RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 PLEKHA8P1O95397 391 aa18.22■□□□□ 0.51
CACNA2D4-217ENST00000545595 NFIAQ12857 509 aa18.22■□□□□ 0.51
CACNA2D4-217ENST00000545595 RSBN1LQ6PCB5 846 aaPredicted RBP18.22■□□□□ 0.51
CACNA2D4-217ENST00000545595 NEDD1Q8NHV4 660 aa18.22■□□□□ 0.51
CACNA2D4-217ENST00000545595 ZNF396Q96N95 335 aaPredicted RBP18.22■□□□□ 0.51
CACNA2D4-217ENST00000545595 KAT14Q9H8E8 782 aa18.22■□□□□ 0.51
CACNA2D4-217ENST00000545595 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
CACNA2D4-217ENST00000545595 CNTNAP5Q8WYK1 1306 aa18.22■□□□□ 0.51
CACNA2D4-217ENST00000545595 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
CACNA2D4-217ENST00000545595 GAS2L3Q86XJ1 694 aa18.21■□□□□ 0.51
CACNA2D4-217ENST00000545595 KLHL34Q8N239 644 aa18.21■□□□□ 0.51
CACNA2D4-217ENST00000545595 CCDC82Q8N4S0 544 aa18.21■□□□□ 0.51
CACNA2D4-217ENST00000545595 NLGN2Q8NFZ4 835 aa18.21■□□□□ 0.51
CACNA2D4-217ENST00000545595 CTCFLQ8NI51 663 aaPredicted RBP18.21■□□□□ 0.51
CACNA2D4-217ENST00000545595 SYAP1Q96A49 352 aaPredicted RBP18.21■□□□□ 0.51
CACNA2D4-217ENST00000545595 USP28Q96RU2 1077 aa18.21■□□□□ 0.51
CACNA2D4-217ENST00000545595 MAP3K14Q99558 947 aa18.21■□□□□ 0.51
CACNA2D4-217ENST00000545595 FTOQ9C0B1 505 aaKnown RBP eCLIP18.21■□□□□ 0.51
CACNA2D4-217ENST00000545595 MMP14P50281 582 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 TRIM29Q14134 588 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 PNMA1Q8ND90 353 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 AGBL3Q8NEM8 1001 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 IDI2Q9BXS1 227 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 PSMD14O00487 310 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 PRPF3O43395 683 aaKnown RBP18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 RBM5P52756 815 aaKnown RBP eCLIP18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 PKN1Q16512 942 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 MYSM1Q5VVJ2 828 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 ILDR2Q71H61 639 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 JDP2Q8WYK2 163 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 RCOR1Q9UKL0 485 aa18.2■□□□□ 0.5
CACNA2D4-217ENST00000545595 U2AF2P26368 475 aaKnown RBP eCLIP18.19■□□□□ 0.5
CACNA2D4-217ENST00000545595 NOVP48745 357 aa18.19■□□□□ 0.5
CACNA2D4-217ENST00000545595 SRBD1Q8N5C6 995 aaKnown RBP18.19■□□□□ 0.5
CACNA2D4-217ENST00000545595 PGBD1Q96JS3 809 aa18.19■□□□□ 0.5
CACNA2D4-217ENST00000545595 EHD4Q9H223 541 aa18.19■□□□□ 0.5
CACNA2D4-217ENST00000545595 FAM198AQ9UFP1 575 aa18.19■□□□□ 0.5
CACNA2D4-217ENST00000545595 SWAP70Q9UH65 585 aa18.19■□□□□ 0.5
CACNA2D4-217ENST00000545595 SERPINB13Q9UIV8 391 aa18.19■□□□□ 0.5
CACNA2D4-217ENST00000545595 TAOK2Q9UL54 1235 aa18.19■□□□□ 0.5
CACNA2D4-217ENST00000545595 RAD17O75943 681 aa18.18■□□□□ 0.5
CACNA2D4-217ENST00000545595 MMP1P03956 469 aa18.18■□□□□ 0.5
CACNA2D4-217ENST00000545595 CACNB3P54284 484 aa18.18■□□□□ 0.5
CACNA2D4-217ENST00000545595 GRM4Q14833 912 aa18.18■□□□□ 0.5
CACNA2D4-217ENST00000545595 CFAP100Q494V2 611 aa18.18■□□□□ 0.5
CACNA2D4-217ENST00000545595 CCDC183Q5T5S1 534 aa18.18■□□□□ 0.5
CACNA2D4-217ENST00000545595 L1TD1Q5T7N2 865 aaKnown RBP18.18■□□□□ 0.5
CACNA2D4-217ENST00000545595 ZFPM1Q8IX07 1006 aa18.18■□□□□ 0.5
CACNA2D4-217ENST00000545595 TMEM47Q9BQJ4 181 aa18.18■□□□□ 0.5
CACNA2D4-217ENST00000545595 RTEL1Q9NZ71 1219 aa18.18■□□□□ 0.5
CACNA2D4-217ENST00000545595 BAZ2BQ9UIF8 2168 aaKnown RBP18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 HLA-DOAP06340 250 aa18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 KIF5BP33176 963 aa18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 AKAP17AQ02040 695 aaKnown RBP18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 CEBPZQ03701 1054 aaKnown RBP18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 CXCL9Q07325 125 aa18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 TPRNQ4KMQ1 711 aa18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 SHISA4Q96DD7 197 aa18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 COL2A1P02458 1487 aaPredicted RBP18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 MYH4Q9Y623 1939 aa18.17■□□□□ 0.5
CACNA2D4-217ENST00000545595 SYCE3A1L190 88 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 SHMT1P34896 483 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 MTMR14Q8NCE2 650 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 CEP95Q96GE4 821 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 POLR3EQ9NVU0 708 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 HDAC9Q9UKV0 1011 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 STX8Q9UNK0 236 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 IGKV6D-41A0A0C4DH26 115 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 AKR1B1P15121 316 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 NASPP49321 788 aaPredicted RBP18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 CIAPIN1Q6FI81 312 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 FHDC1Q9C0D6 1143 aaPredicted RBP18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 DHX36Q9H2U1 1008 aaKnown RBP18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 MAD2L2Q9UI95 211 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 KCNJ14Q9UNX9 436 aa18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 V9GY48 417 aaPredicted RBP18.16■□□□□ 0.5
CACNA2D4-217ENST00000545595 ATRNL1Q5VV63 1379 aa18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 GOLGA6L4A6NEF3 574 aa18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 YEATS4O95619 227 aa18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 LIG1P18858 919 aa18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 TNIP1Q15025 636 aa18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 LRSAM1Q6UWE0 723 aa18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 SH3BP5LQ7L8J4 393 aa18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 DIS3L2Q8IYB7 885 aaKnown RBP18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 OGFOD1Q8N543 542 aa18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 TDRD3Q9H7E2 651 aaKnown RBP18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 DNAJC18Q9H819 358 aa18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 CLIC4Q9Y696 253 aa18.15■□□□□ 0.5
CACNA2D4-217ENST00000545595 hCG_1642624A0A1W2PR95 340 aa18.14■□□□□ 0.49
CACNA2D4-217ENST00000545595 DDTLA6NHG4 134 aaPredicted RBP18.14■□□□□ 0.49
CACNA2D4-217ENST00000545595 FZD9O00144 591 aa18.14■□□□□ 0.49
CACNA2D4-217ENST00000545595 TOP1P11387 765 aaKnown RBP18.14■□□□□ 0.49
CACNA2D4-217ENST00000545595 RPS12P25398 132 aaKnown RBP18.14■□□□□ 0.49
CACNA2D4-217ENST00000545595 MRE11P49959 708 aa18.14■□□□□ 0.49
CACNA2D4-217ENST00000545595 TCP10Q12799 353 aa18.14■□□□□ 0.49
CACNA2D4-217ENST00000545595 GNL2Q13823 731 aaKnown RBP18.14■□□□□ 0.49
CACNA2D4-217ENST00000545595 SAFBQ15424 915 aaKnown RBP eCLIP18.14■□□□□ 0.49
CACNA2D4-217ENST00000545595 STAG2Q8N3U4 1231 aa18.14■□□□□ 0.49
CACNA2D4-217ENST00000545595 LINC00301Q8NCQ3 95 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms