RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CBX1P83916 185 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 MYL5Q02045 173 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 NAA30Q147X3 362 aaPredicted RBP5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 TMEM67Q5HYA8 995 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 AKNAD1Q5T1N1 836 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 KRBA2Q6ZNG9 492 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 TMC6Q7Z403 805 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 METTL16Q86W50 562 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 MICU3Q86XE3 530 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 FOXP4Q8IVH2 680 aaPredicted RBP5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 SPATA5Q8NB90 893 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 STAG1Q8WVM7 1258 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 PHKBQ93100 1093 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 FBXW7Q969H0 707 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 PPP1R13BQ96KQ4 1090 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 GTPBP4Q9BZE4 634 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 CNNM2Q9H8M5 875 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 TRMT1Q9NXH9 659 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 OGFRQ9NZT2 677 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 ZSWIM5Q9P217 1185 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 TRMT112Q9UI30 125 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 DDX41Q9UJV9 622 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 ZNF215Q9UL58 517 aaPredicted RBP5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 ZBTB1Q9Y2K1 713 aa5.98□□□□□ -1.45
ATPAF1-212ENST00000542495 CICQ96RK0 1608 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 EP400Q96L91 3159 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 LAMB2P55268 1798 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 CBFA2T2O43439 604 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 MMP1P03956 469 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 APPP05067 770 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 ATP1A3P13637 1013 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 SLC5A1P13866 664 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 GNAT2P19087 354 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 RXRAP19793 462 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 BMP6P22004 513 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 SFPQP23246 707 aaKnown RBP eCLIP5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 LMOD1P29536 600 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 SARSP49591 514 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 SSRP1Q08945 709 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 MAP3K12Q12852 859 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 SF3B2Q13435 895 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 PNOCQ13519 176 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 RASGRF1Q13972 1273 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 TRIM29Q14134 588 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 VPS72Q15906 364 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 LONRF3Q496Y0 759 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 NT5DC1Q5TFE4 455 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 PPP2R2DQ66LE6 453 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 TYW1BQ6NUM6 668 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 PADI6Q6TGC4 694 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 NOSTRINQ8IVI9 506 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 VSTM4Q8IW00 320 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 STK11IPQ8N1F8 1099 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 ZNF397Q8NF99 534 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 WASF1Q92558 559 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 DPF2Q92785 391 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 AIDAQ96BJ3 306 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 PKNOX2Q96KN3 472 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 CLIC6Q96NY7 704 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 NOL10Q9BSC4 688 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 KRT23Q9C075 422 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 FOXP1Q9H334 677 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 INCENPQ9NQS7 918 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 LIMD1Q9UGP4 676 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 FBXO2Q9UK22 296 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 KCNH3Q9ULD8 1083 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 SLC12A7Q9Y666 1083 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 WNK3Q9BYP7 1800 aa5.97□□□□□ -1.45
ATPAF1-212ENST00000542495 COL14A1Q05707 1796 aaKnown RBP5.96□□□□□ -1.45
ATPAF1-212ENST00000542495 UBE2Q2LH0YL09 131 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 IFIT3O14879 490 aaKnown RBP5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 CCP110O43303 1012 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 MBD4O95243 580 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 SLU7O95391 586 aaKnown RBP5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 ZNF18P17022 549 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 PTPREP23469 700 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 EIF5P55010 431 aaKnown RBP5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 CTDSPL2Q05D32 466 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 TBX2Q13207 712 aaPredicted RBP5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 NFXL1Q6ZNB6 911 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 C3orf67Q6ZVT6 689 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 FCHSD1Q86WN1 690 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 DZIP3Q86Y13 1208 aaKnown RBP5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 TMEM139Q8IV31 216 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 SEPT12Q8IYM1 358 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 MAGEB6Q8N7X4 407 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 MTMR14Q8NCE2 650 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 SPATA20Q8TB22 786 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 ZNF592Q92610 1267 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 SLC26A6Q9BXS9 759 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 NAPBQ9H115 298 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 ARMT1Q9H993 441 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 INTS13Q9NVM9 706 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 PCDHA5Q9Y5H7 936 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 PHLPP2Q6ZVD8 1323 aa5.96□□□□□ -1.46
ATPAF1-212ENST00000542495 BTBD18B2RXH4 712 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 GUCY1A2P33402 732 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 UBASH3AP57075 661 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 ETF1P62495 437 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 PDE4BQ07343 736 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms