RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 COL2A1P02458 1487 aaPredicted RBP13.68□□□□□ -0.22
TMEM116-218ENST00000552839 CDK5RAP2Q96SN8 1893 aa13.68□□□□□ -0.22
TMEM116-218ENST00000552839 COL6A1P12109 1028 aa13.68□□□□□ -0.22
TMEM116-218ENST00000552839 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
TMEM116-218ENST00000552839 PDE4AP27815 886 aa13.68□□□□□ -0.22
TMEM116-218ENST00000552839 GSTO1P78417 241 aa13.68□□□□□ -0.22
TMEM116-218ENST00000552839 P2RX7Q99572 595 aaKnown RBP13.68□□□□□ -0.22
TMEM116-218ENST00000552839 NUDT12Q9BQG2 462 aa13.68□□□□□ -0.22
TMEM116-218ENST00000552839 TXNRD2Q9NNW7 524 aa13.68□□□□□ -0.22
TMEM116-218ENST00000552839 MAST2Q6P0Q8 1798 aa13.68□□□□□ -0.22
TMEM116-218ENST00000552839 XRCC5P13010 732 aaKnown RBP13.67□□□□□ -0.22
TMEM116-218ENST00000552839 HOXA7P31268 230 aaPredicted RBP13.67□□□□□ -0.22
TMEM116-218ENST00000552839 IRX3P78415 501 aaPredicted RBP13.67□□□□□ -0.22
TMEM116-218ENST00000552839 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
TMEM116-218ENST00000552839 MTMR2Q13614 643 aa13.67□□□□□ -0.22
TMEM116-218ENST00000552839 LRRC26Q2I0M4 334 aa13.67□□□□□ -0.22
TMEM116-218ENST00000552839 TTC22Q5TAA0 569 aa13.67□□□□□ -0.22
TMEM116-218ENST00000552839 TBC1D9Q6ZT07 1266 aa13.67□□□□□ -0.22
TMEM116-218ENST00000552839 PI4K2BQ8TCG2 481 aa13.67□□□□□ -0.22
TMEM116-218ENST00000552839 NSUN4Q96CB9 384 aaKnown RBP13.67□□□□□ -0.22
TMEM116-218ENST00000552839 AS3MTQ9HBK9 375 aa13.67□□□□□ -0.22
TMEM116-218ENST00000552839 SALL3Q9BXA9 1300 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 CYP2E1P05181 493 aaPredicted RBP13.66□□□□□ -0.22
TMEM116-218ENST00000552839 LDHCP07864 332 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 CCND3P30281 292 aaPredicted RBP13.66□□□□□ -0.22
TMEM116-218ENST00000552839 BACE1P56817 501 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 HERVK_113P62684 666 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 JAG1P78504 1218 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 MDM2Q00987 491 aaPredicted RBP13.66□□□□□ -0.22
TMEM116-218ENST00000552839 CCL14Q16627 93 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 Q3C1V9 767 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 LHX8Q68G74 356 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 NAA16Q6N069 864 aaPredicted RBP13.66□□□□□ -0.22
TMEM116-218ENST00000552839 SOCS4Q8WXH5 440 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 WDR18Q9BV38 432 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 OSBPL3Q9H4L5 887 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 PIH1D3Q9NQM4 214 aaKnown RBP13.66□□□□□ -0.22
TMEM116-218ENST00000552839 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
TMEM116-218ENST00000552839 A0A0C4DFX4 3053 aa13.65□□□□□ -0.22
TMEM116-218ENST00000552839 FOCADQ5VW36 1801 aa13.65□□□□□ -0.22
TMEM116-218ENST00000552839 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
TMEM116-218ENST00000552839 CASC1Q6TDU7 716 aa13.65□□□□□ -0.22
TMEM116-218ENST00000552839 TRMT44Q8IYL2 757 aaKnown RBP13.65□□□□□ -0.22
TMEM116-218ENST00000552839 MAGEB6Q8N7X4 407 aa13.65□□□□□ -0.22
TMEM116-218ENST00000552839 GPRC5AQ8NFJ5 357 aa13.65□□□□□ -0.22
TMEM116-218ENST00000552839 USP6NLQ92738 828 aa13.65□□□□□ -0.22
TMEM116-218ENST00000552839 EDC3Q96F86 508 aaKnown RBP13.65□□□□□ -0.22
TMEM116-218ENST00000552839 DIAPH3Q9NSV4 1193 aa13.65□□□□□ -0.22
TMEM116-218ENST00000552839 HERC5Q9UII4 1024 aaKnown RBP13.65□□□□□ -0.22
TMEM116-218ENST00000552839 MYO5AQ9Y4I1 1855 aaKnown RBP13.65□□□□□ -0.22
TMEM116-218ENST00000552839 IGSF3O75054 1194 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 ZKSCAN1P17029 563 aaPredicted RBP13.64□□□□□ -0.23
TMEM116-218ENST00000552839 MAPK4P31152 587 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
TMEM116-218ENST00000552839 SLC9C2Q5TAH2 1124 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 POTEEQ6S8J3 1075 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 GPR142Q7Z601 462 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 SKAP1Q86WV1 359 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.64□□□□□ -0.23
TMEM116-218ENST00000552839 TEX11Q8IYF3 940 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 KBTBD3Q8NAB2 608 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 GUCD1Q96NT3 240 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 PORCNQ9H237 461 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 ANTXR1Q9H6X2 564 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 TMOD4Q9NZQ9 345 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 PI4KBQ9UBF8 816 aa13.64□□□□□ -0.23
TMEM116-218ENST00000552839 MYH7P12883 1935 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 C19orf81C9J6K1 198 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 HIP1O00291 1037 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 BAG3O95817 575 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 ASNSP08243 561 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 CYP7A1P22680 504 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 ERVK-9P63128 1117 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 ERVK-24P63145 666 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 MORN1Q5T089 497 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 FAM109BQ6ICB4 259 aaPredicted RBP13.63□□□□□ -0.23
TMEM116-218ENST00000552839 SH3RF3Q8TEJ3 882 aaPredicted RBP13.63□□□□□ -0.23
TMEM116-218ENST00000552839 FAM161BQ96MY7 647 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 DNAJC18Q9H819 358 aa13.63□□□□□ -0.23
TMEM116-218ENST00000552839 CUL9Q8IWT3 2517 aa13.62□□□□□ -0.23
TMEM116-218ENST00000552839 USP17L10C9JJH3 530 aa13.62□□□□□ -0.23
TMEM116-218ENST00000552839 ZFYP08048 801 aaPredicted RBP13.62□□□□□ -0.23
TMEM116-218ENST00000552839 PDE6AP16499 860 aa13.62□□□□□ -0.23
TMEM116-218ENST00000552839 RGS2P41220 211 aa13.62□□□□□ -0.23
TMEM116-218ENST00000552839 TMED8Q6PL24 325 aaPredicted RBP13.62□□□□□ -0.23
TMEM116-218ENST00000552839 PLEKHH3Q7Z736 793 aa13.62□□□□□ -0.23
TMEM116-218ENST00000552839 APBA2Q99767 749 aa13.62□□□□□ -0.23
TMEM116-218ENST00000552839 PAGR1Q9BTK6 254 aa13.62□□□□□ -0.23
TMEM116-218ENST00000552839 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
TMEM116-218ENST00000552839 LTBP2Q14767 1821 aa13.62□□□□□ -0.23
TMEM116-218ENST00000552839 GDF11O95390 407 aa13.61□□□□□ -0.23
TMEM116-218ENST00000552839 BMP2KLQ5H9B9 411 aa13.61□□□□□ -0.23
TMEM116-218ENST00000552839 METTL16Q86W50 562 aaKnown RBP13.61□□□□□ -0.23
TMEM116-218ENST00000552839 CCAR1Q8IX12 1150 aaKnown RBP13.61□□□□□ -0.23
TMEM116-218ENST00000552839 TGFBRAP1Q8WUH2 860 aa13.61□□□□□ -0.23
TMEM116-218ENST00000552839 SENP6Q9GZR1 1112 aaPredicted RBP13.61□□□□□ -0.23
TMEM116-218ENST00000552839 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
TMEM116-218ENST00000552839 AATFQ9NY61 560 aaKnown RBP eCLIP13.61□□□□□ -0.23
TMEM116-218ENST00000552839 ZNF532Q9HCE3 1301 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms