 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 DCTPP1Q9H773 170 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 AS3MTQ9HBK9 375 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 DCP1AQ9NPI6 582 aaPredicted RBP8.33□□□□□ -1.08
SPG11-224ENST00000561268 PAG1Q9NWQ8 432 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 SERPINB13Q9UIV8 391 aa8.33□□□□□ -1.08
SPG11-224ENST00000561268 C19orf81C9J6K1 198 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 GOLIM4O00461 696 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 IFIT2P09913 472 aaKnown RBP8.32□□□□□ -1.08
SPG11-224ENST00000561268 GUCY1A2P33402 732 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 FCGRTP55899 365 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 PRKCZQ05513 592 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 MTMR2Q13614 643 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 UBE3CQ15386 1083 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 POTEEQ6S8J3 1075 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 LBX2Q6XYB7 198 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 LCORLQ8N3X6 602 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 PXYLP1Q8TE99 480 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 KIAA1683Q9H0B3 1180 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 ASCC2Q9H1I8 757 aaPredicted RBP8.32□□□□□ -1.08
SPG11-224ENST00000561268 SMCHD1A6NHR9 2005 aa8.32□□□□□ -1.08
SPG11-224ENST00000561268 MAGEB6P1A0A0J9YX57 407 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 GDF11O95390 407 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 SLC34A2O95436 690 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 PYGBP11216 843 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 GRK4P32298 578 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 PLCD1P51178 756 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 PABPC4Q13310 644 aaKnown RBP eCLIP8.31□□□□□ -1.08
SPG11-224ENST00000561268 SLC9C2Q5TAH2 1124 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 NBPF11Q86T75 865 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 TTC6Q86TZ1 520 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 SMCR8Q8TEV9 937 aaPredicted RBP8.31□□□□□ -1.08
SPG11-224ENST00000561268 GTF3C2Q8WUA4 911 aaPredicted RBP8.31□□□□□ -1.08
SPG11-224ENST00000561268 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
SPG11-224ENST00000561268 CRNKL1Q9BZJ0 848 aaKnown RBP8.31□□□□□ -1.08
SPG11-224ENST00000561268 SAP30BPQ9UHR5 308 aaKnown RBP8.31□□□□□ -1.08
SPG11-224ENST00000561268 GABRQQ9UN88 632 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 PLIN4Q96Q06 1357 aa8.31□□□□□ -1.08
SPG11-224ENST00000561268 USP17L10C9JJH3 530 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 GH2P01242 217 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 PDE4AP27815 886 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 HOXD10P28358 340 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 USP5P45974 858 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 EMP3P54852 163 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 HERVK_113P62684 666 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 CRACR2BQ8N4Y2 399 aaPredicted RBP8.3□□□□□ -1.08
SPG11-224ENST00000561268 KBTBD3Q8NAB2 608 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 PI4K2BQ8TCG2 481 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 SH3TC2Q8TF17 1288 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 SDR42E1Q8WUS8 393 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 BOLA2Q9H3K6 86 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 PAK6Q9NQU5 681 aaPredicted RBP8.3□□□□□ -1.08
SPG11-224ENST00000561268 EMILIN3Q9NT22 766 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 ATP8A2Q9NTI2 1148 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 GJD2Q9UKL4 321 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 PCDHB15Q9Y5E8 787 aa8.3□□□□□ -1.08
SPG11-224ENST00000561268 TTC41PQ6P2S7 1318 aa8.29□□□□□ -1.08
SPG11-224ENST00000561268 MBD4O95243 580 aa8.29□□□□□ -1.08
SPG11-224ENST00000561268 IGHA2P01877 340 aa8.29□□□□□ -1.08
SPG11-224ENST00000561268 CHGBP05060 677 aa8.29□□□□□ -1.08
SPG11-224ENST00000561268 GJB1P08034 283 aa8.29□□□□□ -1.08
SPG11-224ENST00000561268 CAPN2P17655 700 aa8.29□□□□□ -1.08
SPG11-224ENST00000561268 VCAM1P19320 739 aa8.29□□□□□ -1.08
SPG11-224ENST00000561268 EN2P19622 333 aaPredicted RBP8.29□□□□□ -1.08
SPG11-224ENST00000561268 GJA8P48165 433 aa8.29□□□□□ -1.08
SPG11-224ENST00000561268 FLT3LGP49771 235 aa8.29□□□□□ -1.08
SPG11-224ENST00000561268 MTFR1Q15390 333 aa8.29□□□□□ -1.08
SPG11-224ENST00000561268 C12orf60Q5U649 245 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms