RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 IFNL3Q8IZI9 196 aa14.13□□□□□ -0.15
RAB5C-204ENST00000547517 ACER1Q8TDN7 264 aa14.13□□□□□ -0.15
RAB5C-204ENST00000547517 NAPBQ9H115 298 aa14.13□□□□□ -0.15
RAB5C-204ENST00000547517 HELLSQ9NRZ9 838 aa14.13□□□□□ -0.15
RAB5C-204ENST00000547517 FOXP2O15409 715 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 OSBPP22059 807 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 IRX3P78415 501 aaPredicted RBP14.12□□□□□ -0.15
RAB5C-204ENST00000547517 LACTBP83111 547 aaPredicted RBP14.12□□□□□ -0.15
RAB5C-204ENST00000547517 ICA1Q05084 483 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 PABPC4Q13310 644 aaKnown RBP eCLIP14.12□□□□□ -0.15
RAB5C-204ENST00000547517 KIF22Q14807 665 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 PKN2Q16513 984 aaKnown RBP14.12□□□□□ -0.15
RAB5C-204ENST00000547517 MCMDC2Q4G0Z9 681 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 TTC22Q5TAA0 569 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 VPS53Q5VIR6 699 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 USP17L2Q6R6M4 530 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 ZNF589Q86UQ0 364 aaPredicted RBP14.12□□□□□ -0.15
RAB5C-204ENST00000547517 CCDC17Q96LX7 622 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 ARHGAP39Q9C0H5 1083 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 EFCC1Q9HA90 598 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 DIAPH3Q9NSV4 1193 aa14.12□□□□□ -0.15
RAB5C-204ENST00000547517 BCRP11274 1271 aa14.11□□□□□ -0.15
RAB5C-204ENST00000547517 GSPT1P15170 499 aaKnown RBP14.11□□□□□ -0.15
RAB5C-204ENST00000547517 SDSP20132 328 aa14.11□□□□□ -0.15
RAB5C-204ENST00000547517 PPARAQ07869 468 aa14.11□□□□□ -0.15
RAB5C-204ENST00000547517 KIAA1683Q9H0B3 1180 aa14.11□□□□□ -0.15
RAB5C-204ENST00000547517 ASCC2Q9H1I8 757 aaPredicted RBP14.11□□□□□ -0.15
RAB5C-204ENST00000547517 MKNK2Q9HBH9 465 aa14.11□□□□□ -0.15
RAB5C-204ENST00000547517 EMILIN3Q9NT22 766 aa14.11□□□□□ -0.15
RAB5C-204ENST00000547517 CCDC171Q6TFL3 1326 aa14.11□□□□□ -0.15
RAB5C-204ENST00000547517 HTTP42858 3142 aa14.1□□□□□ -0.15
RAB5C-204ENST00000547517 CCDC85CA6NKD9 419 aa14.1□□□□□ -0.15
RAB5C-204ENST00000547517 VCAM1P19320 739 aa14.1□□□□□ -0.15
RAB5C-204ENST00000547517 RASA1P20936 1047 aa14.1□□□□□ -0.15
RAB5C-204ENST00000547517 USP14P54578 494 aa14.1□□□□□ -0.15
RAB5C-204ENST00000547517 FBXO46Q6PJ61 603 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-204ENST00000547517 TICAM2Q86XR7 235 aa14.1□□□□□ -0.15
RAB5C-204ENST00000547517 ANKRD13CQ8N6S4 541 aa14.1□□□□□ -0.15
RAB5C-204ENST00000547517 C12orf42Q96LP6 360 aa14.1□□□□□ -0.15
RAB5C-204ENST00000547517 HPS5Q9UPZ3 1129 aa14.1□□□□□ -0.15
RAB5C-204ENST00000547517 A0A1W2PRG0 241 aa14.09□□□□□ -0.15
RAB5C-204ENST00000547517 PRDM1O75626 825 aa14.09□□□□□ -0.15
RAB5C-204ENST00000547517 NEFLP07196 543 aa14.09□□□□□ -0.15
RAB5C-204ENST00000547517 CTGFP29279 349 aa14.09□□□□□ -0.15
RAB5C-204ENST00000547517 ATP2B2Q01814 1243 aa14.09□□□□□ -0.15
RAB5C-204ENST00000547517 ARHGEF6Q15052 776 aa14.09□□□□□ -0.15
RAB5C-204ENST00000547517 CWC27Q6UX04 472 aaKnown RBP14.09□□□□□ -0.15
RAB5C-204ENST00000547517 CENPQQ7L2Z9 268 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-204ENST00000547517 ARHGEF10LQ9HCE6 1279 aa14.09□□□□□ -0.15
RAB5C-204ENST00000547517 GREB1LQ9C091 1923 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-204ENST00000547517 HIP1O00291 1037 aa14.08□□□□□ -0.16
RAB5C-204ENST00000547517 FMNL1O95466 1100 aaPredicted RBP14.08□□□□□ -0.16
RAB5C-204ENST00000547517 SLC3A2P08195 630 aaKnown RBP14.08□□□□□ -0.16
RAB5C-204ENST00000547517 HOXA7P31268 230 aaPredicted RBP14.08□□□□□ -0.16
RAB5C-204ENST00000547517 PSMC4P43686 418 aa14.08□□□□□ -0.16
RAB5C-204ENST00000547517 FAM110CQ1W6H9 321 aa14.08□□□□□ -0.16
RAB5C-204ENST00000547517 TRIM47Q96LD4 638 aa14.08□□□□□ -0.16
RAB5C-204ENST00000547517 SH2D4AQ9H788 454 aa14.08□□□□□ -0.16
RAB5C-204ENST00000547517 ZNF287Q9HBT7 754 aa14.08□□□□□ -0.16
RAB5C-204ENST00000547517 PTPN22Q9Y2R2 807 aa14.08□□□□□ -0.16
RAB5C-204ENST00000547517 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
RAB5C-204ENST00000547517 EEF2P13639 858 aaKnown RBP14.07□□□□□ -0.16
RAB5C-204ENST00000547517 GCLCP48506 637 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-204ENST00000547517 MFAP1P55081 439 aaKnown RBP14.07□□□□□ -0.16
RAB5C-204ENST00000547517 FCGRTP55899 365 aa14.07□□□□□ -0.16
RAB5C-204ENST00000547517 HERVK_113P62684 666 aa14.07□□□□□ -0.16
RAB5C-204ENST00000547517 CTDSPL2Q05D32 466 aa14.07□□□□□ -0.16
RAB5C-204ENST00000547517 PDE4BQ07343 736 aa14.07□□□□□ -0.16
RAB5C-204ENST00000547517 ZNF444Q8N0Y2 327 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-204ENST00000547517 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.07□□□□□ -0.16
RAB5C-204ENST00000547517 RPAP3Q9H6T3 665 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-204ENST00000547517 KANSL2Q9H9L4 492 aa14.07□□□□□ -0.16
RAB5C-204ENST00000547517 PTCH2Q9Y6C5 1203 aa14.07□□□□□ -0.16
RAB5C-204ENST00000547517 USP17L15C9J2P7 530 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 USP17L13C9JLJ4 530 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 USP17L11C9JVI0 530 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 USP17L18D6R9N7 530 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 USP17L22D6RA61 530 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 USP17L17D6RBQ6 530 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 USP17L19D6RCP7 530 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 USP17L20D6RJB6 530 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 USP17L24Q0WX57 530 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 ALX1Q15699 326 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 KIAA1755Q5JYT7 1200 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 SKAP1Q86WV1 359 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 SIAH1Q8IUQ4 282 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 SPICE1Q8N0Z3 855 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 P2RX7Q99572 595 aaKnown RBP14.06□□□□□ -0.16
RAB5C-204ENST00000547517 PAGR1Q9BTK6 254 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 TANGO6Q9C0B7 1094 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 ZMYM6O95789 1325 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 PLIN4Q96Q06 1357 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 MGAMO43451 1857 aa14.06□□□□□ -0.16
RAB5C-204ENST00000547517 TNPO2O14787 897 aaKnown RBP14.05□□□□□ -0.16
RAB5C-204ENST00000547517 RAD21O60216 631 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 PEX10O60683 326 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 GNRH1P01148 92 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 FGAP02671 866 aa14.05□□□□□ -0.16
RAB5C-204ENST00000547517 TSPY3P0CV98 308 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms