RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 SLC12A7Q9Y666 1083 aa5.22□□□□□ -1.57
SRP54-209ENST00000555746 SMAD7O15105 426 aaKnown RBP5.21□□□□□ -1.58
SRP54-209ENST00000555746 SLITRK5O94991 958 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 RUFY4Q6ZNE9 571 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 ANKS3Q6ZW76 656 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 CKAP2LQ8IYA6 745 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 GIMAP7Q8NHV1 300 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 PPP1R13LQ8WUF5 828 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 SLC9A7Q96T83 725 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 SPOCK3Q9BQ16 436 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 DPH2Q9BQC3 489 aaPredicted RBP5.21□□□□□ -1.58
SRP54-209ENST00000555746 PRDM10Q9NQV6 1147 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 STOML1Q9UBI4 398 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 PPP1R1BQ9UD71 204 aaPredicted RBP5.21□□□□□ -1.58
SRP54-209ENST00000555746 HECW2Q9P2P5 1572 aa5.21□□□□□ -1.58
SRP54-209ENST00000555746 COL17A1Q9UMD9 1497 aaPredicted RBP5.2□□□□□ -1.58
SRP54-209ENST00000555746 A0A1W2PQH9 124 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 HMX2A2RU54 273 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 UBOX5O94941 541 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 IGHA1P01876 353 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 CDK5R2Q13319 367 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 RAB33AQ14088 237 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 NKAPLQ5M9Q1 402 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 RNF43Q68DV7 783 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 UNC5AQ6ZN44 842 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 ZAR1Q86SH2 424 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 TTC6Q86TZ1 520 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 SLC51AQ86UW1 340 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 DNAJB8Q8NHS0 232 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 KIF2CQ99661 725 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 DUSP23Q9BVJ7 150 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 ACTR10Q9NZ32 417 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 CEP131Q9UPN4 1083 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 SMARCA2P51531 1590 aa5.2□□□□□ -1.58
SRP54-209ENST00000555746 MSTNO14793 375 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 GSC2O15499 205 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 EOMESO95936 686 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 ADMP35318 185 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 SERINC3Q13530 473 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 DOC2BQ14184 412 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 ZYXQ15942 572 aaKnown RBP5.19□□□□□ -1.58
SRP54-209ENST00000555746 RSPO4Q2I0M5 234 aaPredicted RBP5.19□□□□□ -1.58
SRP54-209ENST00000555746 LETMD1Q6P1Q0 360 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 OGFOD3Q6PK18 319 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 FAM214BQ7L5A3 538 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 PHACTR4Q8IZ21 702 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 BAHD1Q8TBE0 780 aaPredicted RBP5.19□□□□□ -1.58
SRP54-209ENST00000555746 HNRNPLLQ8WVV9 542 aaKnown RBP5.19□□□□□ -1.58
SRP54-209ENST00000555746 DNAJC2Q99543 621 aaKnown RBP5.19□□□□□ -1.58
SRP54-209ENST00000555746 MIPEPQ99797 713 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.19□□□□□ -1.58
SRP54-209ENST00000555746 TNKS2Q9H2K2 1166 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 LGR6Q9HBX8 967 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 LTBP3Q9NS15 1303 aa5.19□□□□□ -1.58
SRP54-209ENST00000555746 KIF21AQ7Z4S6 1674 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 POLR2BP30876 1174 aaKnown RBP5.18□□□□□ -1.58
SRP54-209ENST00000555746 GBP1P32455 592 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 ETV3P41162 512 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 NFIAQ12857 509 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 CPSF6Q16630 551 aaKnown RBP eCLIP5.18□□□□□ -1.58
SRP54-209ENST00000555746 ZNF746Q6NUN9 644 aaPredicted RBP5.18□□□□□ -1.58
SRP54-209ENST00000555746 TOP6BLQ8N6T0 577 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 RIN3Q8TB24 985 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 XAGE3Q8WTP9 111 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 VWCEQ96DN2 955 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 COX4I2Q96KJ9 171 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 DHRS1Q96LJ7 313 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 TBC1D32Q96NH3 1257 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 DBNDD2Q9BQY9 259 aa5.18□□□□□ -1.58
SRP54-209ENST00000555746 PHAXQ9H814 394 aaKnown RBP5.18□□□□□ -1.58
SRP54-209ENST00000555746 IGF2BP3O00425 579 aaKnown RBP eCLIP5.17□□□□□ -1.58
SRP54-209ENST00000555746 LEFTY1O75610 366 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 IGLV1-40P01703 118 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 F13BP05160 661 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 FAM87AP0C7U9 286 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 PMS1P54277 932 aaKnown RBP5.17□□□□□ -1.58
SRP54-209ENST00000555746 CYP27A1Q02318 531 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 PPP2R5EQ16537 467 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 FXNQ16595 210 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 C22orf34Q6ZV56 151 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 TMEM192Q8IY95 271 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 SMARCC1Q92922 1105 aaPredicted RBP5.17□□□□□ -1.58
SRP54-209ENST00000555746 MKL1Q969V6 931 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 FBXL18Q96ME1 805 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 SLC6A18Q96N87 628 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 LNPKQ9C0E8 428 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 SIRPGQ9P1W8 387 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 SUCOQ9UBS9 1254 aaKnown RBP5.17□□□□□ -1.58
SRP54-209ENST00000555746 ZNF214Q9UL59 606 aaPredicted RBP5.17□□□□□ -1.58
SRP54-209ENST00000555746 MAPK8IP1Q9UQF2 711 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 MSRB2Q9Y3D2 182 aa5.17□□□□□ -1.58
SRP54-209ENST00000555746 R3HCC1Q9Y3T6 440 aaKnown RBP5.17□□□□□ -1.58
SRP54-209ENST00000555746 DYRK3O43781 588 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 CLEC3AO75596 197 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 FSTP19883 344 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 DDR2Q16832 855 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 BBS9Q3SYG4 887 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 CYP27C1Q4G0S4 372 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 DPH6Q7L8W6 267 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 CDH24Q86UP0 819 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms