RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 BACE1P56817 501 aa16.97■□□□□ 0.31
SNRPF-203ENST00000551316 ATP2B2Q01814 1243 aa16.97■□□□□ 0.31
SNRPF-203ENST00000551316 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
SNRPF-203ENST00000551316 WDR78Q5VTH9 848 aa16.97■□□□□ 0.31
SNRPF-203ENST00000551316 LENG1Q96BZ8 264 aaPredicted RBP16.97■□□□□ 0.31
SNRPF-203ENST00000551316 TMEM39AQ9NV64 488 aa16.97■□□□□ 0.31
SNRPF-203ENST00000551316 ADAMTS8Q9UP79 889 aa16.97■□□□□ 0.31
SNRPF-203ENST00000551316 ZNFX1Q9P2E3 1918 aaKnown RBP16.97■□□□□ 0.31
SNRPF-203ENST00000551316 KIF16BQ96L93 1317 aa16.96■□□□□ 0.31
SNRPF-203ENST00000551316 EPOPA6NHQ4 379 aa16.96■□□□□ 0.31
SNRPF-203ENST00000551316 TBC1D12O60347 775 aa16.96■□□□□ 0.31
SNRPF-203ENST00000551316 LDHBP07195 334 aaKnown RBP16.96■□□□□ 0.31
SNRPF-203ENST00000551316 RHBDL3P58872 404 aa16.96■□□□□ 0.31
SNRPF-203ENST00000551316 TBX21Q9UL17 535 aa16.96■□□□□ 0.31
SNRPF-203ENST00000551316 MYBBP1AQ9BQG0 1328 aaKnown RBP16.96■□□□□ 0.3
SNRPF-203ENST00000551316 DMDP11532 3685 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
SNRPF-203ENST00000551316 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 SLC15A5A6NIM6 579 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 SEPT4O43236 478 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 CSF2RAP15509 400 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 ZEB1P37275 1124 aaPredicted RBP16.95■□□□□ 0.3
SNRPF-203ENST00000551316 BTDP43251 543 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 RABGGTBP53611 331 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 AAK1Q2M2I8 961 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 ZNF365Q70YC5 407 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 CCAR1Q8IX12 1150 aaKnown RBP16.95■□□□□ 0.3
SNRPF-203ENST00000551316 SLC44A5Q8NCS7 719 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 ZNF384Q8TF68 577 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 TSPYL2Q9H2G4 693 aaPredicted RBP16.95■□□□□ 0.3
SNRPF-203ENST00000551316 DNAJC18Q9H819 358 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 BTBD7Q9P203 1132 aa16.95■□□□□ 0.3
SNRPF-203ENST00000551316 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
SNRPF-203ENST00000551316 ANKRD44Q8N8A2 993 aa16.94■□□□□ 0.3
SNRPF-203ENST00000551316 UIMC1Q96RL1 719 aa16.94■□□□□ 0.3
SNRPF-203ENST00000551316 WDR18Q9BV38 432 aa16.94■□□□□ 0.3
SNRPF-203ENST00000551316 CWC22Q9HCG8 908 aaKnown RBP16.94■□□□□ 0.3
SNRPF-203ENST00000551316 EMILIN3Q9NT22 766 aa16.94■□□□□ 0.3
SNRPF-203ENST00000551316 MTCH2Q9Y6C9 303 aa16.94■□□□□ 0.3
SNRPF-203ENST00000551316 PTPRSQ13332 1948 aa16.94■□□□□ 0.3
SNRPF-203ENST00000551316 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
SNRPF-203ENST00000551316 APAF1O14727 1248 aa16.93■□□□□ 0.3
SNRPF-203ENST00000551316 TIMP1P01033 207 aa16.93■□□□□ 0.3
SNRPF-203ENST00000551316 PUM3Q15397 648 aaKnown RBP16.93■□□□□ 0.3
SNRPF-203ENST00000551316 TMOD4Q9NZQ9 345 aa16.93■□□□□ 0.3
SNRPF-203ENST00000551316 SALL1Q9NSC2 1324 aa16.93■□□□□ 0.3
SNRPF-203ENST00000551316 PGK1P00558 417 aa16.92■□□□□ 0.3
SNRPF-203ENST00000551316 RAB30Q15771 203 aa16.92■□□□□ 0.3
SNRPF-203ENST00000551316 MFSD5Q6N075 450 aa16.92■□□□□ 0.3
SNRPF-203ENST00000551316 HERVK_113Q902F9 699 aa16.92■□□□□ 0.3
SNRPF-203ENST00000551316 TBC1D2Q9BYX2 928 aa16.92■□□□□ 0.3
SNRPF-203ENST00000551316 BICC1Q9H694 974 aaKnown RBP16.92■□□□□ 0.3
SNRPF-203ENST00000551316 SLC28A3Q9HAS3 691 aa16.92■□□□□ 0.3
SNRPF-203ENST00000551316 GDF11O95390 407 aa16.91■□□□□ 0.3
SNRPF-203ENST00000551316 NBPF7P0C2Y1 421 aaPredicted RBP16.91■□□□□ 0.3
SNRPF-203ENST00000551316 ANKRD33Q7Z3H0 272 aa16.91■□□□□ 0.3
SNRPF-203ENST00000551316 AS3MTQ9HBK9 375 aa16.91■□□□□ 0.3
SNRPF-203ENST00000551316 MSRAQ9UJ68 235 aa16.91■□□□□ 0.3
SNRPF-203ENST00000551316 ZFHX4Q86UP3 3567 aa16.91■□□□□ 0.3
SNRPF-203ENST00000551316 COL11A1P12107 1806 aaPredicted RBP16.91■□□□□ 0.3
SNRPF-203ENST00000551316 COBLO75128 1261 aa16.9■□□□□ 0.3
SNRPF-203ENST00000551316 ARHGEF15O94989 841 aa16.9■□□□□ 0.3
SNRPF-203ENST00000551316 IFIT1P09914 478 aaKnown RBP16.9■□□□□ 0.3
SNRPF-203ENST00000551316 PHKA1P46020 1223 aa16.9■□□□□ 0.3
SNRPF-203ENST00000551316 IRX5P78411 483 aaPredicted RBP16.9■□□□□ 0.3
SNRPF-203ENST00000551316 PPP2R2DQ66LE6 453 aa16.9■□□□□ 0.3
SNRPF-203ENST00000551316 CERS4Q9HA82 394 aa16.9■□□□□ 0.3
SNRPF-203ENST00000551316 RABGAP1Q9Y3P9 1069 aa16.9■□□□□ 0.3
SNRPF-203ENST00000551316 MROH7-TTC4A0A0A0MT08 1334 aa16.9■□□□□ 0.3
SNRPF-203ENST00000551316 SCN5AQ14524 2016 aa16.89■□□□□ 0.29
SNRPF-203ENST00000551316 ADORA2AP29274 412 aa16.89■□□□□ 0.29
SNRPF-203ENST00000551316 PPIGQ13427 754 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNRPF-203ENST00000551316 ZYXQ15942 572 aaKnown RBP16.89■□□□□ 0.29
SNRPF-203ENST00000551316 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
SNRPF-203ENST00000551316 OLFML2BQ68BL8 750 aa16.89■□□□□ 0.29
SNRPF-203ENST00000551316 SPRED2Q7Z698 418 aa16.89■□□□□ 0.29
SNRPF-203ENST00000551316 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
SNRPF-203ENST00000551316 XPNPEP3Q9NQH7 507 aa16.89■□□□□ 0.29
SNRPF-203ENST00000551316 ZFHX2Q9C0A1 2572 aaPredicted RBP16.88■□□□□ 0.29
SNRPF-203ENST00000551316 UMODL1Q5DID0 1318 aa16.88■□□□□ 0.29
SNRPF-203ENST00000551316 KMT2EQ8IZD2 1858 aa16.88■□□□□ 0.29
SNRPF-203ENST00000551316 MYO5AQ9Y4I1 1855 aaKnown RBP16.87■□□□□ 0.29
SNRPF-203ENST00000551316 USP17L10C9JJH3 530 aa16.87■□□□□ 0.29
SNRPF-203ENST00000551316 TAL1P17542 331 aaPredicted RBP16.87■□□□□ 0.29
SNRPF-203ENST00000551316 WDR43Q15061 677 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNRPF-203ENST00000551316 C9orf78Q9NZ63 289 aaPredicted RBP16.87■□□□□ 0.29
SNRPF-203ENST00000551316 MYADML2A6NDP7 307 aa16.86■□□□□ 0.29
SNRPF-203ENST00000551316 SPDYE16A6NNV3 312 aaPredicted RBP16.86■□□□□ 0.29
SNRPF-203ENST00000551316 ADAMTS4O75173 837 aa16.86■□□□□ 0.29
SNRPF-203ENST00000551316 GLRX3O76003 335 aaKnown RBP16.86■□□□□ 0.29
SNRPF-203ENST00000551316 SLC5A1P13866 664 aa16.86■□□□□ 0.29
SNRPF-203ENST00000551316 PSRC1Q6PGN9 363 aaPredicted RBP16.86■□□□□ 0.29
SNRPF-203ENST00000551316 DZIP1Q86YF9 867 aaKnown RBP16.86■□□□□ 0.29
SNRPF-203ENST00000551316 GTF3C2Q8WUA4 911 aaPredicted RBP16.86■□□□□ 0.29
SNRPF-203ENST00000551316 VWCEQ96DN2 955 aa16.86■□□□□ 0.29
SNRPF-203ENST00000551316 TOX2Q96NM4 488 aa16.86■□□□□ 0.29
SNRPF-203ENST00000551316 ZBTB21Q9ULJ3 1066 aa16.86■□□□□ 0.29
SNRPF-203ENST00000551316 COG5Q9UP83 839 aa16.86■□□□□ 0.29
SNRPF-203ENST00000551316 IVNS1ABPQ9Y6Y0 642 aa16.86■□□□□ 0.29
SNRPF-203ENST00000551316 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms